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Publications

Peer-reviewed publications by SoMAS Faculty

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Zheng, C., Kar-Man Chang, E., Kim, H. M., Zhang, M., & Wang, W. (2018). Impacts of the Madden–Julian Oscillation on Storm-Track Activity, Surface Air Temperature, and Precipitation over North America. Journal of Climate, 31(15), 6113-6134.

Thomas, D. M., Lee, C. S., & Fisher, N. S. (2018). Bioaccumulation and trophic transfer of 137 Cs in marine and freshwater plankton. Chemosphere.

Waller R.F., Cleves P.A., Rubio-Brotons M., Woods A., Bender S.J., Edgcomb V., Gann, E.R., Jones, A.C., Teytelman, L., von Dassow, P., Wilhelm, S.W., and Collier, J.L. (2018) Strength in numbers: Collaborative science for new experimental model systems. PLoS Biol 16(7): e2006333. https://doi.org/10.1371/journal.pbio.2006333

Li, X., Doherty, A. C., Brownawell, B., & Lara-Martin, P. A. (2018). Distribution and diagenetic fate of synthetic surfactants and their metabolites in sewage-impacted estuarine sediments. Environmental Pollution.

Phillips, J. M., Bricelj, V. M., Mitch, M., Cerrato, R. M., MacQuarrie, S., & Connell, L. B. (2018). Biogeography of resistance to paralytic shellfish toxins in softshell clam, Mya arenaria (L.), populations along the Atlantic coast of North America. Aquatic Toxicology.

Liou, Y. C., Bluestein, H. B., French, M. M., & Wienhoff, Z. B. (2018). Single-Doppler velocity retrieval of the wind field in a tornadic supercell using mobile, phased-array, Doppler radar data. Journal of Atmospheric and Oceanic Technology, (2018).

Witts, J. D., Landman, N. H., Garb, M. P., Boas, C., Larina, E., Rovelli, R., … & Cochran, J. K. (2018). A fossiliferous spherule-rich bed at the Cretaceous–Paleogene (K–Pg) boundary in Mississippi, USA: Implications for the K–Pg mass extinction event in the Mississippi Embayment and Eastern Gulf Coastal Plain. Cretaceous Research.

Borges, A. V., Speeckaert, G., Champenois, W., Scranton, M. I., & Gypens, N. (2018). Productivity and temperature as drivers of seasonal and spatial variations of dissolved methane in the Southern Bight of the North Sea. Ecosystems, 21(4), 583-599.

Foley, C. M., Hart, T., & Lynch, H. J. (2018). King Penguin populations increase on South Georgia but explanations remain elusive. Polar Biology, 41(6), 1111-1122.

Bassim, S., & Allam, B. (2018). SNP hot-spots in the clam parasite QPX. BMC genomics, 19(1), 486.

Hinrichs, C., Flagg, C.N. & Wilson, R.E. Estuaries and Coasts: Great South Bay After Sandy: Changes in Circulation and Flushing due to New Inlet (2018). https://doi.org/10.1007/s12237-018-0423-6

Pikitch, E. K. (2018). A tool for finding rare marine species. Science, 360(6394), 1180 LP-1182. 

Feng, H., Qian, Y., Cochran, J. K., Zhu, Q., Heilbrun, C., Li, L., … & Nazareski, E. (2018). Seasonal differences in trace element concentrations and distribution in Spartina alterniflora root tissue. Chemosphere, 204, 359-370.

Tonjes, D. J., McElroy, A. E., Barnes-Pohjonen, R. K., Ninivaggi, D. V., Dawydiak, W., Greene, G. T., & Brownawell, B. J. (2018). Fate of methoprene in temperate salt marsh ditches following aerial applications. The Science of the total environment, 642, 394.

Camhi, M. D., E. K. Pikitch and E. A. Babcock, editors. 2008. Sharks of the Open Ocean: Biology, Fisheries and Conservation. Blackwell Publishing, Oxford, UK. 536 p.

Camhi, M. D., E. K. Pikitch and E. A. Babcock, editors. 2008. Sharks of the Open Ocean: Biology, Fisheries and Conservation. Blackwell Publishing, Oxford, UK. 536 p.

Madigan, D. J., Snodgrass, O. E., & Fisher, N. S. (2018). From migrants to mossbacks: tracer-and tag-inferred habitat shifts in the California yellowtail Seriola dorsalis. Marine Ecology Progress Series, 597, 221-230.

Finn, D. and Marshall, J.T. (2018) “Superstorm Sandy at Five: Lessons on Law as Catalyst and Obstacle to Long-Term Recovery Following Catastrophic Disasters.” Environmental Law Reporter News and Analysis. Vol 48. June, 2018. 10494-10519.

Cembella, A. D., Tillmann, U., Gobler, C. J., Morton, S. L., Tomas, C. R., Burkholder, J. M., … & Band‐Schmidt, C. J. (2018). Harmful Algal Species Fact Sheets. Harmful Algal Blooms: A Compendium Desk Reference, 561-638.

Yang, F., Kollias, P., Shaw, R. A., & Vogelmann, A. M. (2018). Cloud droplet size distribution broadening during diffusional growth: ripening amplified by deactivation and reactivation. Atmospheric Chemistry and Physics, 18(10), 7313-7328.

Liu, P. (2018). MJO evolution and predictability disclosed by the RMM variant with balanced MJO variance in convection and zonal winds. Climate Dynamics, 1-15.

Kramer, B. J., Davis, T. W., Meyer, K. A., Rosen, B. H., Goleski, J. A., Dick, G. J., … & Gobler, C. J. (2018). Nitrogen limitation, toxin synthesis potential, and toxicity of cyanobacterial populations in Lake Okeechobee and the St. Lucie River Estuary, Florida, during the 2016 state of emergency event. PloS one, 13(5), e0196278.

Wirth, C., & Warren, J. D. Overlapping use of an artificial reef by humans and an apex predator (Tursiops truncatus) in the New York Bight. Marine Mammal Science.

Landman, N. H., Jicha, B. R., Cochran, J. K., Garb, M. P., Brophy, S. K., Larson, N. L., & Brezina, J. (2018). 40Ar/39Ar date of a bentonite associated with a methane seep deposit in the upper Campanian Baculites compressus Zone, Pierre Shale, South Dakota. Cretaceous Research.

Erickson, M. J., Colle, B. A., & Charney, J. J. (2018). Evaluation and Postprocessing of Ensemble Fire Weather Predictions over the Northeast United States. Journal of Applied Meteorology and Climatology, 57(5), 1135-1153.

Schwaller, M. R., Lynch, H. J., Tarroux, A., & Prehn, B. (2018). A continent-wide search for Antarctic petrel breeding sites with satellite remote sensing. Remote Sensing of Environment, 210, 444-451.

Madigan, D.J., Li, M., Yin, R., Baumann, H., Snodgrass, O.E., Dewar, H., Krabbenhoft, D.P., Baumann, Z., Fisher, N.S., Balcom, P.H. and Sunderland, E.M., (2018). Mercury stable isotopes reveal influence of foraging depth on mercury concentrations and growth in Pacific bluefin tuna. Environmental science & technology.

Ray, R., Michaud, E., Aller, R. C., Vantrepotte, V., Gleixner, G., Walcker, R., … & Thouzeau, G. The sources and distribution of carbon (DOC, POC, DIC) in a mangrove dominated estuary (French Guiana, South America). Biogeochemistry, 1-25.

Youngflesh, C., Jenouvrier, S., Hinke, J. T., DuBois, L., St Leger, J., Trivelpiece, W. Z., … & Lynch, H. J. (2017). Rethinking ‘normal’: The role of stochasticity in the phenology of a synchronously breeding seabird. Journal of Animal Ecology.

Berdalet, E., Kudela, R., Banas, N. S., Bresnan, E., Burford, M. A., Davidson, K., Gobler, C.J. … & Montresor, M. (2018). GlobalHAB: fostering international coordination on harmful algal bloom research in aquatic systems. Global ecology and oceanography of harmful algal blooms. Springer, Cham, 425-447.

Blanton, B., Dresback, K., Colle, B., Kolar, R., Vergara, H., Hong, Y., … & Wachtendorf, T. (2018). An Integrated Scenario Ensemble-Based Framework for Hurricane Evacuation Modeling: Part 2-Hazard Modeling. Risk analysis: an official publication of the Society for Risk Analysis.

Arora, K., Goff, J. A., Wood, L. J., Flood, R. D., & Christensen, B. (2018). Analysis of hummocky bedforms offshore Fire Island, New York, generated by superstorm Sandy. Continental Shelf Research.

Hornstein, J., Espinosa, E. P., Cerrato, R. M., Lwiza, K. M., & Allam, B. (2018). The influence of temperature stress on the physiology of the Atlantic surfclam, Spisula solidissima. Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology.

Wang, J., Kim, H. M., Chang, E. K., & Son, S. W. Modulation of the MJO and North Pacific Storm Track Relationship by the QBO. Journal of Geophysical Research: Atmospheres.

Yang, F., Luke, E. P., Kollias, P., Kostinski, A. B., & Vogelmann, A. M. (2018). Scaling of drizzle virga depth with cloud thickness for marine stratocumulus clouds. Geophysical Research Letters.

Farhadzadeh, A., Arabi, M. G., & Bokuniewicz, H. (2018). Contribution of seiche to beach profile evolution in eastern Lake Erie. Shore & Beach, 86(2), 19.

Chia, M. A., Jankowiak, J. G., Kramer, B. J., Goleski, J. A., Huang, I. S., Zimba, P. V., … & Gobler, C. J. (2018). Succession and toxicity of Microcystis and Anabaena (Dolichospermum) blooms are controlled by nutrient-dependent allelopathic interactions. Harmful Algae, 74, 67-77.

Liu, S., Goff, J. A., Flood, R. D., Christensen, B., & Austin Jr, J. A. (2018). Sorted bedforms off Western Long Island, New York, USA: Asymmetrical morphology and twelve‐year migration record. Sedimentology.

Zhu, J., Zeng, X., Zhang, M., Dai, Y., Ji, D., Li, F., … & Song, X. (2018). Evaluation of the New Dynamic Global Vegetation Model in CAS-ESM. Advances in Atmospheric Sciences, 35(6), 659-670.

Ramesh, K., Melzner, F., Griffith, A. W., Gobler, C. J., Rouger, C., Tasdemir, D., & Nehrke, G. (2018). In vivo characterization of bivalve larval shells: a confocal Raman microscopy study. Journal of The Royal Society Interface, 15(141), 20170723.

Lau, Y. T., Gambino, L., Santos, B., Espinosa, E. P., & Allam, B. (2018). Regulation of oyster (Crassostrea virginica) hemocyte motility by the intracellular parasite Perkinsus marinus: A possible mechanism for host infection. Fish & shellfish immunology.

Yu, H., & Zhang, M. (2018). Explaining the Year‐to‐Year Variability of the Eastern Pacific Intertropical Convergence Zone in the Boreal Spring. Journal of Geophysical Research: Atmospheres, 123(8), 3847-3856.

Yu, H., & Zhang, M. (2018). Explaining the Year‐to‐Year Variability of the Eastern Pacific Inter‐Tropical Convergence Zone (ITCZ) in the Boreal Spring. Journal of Geophysical Research: Atmospheres.

O’Leary, B. C., Ban, N. C., Fernandez, M., Friedlander, A. M., García-Borboroglu, P., Golbuu, Y., … Pikitch, E.K. & McCauley, D. J. (2018). Addressing Criticisms of Large-Scale Marine Protected Areas. BioScience.

Wirth, V., Riemer, M., Chang, E. K., & Martius, O. (2018). Rossby Wave Packets on the Midlatitude Waveguide—A Review. Monthly Weather Review, (2018).

Earle, S. A., Wright, D. J., Joye, S., Laffoley, D., Baxter, J., Safina, C., & Elkus, P. (2018). Ocean deoxygenation: Time for action. Science, 359(6383), 1475-1476.

Hartman, R., Espinosa, E. P., & Allam, B. (2018). Identification of clam plasma proteins that bind its pathogen Quahog Parasite Unknown. Fish & Shellfish Immunology, 77, 214-221.

Davidson, R. A., Nozick, L. K., Wachtendorf, T., Blanton, B., Colle, B., Kolar, R. L., … & Leonardo, N. (2018). An Integrated Scenario Ensemble‐Based Framework for Hurricane Evacuation Modeling: Part 1—Decision Support System. Risk analysis.

Zhang, D., Wang, Z., Kollias, P., Vogelmann, A. M., Yang, K., & Luo, T. (2018). Ice particle production in mid-level stratiform mixed-phase clouds observed with collocated A-Train measurements. Atmospheric Chemistry and Physics, 18(6), 4317-4327.

Erickson, M. J., Colle, B. A., & Charney, J. J. (2018). Evaluation and Post-Processing of Ensemble Fire Weather Predictions over the Northeast United States. Journal of Applied Meteorology and Climatology, (2018).

Gobler, C. J., Merlo, L. R., Morrell, B. K., & Griffith, A. W. (2018). Temperature, Acidification, and Food Supply Interact to Negatively Affect the Growth and Survival of the Forage Fish, Menidia beryllina (Inland Silverside), and Cyprinodon variegatus (Sheepshead Minnow). Frontiers in Marine Science, 5, 86.

Urmy, S. S., & Warren, J. D. (2018). Foraging hotspots of common and roseate terns: the influence of tidal currents, bathymetry, and prey density. Marine Ecology Progress Series, 590, 227-245.

Chi, L., Wolfe, C. L., & Hameed, S. (2018). Intercomparison of the Gulf Stream in ocean reanalyses: 1993− 2010. Ocean Modelling, 125, 1-21.

Wang, J., Kim, H.-M. & Chang, E. K. M. (2018). Interannual Modulation of Northern Hemisphere Winter Storm Tracks by the QBO. Geophysical Research Letters, 45. https://doi.org/10.1002/2017GL076929

Chi, L., Wolfe, C. L., & Hameed, S. (2018). Intercomparison of the Gulf Stream in Ocean Reanalyses: 1993− 2010. Ocean Modelling.

Lau, Y. T., Gambino, L., Santos, B., Espinosa, E. P., & Allam, B. (2018). Transepithelial migration of mucosal hemocytes in Crassostrea virginica and potential role in Perkinsus marinus pathogenesis. Journal of invertebrate pathology, 153, 122-129.

Wing, A. A., Reed, K. A., Satoh, M., Stevens, B., Bony, S., & Ohno, T. (2018). Radiative–convective equilibrium model intercomparison project. Geoscientific Model Development, 11(2), 793.

Oue, M., Kollias, P., Ryzhkov, A., & Luke, E. P. (2018). Toward Exploring the Synergy Between Cloud Radar Polarimetry and Doppler Spectral Analysis in Deep Cold Precipitating Systems in the Arctic. Journal of Geophysical Research: Atmospheres.

Gobler, C. J., Merlo, L. R., Morell, B. K., & Griffith, A. W. (2018). Temperature, acidification, and food supply interact to negatively affect the growth and survival of the forage fish, Menidia beryllina (inland silverside) and Cyprinodon variegatus (sheepshead minnow). Frontiers in Marine Science, 5, 86.

Wehner, M. F., Reed, K. A., Loring, B., Stone, D., & Krishnan, H. (2018). Changes in tropical cyclones under stabilized 1.5 and 2.0° C global warming scenarios as simulated by the Community Atmospheric Model under the HAPPI protocols. Earth System Dynamics, 9(1), 187.

Isaacman-VanWertz, G., Massoli, P., O’Brien, R., Lim, C., Franklin, J.P., Moss, J.A., Hunter, J.F., Nowak, J.B., Canagaratna, M.R., Misztal, P.K., Su, L., Knopf, D.A., and Arata, C.,  (2018). Chemical evolution of atmospheric organic carbon over multiple generations of oxidation. Nature Chemistry, p.1.

Dvarskas, A. (2018). Mapping ecosystem services supply chains for coastal Long Island communities: Implications for resilience planning. Ecosystem Services, 30, 14-26.

Shipley, O. N., Murchie, K. J., Frisk, M. G., O’Shea, O. R., Winchester, M. M., Brooks, E. J., … & Power, M. Trophic niche dynamics of three nearshore benthic predators in The Bahamas. Hydrobiologia, 1-12.

Madigan, D. J., Baumann, Z., Carlisle, A. B., Snodgrass, O., Dewar, H., & Fisher, N. S. (2018). Isotopic insights into migration patterns of Pacific bluefin tuna in the eastern Pacific Ocean. Canadian Journal of Fisheries and Aquatic Sciences, (999), 1-11.

Pochron, S., Nikakis, J., Illuzzi, K. et al. (2018). Exposure to aged crumb rubber reduces survival time during a stress test in earthworms (Eisenia fetida). Environ Sci Pollut Res (2018). https://doi.org/10.1007/s11356-018-1433-4

Espinosa, E. P., & Allam, B. (2018). Reverse genetics demonstrate the role of mucosal C-type lectins in food particle selection in the oyster Crassostrea virginica. Journal of Experimental Biology, jeb-174094.

Herrington, A. R., & Reed, K. A. (2018). An Idealized Test of the Response of the Community Atmosphere Model to Near‐Grid‐Scale Forcing Across Hydrostatic Resolutions. Journal of Advances in Modeling Earth Systems, 10(2), 560-575.

Grzelak, K., Tamborski, J., Kotwicki, L., & Bokuniewicz, H. (2018). Ecostructuring of marine nematode communities by submarine groundwater discharge. Marine Environmental Research, 136, 106-119.

Schrimpf, M., Naveen, R., & Lynch, H. J. (2018). Population status of the Antarctic shag Phalacrocorax (atriceps) bransfieldensis. Antarctic Science, 1-9.

Lucca, B. M., & Warren, J. D. (2018). Acoustically Measured Distribution and Abundance of Atlantic Menhaden (Brevoortia tyrannus) in a Shallow Estuary in Long Island, NY. Estuaries and Coasts, 1-12.

Smirnov, O., Steinwand, M. C., Xiao, T., & Zhang, M. (2018). Climate Impacts, Political Institutions, and Leader Survival: Effects of Droughts and Flooding Precipitation. Economics of Disasters and Climate Change, 1-21.

Alexander, M. A., Scott, J. D., Friedland, K. D., Mills, K. E., Nye, J. A., Pershing, A. J., & Thomas, A. C. (2018). Projected sea surface temperatures over the 21st century: Changes in the mean, variability and extremes for large marine ecosystem regions of Northern Oceans. Elem Sci Anth, 6(1), 9. DOI: http://doi.org/10.1525/elementa.191

Dasgupta, S., Choyke, S., Ferguson, P. L., & McElroy, A. E. (2018). Antioxidant responses and oxidative stress in sheepshead minnow larvae exposed to Corexit 9500® or its component surfactant, DOSS. Aquatic Toxicology, 194, 10-17.

Zhang, Y., Xie, S., Klein, S. A., Marchand, R., Kollias, P., Clothiaux, E. E., … & Tang, S. (2018). The ARM Cloud Radar Simulator for Global Climate Models: A New Tool for Bridging Field Data and Climate Models. Bulletin of the American Meteorological Society, (2017).

Knopf, D. A., Alpert, P. A., Wang, B., The Role of Organic Aerosol in Atmospheric Ice Nucleation: A Review. ACS Earth Space Chem., Article ASAP DOI: 10.1021/acsearthspacechem.7b00120.

Hattenrath-Lehmann, T. K., Lusty, M. W., Wallace, R. B., Haynes, B., Wang, Z., Broadwater, M., … Chytalo, K. & Gobler, C. J. (2018). Evaluation of Rapid, Early Warning Approaches to Track Shellfish Toxins Associated with Dinophysis and Alexandrium Blooms. Marine Drugs, 16(1), 28.

Zhou, X., Ackerman, A. S., Fridlind, A. M., & Kollias, P. (2018). Simulation of mesoscale cellular convection in marine stratocumulus. Part I: Drizzling conditions. Journal of the Atmospheric Sciences, (2017).

Flanagan, A. M., Flood, R. D., Frisk, M. G., Garza, C. D., Lopez, G. R., Maher, N. P. & Cerrato, R. M. (2018). The relationship between observational scale and explained variance in benthic communities. PLoS ONE, 13(1), e0189313.

Chen, J., Liu, Y., Zhang, M., & Peng, Y. (2018). Height Dependency of Aerosol‐Cloud Interaction Regimes. Journal of Geophysical Research: Atmospheres, 123(1), 491-506.

Korfe, N. G., & Colle, B. A. (2018). Evaluation of Cool-Season Extratropical Cyclones in a Multimodel Ensemble for Eastern North America and the Western Atlantic Ocean. Weather and Forecasting, 33(1), 109-127.

Gurr, S. J., Goleski, J., Lima, F. P., Seabra, R., Gobler, C. J., & Volkenborn, N. (2018). Cardiac responses of the bay scallop Argopecten irradians to diel-cycling hypoxia. Journal of Experimental Marine Biology and Ecology, 500, 18-29.

Rémillard, J., Fridlind, A. M., Ackerman, A. S., Tselioudis, G., Kollias, P., Mechem, D. B., … & Chuang, P. Y. (2017). Use of cloud radar Doppler spectra to evaluate stratocumulus drizzle size distributions in large-eddy simulations with size-resolved microphysics. Journal of Applied Meteorology and Climatology, 56(12), 3263-3283.

Chen, J., Liu, Y., Zhang, M., & Peng, Y. (2017). Height Dependency of Aerosol‐Cloud Interaction Regimes. Journal of Geophysical Research: Atmospheres.

Snelgrove, P.V., Soetaert, K., Solan, M., Thrush, S., Wei, C.L., Danovaro, R., Fulweiler, R.W., Kitazato, H., Ingole, B., Norkko, A., Parkes, R.J. and Volkenborn, N., (2017). Global Carbon Cycling on a Heterogeneous Seafloor. Trends in ecology & evolution.

Suter EA, Pachiadaki MG, Taylor GT, Astor Y, Edgcomb VP. (2017) Free-living chemoautotrophic and particle-attached heterotrophic prokaryotes dominate microbial assemblages along a pelagic marine redox gradient. Environ Microbiol, doi:10.1111/1462-2920.13997.

Thorne, L. H., Foley, H. J., Baird, R. W., Webster, D. L., Swaim, Z. T., & Read, A. J. (2017). Movement and foraging behavior of short-finned pilot whales in the Mid-Atlantic Bight: importance of bathymetric features and implications for management. Marine Ecology Progress Series, 584, 245-257.

Berdalet, E., R. Kudela, E. Urban, H. Enevoldsen, N.S. Banas, E. Bresnan, M. Burford, K. Davidson, C.J. Gobler, B. Karlson, P.T. Lim, L. Mackenzie, M. Montresor, V.L. Trainer, G. Usup, and K. Yin. 2017. GlobalHAB: A new program to promote international research, observations, and modeling of harmful algal blooms in aquatic systems. Oceanography 30(1):70–81, https://doi.org/10.5670/oceanog.2017.111.

Tamborski, J. J., Cochran, J. K., Heilbrun, C., Rafferty, P., Fitzgerald, P., Zhu, Q., & Salazar, C. (2017). Investigation of pore water residence times and drainage velocities in salt marshes using short-lived radium isotopes. Marine Chemistry, 196, 107-115.

Ullrich, P. A., Jablonowski, C., Kent, J., Lauritzen, P. H., Nair, R., Reed, K. A., … & Konor, C. (2017). DCMIP2016: a review of non-hydrostatic dynamical core design and intercomparison of participating models. Geoscientific Model Development, 10(12), 4477.

Baumann, H., & Nye, J. (2017). Fatty acid profiles of M. menidia females and their unfertilized eggs.

Baumann, H., & Nye, J. (2017). Survival, length, and growth responses of M. menidia offspring from different females exposed to contrasting CO2 environments.

Riaz, S. M., Iqbal, M. J., & Hameed, S. (2017). Impact of the North Atlantic Oscillation on winter climate of Germany. Tellus A: Dynamic Meteorology and Oceanography, 69(1), 1406263.

Dasgupta, S., Choyke, S., Ferguson, P. L., & McElroy, A. E. (2018). Antioxidant responses and oxidative stress in sheepshead minnow larvae exposed to Corexit 9500® or its component surfactant, DOSS. Aquatic Toxicology, 194, 10-17.

Taylor, G. T., Suter, E. A., Pachiadaki, M. G., Astor, Y., Edgcomb, V. P., & Scranton, M. I. (2017). Temporal shifts in dominant sulfur-oxidizing chemoautotrophic populations across the Cariaco Basin’s redoxcline. Deep Sea Research Part II: Topical Studies in Oceanography.

Korfe, N. G., & Colle, B. A. (2017). Evaluation of Cool-Season Extratropical Cyclones in a Multi-Model Ensemble for Eastern North America and the Western Atlantic Ocean. Weather and Forecasting, (2017).

Alldred, M., Liberti, A., & Baines, S. B. (2017). Impact of salinity and nutrients on salt marsh stability. Ecosphere, 8(11).

Saraf, S. R., Frenkel, A., Harke, M. J., Jankowiak, J. G., Gobler, C. J., & McElroy, A. E. (2017). Effects of Microcystis on development of early life stage Japanese medaka (Oryzias latipes): Comparative toxicity of natural blooms, cultured Microcystis and microcystin-LR. Aquatic Toxicology.

GOBLER, C. J. (2017). PDD BASED ON THE FINAL ENVIRONMENTAL IMPACT STATEMENT.

Zhou, X., & Khairoutdinov, M. F. (2017). Changes in Temperature and Precipitation Extremes in Superparameterized CAM in Response to Warmer SSTs. Journal of Climate, 30(24), 9827-9845.

Lau, Y. T., Sussman, L., Espinosa, E. P., Katalai, S., & Allam, B. (2017). Characterization of hemocytes from different body fluids of the eastern oyster Crassostrea virginica. Fish & Shellfish Immunology 71: 372-379

Zarnoch, C. B., Hoellein, T. J., Furman, B. T., & Peterson, B. J. (2017). Eelgrass meadows, Zostera marina (L.), facilitate the ecosystem service of nitrogen removal during simulated nutrient pulses in Shinnecock Bay, New York, USA. Marine Pollution Bulletin, 124(1), 376-387.

Gobler, C. J., Hattenrath-Lehmann, T. K., Doherty, O. M., Griffith, A. W., Kang, Y., & Litaker, R. W. (2017). Reply to Dees et al.: Ocean warming promotes species-specific increases in the cellular growth rates of harmful algal blooms. Proceedings of the National Academy of Sciences, 201715749.

Fratantoni, D. M., O’Brien, J. K., Flagg, C., & Rossby, T. (2017). AXIS–an Autonomous eXpendable Instrument System. Journal of Atmospheric and Oceanic Technology, (2017).

Fryer, P., Wheat, G., Williams, T., and the Expedition 366 Scientists, 2017. Expedition 366 Preliminary Report: Mariana Convergent Margin and South Chamorro Seamount. International Ocean Discovery Program. https://doi.org/10.14379/iodp.pr.366.2017

Chavas, D. R., K. A. Reed and J. A. Knaff (2017), Physical understanding of the tropical cyclone wind-pressure relationship, Nature Communications, 8, 1360, doi: 10.1038/s41467-017-01546-9

Küchler, N., Kneifel, S., Löhnert, U., Kollias, P., Czekala, H., & Rose, T. (2017). A W-Band Radar–Radiometer System for Accurate and Continuous Monitoring of Clouds and Precipitation. Journal of Atmospheric and Oceanic Technology, 34(11), 2375-2392.

Zhang, Z., & Colle, B. A. (2017). Changes in Extratropical Cyclone Precipitation and Associated Processes During the 21st Century over Eastern North America and the Western Atlantic Using a Cyclone-Relative Approach. Journal of Climate, (2017).

Zhou, X., Ackerman, A. S., Fridlind, A. M., Wood, R., & Kollias, P. (2017). Impacts of solar-absorbing aerosol layers on the transition of stratocumulus to trade cumulus clouds. Atmospheric Chemistry and Physics, 17(20), 12725-12742.

Xu, H., Miller, T. J., Hameed, S., Alade, L. A., & Nye, J. A. Evaluating the utility of the Gulf Stream Index for predicting recruitment of Southern New England‐Mid Atlantic yellowtail flounder. Fisheries Oceanography. DOI: 10.1111/fog.12236

Zhou, Y., & Kim, H. M. (2017). Prediction of atmospheric rivers over the North Pacific and its connection to ENSO in the North American multi-model ensemble (NMME). Climate Dynamics, 1-15.

Xu, N., Wang, M., Tang, Y., Zhang, Q., Duan, S., & Gobler, C. J. (2017). Acute toxicity of the cosmopolitan bloom-forming dinoflagellate Akashiwo sanguinea to finfish, shellfish, and zooplankton. Aquatic Microbial Ecology, 80(3), 209-222.

Astor, Y.M., Lorenzoni, L., Guzman, L., Fuentes, G., Muller-Karger, F., Varela, R., Scranton, M., Taylor, G.T. and Thunell, R., 2017. Distribution and variability of the dissolved inorganic carbon system in the Cariaco Basin, Venezuela. Marine Chemistry, 195, 15-26.

Price, R.E., Boyd, E., Hoehler, T.M., Wehrmann, L.M., Bogason, E., Valtýsson, H., Örlygsson, J., Gautason, B., Amend, J., 2017. Alkaline vents and steep Na+ gradients from ridge-flank basalts—Implications for the origin and evolution of life. Geology, v. 45 (12).

Tang, T., Filippino, K. C., Liu, Z., Mulholland, M. R., & Lee, C. (2017). Peptide hydrolysis and uptake of peptide hydrolysis products in the James River estuary and lower Chesapeake Bay. Marine Chemistry.

Zhang, Y., Klein, S. A., Fan, J., Chandra, A. S., Kollias, P., Xie, S., & Tang, S. (2017). Large-eddy simulation of shallow cumulus over land: A composite case based on ARM long-term observations at its Southern Great Plains site. Journal of the Atmospheric Sciences, (2017).

Kang, Y., & Gobler, C. J. (2017). The brown tide algae, Aureococcus anophagefferens and Aureoumbra lagunensis (Pelagophyceae), allelopathically inhibit the growth of competing microalgae during harmful algal blooms. Limnology and Oceanography.

Lin, Y., Dong, W., Zhang, M., Xie, Y., Xue, W., Huang, J., & Luo, Y. (2017). Causes of model dry and warm bias over central US and impact on climate projections. Nature Communications, 8.

Thickman, J. D., & Gobler, C. J. (2017). The ability of algal organic matter and surface runoff to promote the abundance of pathogenic and non-pathogenic strains of Vibrio parahaemolyticus in Long Island Sound, USA. PloS one, 12(10), e0185994.

Bowman, M. J., Yaro, R., & Golden, W. B. Regional Storm Surge Planning for Metro New York/New Jersey. In International Conference on Sustainable Infrastructure 2017 (pp. 336-347).

Liu, P., Zhu, Y., Zhang, Q., Gottschalck, J., Zhang, M., Melhauser, C., Li, W., Guan, H., Zhou, X., Hou, D. and Peña, M., (2017). Climatology of tracked persistent maxima of 500-hPa geopotential height. Climate Dynamics, pp.1-17.

Ling, J., Kegelmeyer, W. P., Aditya, K., Kolla, H., Reed, K. A., Shead, T. M., & Davis, W. L. (2017, October). Using feature importance metrics to detect events of interest in scientific computing applications. In 2017 IEEE 7th Symposium on Large Data Analysis and Visualization (LDAV) (pp. 55-63). IEEE.

Leonardo, N. M., & Colle, B. A. (2017). Verification of Multimodel Ensemble Forecasts of North Atlantic Tropical Cyclones. Weather and Forecasting, 32(6), 2083-2101.

Lee, C. S., & Fisher, N. S. (2017). Bioaccumulation of methylmercury in a marine diatom and the influence of dissolved organic matter. Marine Chemistry.

Dasgupta, S., & McElroy, A. E. (2017). Cytotoxicity and CYP1A inhibition in rainbow trout liver (RTL-W1) cell lines exposed to dispersant Corexit 9500 and its major surfactant components. Toxicology in Vitro, 44, 377-381.

Tinoco, A. I., Furman, B. T., Darnell, K. M., & Peterson, B. J. (2017). Submerged aquatic vegetation, topography and flow characteristics in the upper, tidal Hudson River: Progress toward a predictive habitat model. Aquatic Botany, 142, 53-60.

Fan, S., Knopf, D. A., Heymsfield, A. J., & Donner, L. J. (2017). Modeling of aircraft measurements of ice crystal concentration in the Arctic and a parameterization for mixed-phase cloud. Journal of the Atmospheric Sciences, (2017).

Rahman, S., Aller, R. C., & Cochran, J. K. (2017). The missing silica sink: revisiting the marine sedimentary Si cycle using cosmogenic 32Si. Global Biogeochemical Cycles, 31, 1559-1578.

Lynch, H. J., Foley, C. M., Lynch, M. A., & Thorne, L. H. (2017). Response to Van Norman. BioScience, bix109.

Shipley, O.N., Murchie, K.J., Frisk, M.G., Brooks, E.J., Shea, O.R.O., & Power M. (2017). Low lipid and urea effects and inter-tissue comparisons of stable isotope signatures in three nearshore elasmobranchs. Marine Ecology Progress Series, 579, 233-238.

Kim, H. M., & Kim, B. M. (2017). Relative Contributions of Atmospheric Energy Transport and Sea Ice Loss to the Recent Warm Arctic Winter. Journal of Climate, 30(18), 7441-7450.

Griffith, A. W., & Gobler, C. J. (2017). Transgenerational exposure of North Atlantic bivalves to ocean acidification renders offspring more vulnerable to low pH and additional stressors. Scientific Reports, 7.

Tamborski, J. J., Cochran, J. K., & Bokuniewicz, H. J. (2017). Submarine groundwater discharge driven nitrogen fluxes to Long Island Sound, NY: Terrestrial vs. marine sources. Geochimica et Cosmochimica Acta, 218, 40-57.

Fan, J., Han, B., Varble, A., Morrison, H., North, K., Kollias, P., … & Lin, Y. (2017). Cloud‐resolving model intercomparison of an MC3E squall line case: Part I—Convective updrafts. Journal of Geophysical Research: Atmospheres, 122(17), 9351-9378.

Zhou, X., & Khairoutdinov, M. F. (2017). Changes in Temperature and Precipitation Extremes in Super-parameterized CAM in Response to Warmer SSTs. Journal of Climate, (2017).

North, K. W., Oue, M., Kollias, P., Giangrande, S. E., Collis, S. M., & Potvin, C. K. (2017). Vertical air motion retrievals in deep convective clouds using the ARM scanning radar network in Oklahoma during MC3E. Atmospheric Measurement Techniques, 10(8), 2785.

Hu, Z., Wang, D. P., He, X., Li, M., Wei, J., Pan, D., & Bai, Y. (2017). Episodic surface intrusions in the Yellow Sea during relaxation of northerly winds. Journal of Geophysical Research: Oceans.

Thomas, A. C., Pershing, A. J., Friedland, K. D., Nye, J. A., Mills, K. E., Alexander, M. A., … & Henderson, M. E. (2017). Seasonal trends and phenology shifts in sea surface temperature on the North American northeastern continental shelf. Elem Sci Anth, 5.

Waugh, S., & Aller, R. C. (2017). N 2 production and fixation in deep-tier burrows of Squilla empusa in muddy sediments of Great Peconic Bay. Journal of Sea Research.

Tang, S., Zhang, M., & Xie, S. (2017). Investigating the Dependence of SCM Simulated Precipitation and Clouds on the Spatial Scale of Large‐Scale Forcing at SGP. Journal of Geophysical Research: Atmospheres.

Naeger, A. R., Colle, B. A., & Molthan, A. (2017). Evaluation of Cloud Microphysical Schemes for a Warm Frontal Snowband During the GPM Cold Season Precipitation Experiment (GCPEx). Monthly Weather Review, (2017).

Pikitch, E. K., Boersma, P. D., Boyd, I. L., Conover, D. O., Cury, P., Essington, T. E., … & Plaganyi, E. (2017). The strong connection between forage fish and their predators: A response to Hilborn et al.(2017). Fisheries Research.

Young, C. S., & Gobler, C. J. (2017). The organizing effects of elevated CO2 on competition among estuarine primary producers. Scientific Reports, 7.

McCartain, L. D., Townsend, M., Thrush, S. F., Wethey, D. S., Woodin, S. A., Volkenborn, N., & Pilditch, C. A. (2017). The effects of thin mud deposits on the behaviour of a deposit-feeding tellinid bivalve: implications for ecosystem functioning. Marine and Freshwater Behaviour and Physiology, 50(4), 239-255.

Wehrmann, L.M., Riedinger, N., Brunner, B., Kamyshny Jr., A., Hubert, C.R.J., Herbert, L.C., Brüchert, V., Jørgensen, B.B., Ferdelman, T.G., Formolo M.J., 2017. Iron-controlled oxidative sulfur cycling recorded in the distribution and isotopic composition of sulfur species in glacially influenced fjord sediments of west Svalbard. Chemical Geology 466, 678-695.

Mao, X., Waugh, S., Langlois, K., Collier, J.L., Price, R., Garvey, J., Gobler, C. and Walker, H., 2017. Nitrogen transformations and microbial characterization in passive nitrogen removing biofilters (NRBs) for onsite wastewater treatment. Proceedings of the Water Environment Federation, 2017(15), pp.898-906.

Bond, M. E., Valentin-Albanese, J., Babcock, E. A., Abercrombie, D., Lamb, N. F., Miranda, A., Pikitch, E.K. & Chapman, D. D. (2017). Abundance and size structure of a reef shark population within a marine reserve has remained stable for more than a decade. Marine Ecology Progress Series, 576, 1-10.

Narenpitak, P., Bretherton, C. S., & Khairoutdinov, M. F. (2017). Cloud and circulation feedbacks in a near‐global aquaplanet cloud‐resolving model. Journal of Advances in Modeling Earth Systems.

Sollich, M; Yoshinaga, M.Y.; Häusler, S; Price, R.E.; Hinrichs, K-U; Bühring, S.I. (2017). Heat stress dictates microbial lipid composition along a thermal gradient in marine sediments. Frontiers in Microbiology.

J. Yu, R. E. Wilson and C. N. Flagg 2017 A Hydraulic Model for Multiple-Bay-Inlet Systems onBarrier Islands. Estuaries and Coasts DOI 10.1007/s12237-017-0294-2

Taylor GT, Suter EA, Li ZQ, Chow S, Stinton D, Zaliznyak T and Beaupré SR (2017) Single-Cell Growth Rates in Photoautotrophic Populations Measured by Stable Isotope Probing and Resonance Raman Microspectrometry. Front. Microbiol. 8:1449. doi: 10.3389/fmicb.2017.01449

Li, Y., & Zhang, M. (2017). The Role of Shallow Convection over the Tibetan Plateau. Journal of Climate, 30(15), 5791-5803.

Hattenrath-Lehmann, T. K., & Gobler, C. J. (2017). Identification of unique microbiomes associated with harmful algal blooms caused by Alexandrium fundyense and Dinophysis acuminata. Harmful Algae, 68, 17-30.

Bond, M. E., Valentin-Albanese, J., Babcock, E. A., Abercrombie, D., Lamb, N. F., Miranda, A., Pikitch, E.K. & Chapman, D. D. (2017). Abundance and size structure of a reef shark population within a marine reserve has remained stable for more than a decade. Marine Ecology Progress Series, 576, 1-10.

Kim, H. M. (2017). The impact of the mean moisture bias on the key physics of MJO propagation in the ECMWF reforecast. Journal of Geophysical Research: Atmospheres, 122(15), 7772-7784.

Zhang, Z., & Colle, B. A. (2017). Changes in Extratropical Cyclone Precipitation and Associated Processes During the 21st Century over Eastern North America and the Western Atlantic Using a Cyclone-Relative Approach. Journal of Climate, (2017).

Collier, J. L., Geraci-Yee, S., Lilje, O., & Gleason, F. H. (2017). Possible impacts of zoosporic parasites in diseases of commercially important marine mollusc species: part II. Labyrinthulomycota. Botanica Marina, 60(4), 409-417.

Gleason, F. H., Lilje, O., Dang, C., Geraci-Yee, S., & Collier, J. L. (2017). Possible impacts of zoosporic parasites in diseases of commercially important marine mollusc species: part I. Perkinsozoa. Botanica Marina, 60(4), 401-408.

Dheilly NM, Bolnick D, Bordenstein S, Brindley PJ, Figueres C, Holmes EC, Martinez Martinez J, Phillips AJ, Poulin R, Rosario K (2017). Parasite Microbiome Project: Systematic investigation of microbiome dynamics within and across parasite-host interactions mSystems 2(4)

McDowall, P., & Lynch, H. J. (2017). The importance of topographically corrected null models for analyzing ecological point processes. Ecology.

Madigan, D. J., Baumann, Z., Snodgrass, O. E., Dewar, H., Berman-Kowalewski, M., Weng, K. C., … & Fisher, N. S. (2017). Assessing Fukushima-derived radiocesium in migratory Pacific predators. Environmental Science & Technology, 51(16), 8962-8971.

Scott, R. C., Lubin, D., Vogelmann, A. M., & Kato, S. (2017). West Antarctic Ice Sheet cloud cover and surface radiation budget from NASA A-train satellites. Journal of Climate, 30(16), 6151-6170.

Rountos, K. J., Gobler, C. J., & Pikitch, E. K. (2017). Ontogenetic Differences in Swimming Behavior of Fish Exposed to the Harmful Dinoflagellate Cochlodinium polykrikoides. Transactions of the American Fisheries Society, 146(5), 1081-1091.

Zhou, X., Heus, T., & Kollias, P. (2017). Influences of Drizzle on Stratocumulus Cloudiness and Organization. Journal of Geophysical Research: Atmospheres.

Monastero, R. N., Karimi, R., Nyland, J. F., Harrington, J., Levine, K., & Meliker, J. R. (2017). Mercury exposure, serum antinuclear antibodies, and serum cytokine levels in the Long Island Study of Seafood Consumption: A cross-sectional study in NY, USA. Environmental Research, 156, 334-340.

Parishani, H., Pritchard, M. S., Bretherton, C. S., Wyant, M. C., & Khairoutdinov, M. (2017). Toward low cloud‐permitting cloud superparameterization with explicit boundary layer turbulence. Journal of Advances in Modeling Earth Systems.

Henderson, M. E., Mills, K. E., Thomas, A. C., Pershing, A. J., & Nye, J. A. Effects of spring onset and summer duration on fish species distribution and biomass along the Northeast United States continental shelf. Reviews in Fish Biology and Fisheries, 1-14.

Kang, Y., Kudela, R. M., & Gobler, C. J. Quantifying nitrogen assimilation rates of individual phytoplankton species and plankton groups during harmful algal blooms via sorting flow cytometry. Limnology and Oceanography: Methods.

Tridon, F., Battaglia, A., Luke, E., & Kollias, P. (2017). Rain retrieval from dual‐frequency radar Doppler spectra: validation and potential for a midlatitude precipitating case‐study. Quarterly Journal of the Royal Meteorological Society, 143(704), 1364-1380.

Taylor, D. (2017) Palm Up, Palm Down. San Antonio, TX: Wings Press.

Taylor, D. (2017) Palm Up, Palm Down. San Antonio, TX: Wings Press.

Nicolas, J. P., Vogelmann, A. M., Scott, R. C., Wilson, A. B., Cadeddu, M. P., Bromwich, D. H., … & Powers, H. H. (2017). January 2016 extensive summer melt in West Antarctica favoured by strong El Niño. Nature communications, 8, ncomms15799.

Melnychuk, M. C., Dunton, K. J., Jordaan, A., McKown, K. A., & Frisk, M. G. (2017). Informing conservation strategies for the endangered Atlantic sturgeon using acoustic telemetry and multi‐state mark–recapture models. Journal of Applied Ecology, 54(3), 914-925.

Miller, C., Karimi, R., Zhang, Q., Yang, J., & Meliker, J. (2017). Mercury, eicosapentanoic acid and docosahexaenoic acid demonstrate limited effect on plasma paraoxonase-1 activity and blood pressure among avid seafood consumers in the Long Island Study of Seafood Consumption, NY, USA. International journal of hygiene and environmental health, 220(2), 373-377.

Isaacman-VanWertz, G., Massoli, P., O’Brien, R.E., Nowak, J.B., Canagaratna, M.R., Jayne, J.T., Worsnop, D.R., Su, L., Knopf, D.A., Misztal, P.K. and Arata, C., (2017). Using advanced mass spectrometry techniques to fully characterize atmospheric organic carbon: current capabilities and remaining gaps. Faraday Discussions.

Acquistapace, C., Kneifel, S., Löhnert, U., Kollias, P., Maahn, M., & Bauer-Pfundstein, M. (2017). Optimizing observations of drizzle onset with millimeter-wavelength radars. Atmospheric Measurement Techniques, 10(5), 1783-1802.

Chen, J., Pycke, B. F., Brownawell, B. J., Kinney, C. A., Furlong, E. T., Kolpin, D. W., & Halden, R. U. (2017). Occurrence, temporal variation, and estrogenic burden of five parabens in sewage sludge collected across the United States. Science of The Total Environment, 593, 368-374.

Rosen, B. H., Davis, T. W., Gobler, C. J., Kramer, B. J., & Loftin, K. A. (2017). Cyanobacteria of the 2016 Lake Okeechobee and Okeechobee Waterway harmful algal bloom (No. 2017-1054). US Geological Survey.

Price, R.E., and Giovannelli, D. 2017. A Review of the Geochemistry and Microbiology of Marine Shallow-Water Hydrothermal Vents, Reference Module in Earth Systems and Environmental Sciences, Elsevier, 2017. 30-May-17. doi: 10.1016/B978-0-12-409548-9.09523-3.

Yang, K., Davidson, R. A., Nozick, L. K., Blanton, B., & Colle, B. (2017). Scenario-Based Hazard Trees for Depicting Resolution of Hurricane Uncertainty over Time. Natural Hazards Review, 18(3), 04017001.

Brzezinski, M. A., Krause, J. W., Baines, S. B., Collier, J. L., & Ohnemus, D. C. (2017). Patterns and regulation of silicon accumulation in Synechococcus spp. Journal of Phycology.

Farhadzadeh, A. (2017). A study of Lake Erie seiche and low frequency water level fluctuations in the presence of surface ice. Ocean Engineering, 135, 117-136.

Rider, T. (2017). Review of Between Stony Brook Harbor Tides: The Natural History of a Long Island Pocket Bay by R. Lawrence Swanson and Malcolm J. Bowman. Long Island History Journal, Vol 26-1

Swanson, R. L., Wilson, R., Brownawell, B., & Willig, K. (2017). Environmental consequences of the flooding of the Bay Park Sewage Treatment Plant during Superstorm Sandy. Marine Pollution Bulletin.

Lee, C. S., & Fisher, N. S. (2017). Bioaccumulation of methylmercury in a marine copepod. Environmental toxicology and chemistry, 36(5), 1287-1293.

Mahmoudi, N., Beaupré, S. R., Steen, A. D., & Pearson, A. (2017). Sequential bioavailability of sedimentary organic matter to heterotrophic bacteria. Environmental Microbiology.

Narenpitak, P., Bretherton, C. S., & Khairoutdinov, M. F. (2017). Cloud and circulation feedbacks in a near‐global aquaplanet cloud‐resolving model. Journal of Advances in Modeling Earth Systems.

Krause, J. W., Brzezinski, M. A., Baines, S. B., Collier, J. L., Twining, B. S., & Ohnemus, D. C. (2017). Picoplankton contribution to biogenic silica stocks and production rates in the Sargasso Sea. Global Biogeochemical Cycles.

Jackson, L. J., Furman, B. T., & Peterson, B. J. (2017). Morphological response of Zostera marina reproductive shoots to fertilized porewater. Journal of Experimental Marine Biology and Ecology, 489, 1-6.

Aller, J. Y., Radway, J. C., Kilthau, W. P., Bothe, D. W., Wilson, T. W., Vaillancourt, R. D., … & Knopf, D. A. (2017). Size-resolved characterization of the polysaccharidic and proteinaceous components of sea spray aerosol. Atmospheric Environment, 154, 331-347.

Gobler, C. J., Doherty, O. M., Hattenrath-Lehmann, T. K., Griffith, A. W., Kang, Y., & Litaker, R. W. (2017). Ocean warming since 1982 has expanded the niche of toxic algal blooms in the North Atlantic and North Pacific oceans. Proceedings of the National Academy of Sciences, 201619575. doi:10.1073/pnas.1619575114

Farhadzadeh, A., Hashemi, M. R., & Neill, S. (2017). Characterizing the Great Lakes Hydrokinetic Renewable Energy Resource: Lake Erie Wave, Surge and Seiche Characteristics. Energy.

Suter, E. A., Scranton, M. I., Chow, S., Stinton, D., Medina Faull, L., & Taylor, G. T. (2017). Niskin bottle sample collection aliases microbial community composition and biogeochemical interpretation. Limnology and Oceanography, 62(2), 606-617.

Humphries, G. R. W., Naveen, R., Schwaller, M., Che-Castaldo, C., McDowall, P., Schrimpf, M., & Lynch, H. J. (2017). Mapping Application for Penguin Populations and Projected Dynamics (MAPPPD): data and tools for dynamic management and decision support. Polar Record, 1-7.

Zheng, M., Chang, E.K., Colle, B.A., Luo, Y. and Zhu, Y., 2017. Applying Fuzzy Clustering to a Multimodel Ensemble for US East Coast Winter Storms: Scenario Identification and Forecast Verification. Weather and Forecasting, 32(3), pp.881-903.

Riedinger N, Brunner B, Krastel S, Arnold GL, Wehrmann LM, Formolo MJ, Beck A, Bates SM, Henkel S, Kasten S and Lyons TW (2017) Sulfur cycling in an iron oxide-dominated, dynamic marine depositional system: The Argentine continental margin. Frontiers in Earth Sciences 5:33. doi:10.3389/feart.2017.00033

Farhadzadeh, A., & Gangai, J. (2017). Numerical Modeling of Coastal Storms for Ice-Free and Ice-Covered Lake Erie. Journal of Coastal Research.

Schmidt, S. K., Darcy, J. L., Sommers, P., Gunawan, E., Knelman, J. E., & Yager, K. (2017). Freeze–thaw revival of rotifers and algae in a desiccated, high-elevation (5500 meters) microbial mat, high Andes, Perú. Extremophiles, 1-8.

Roberts, K. J., Colle, B. A., & Korfe, N. (2017). Impact of Simulated Twenty-First-Century Changes in Extratropical Cyclones on Coastal Flooding at the Battery, New York City. Journal of Applied Meteorology and Climatology, 56(2), 415-432.

Painemal, D., Chiu, J. Y. C., Minnis, P., Yost, C., Zhou, X., Cadeddu, M., … & Kollias, P. (2017). Aerosol and cloud microphysics covariability in the northeast Pacific boundary layer estimated with ship‐based and satellite remote sensing observations. Journal of Geophysical Research: Atmospheres, 122(4), 2403-2418.

Cernadas-Martín S, Suter EA, Scranton MI, Astor Y, Taylor GT (2017) Aerobic and anaerobic ammonium oxidizers in the Cariaco Basin: distributions of major taxa and nitrogen species across the redoxcline. Aquat Microb Ecol 79:31-48. https://doi.org/10.3354/ame01817

Foley, C. M., Lynch, M. A., Thorne, L. H., & Lynch, H. J. (2017). Listing Foreign Species under the Endangered Species Act: A Primer for Conservation Biologists. BioScience, bix027.

Chen, J., Pycke, B. F., Brownawell, B. J., Kinney, C. A., Furlong, E. T., Kolpin, D. W., & Halden, R. U. (2017). Occurrence, temporal variation, and estrogenic burden of five parabens in sewage sludge collected across the United States. Science of The Total Environment, 593, 368-374.

Wolfe, C. L., Cessi, P., & Cornuelle, B. D. (2017). An Intrinsic Mode of Interannual Variability in the Indian Ocean. Journal of Physical Oceanography, 47(3), 701-719.

Kim, H. M., Zhou, Y., & Alexander, M. A. (2017). Changes in atmospheric rivers and moisture transport over the Northeast Pacific and western North America in response to ENSO diversity. Climate Dynamics, 1-14.

Xie, J., & Zhang, M. (2017). Role of internal atmospheric variability in the 2015 extreme winter climate over the North American continent. Geophysical Research Letters.

Liu, Q., Collier, J. L., & Allam, B. (2017). Seasonality of QPX disease in the Raritan Bay (NY) wild hard clam (Mercenaria mercenaria) population. Aquaculture Research, 48(3), 1269-1278.

Ma, C. G., & Chang, E. K. (2017). Impacts of storm track variations on winter time extreme weather events over the continental US. Journal of Climate, (2017).

China, S., Alpert, P. A., Zhang, B., Schum, S., Dzepina, K., Wright, K., … & Knopf, D. A. (2017). Ice cloud formation potential by free tropospheric particles from long‐range transport over the Northern Atlantic Ocean. Journal of Geophysical Research: Atmospheres.

Guo, Y., Shinoda, T., Lin, J., & Chang, E. K. (2017). Variations of Northern Hemisphere Storm Track and Extratropical Cyclone Activity Associated with the Madden-Julian Oscillation. Journal of Climate, (2017).

Wang, W. L., Lee, C., Cochran, J. K., Primeau, F. W., & Armstrong, R. A. (2017). A novel statistical analysis of chloropigment fluxes to constrain particle exchange and organic matter remineralization rate constants in the Mediterranean Sea. Marine Chemistry, 192, 49-58.

Dvarskas, A. (2017). Dynamically linking economic models to ecological condition for coastal zone management: Application to sustainable tourism planning. Journal of Environmental Management, 188, 163-172.

Yin, H., Zhu, Q., & Aller, R. C. (2017). An irreversible planar optical sensor for multi-dimensional measurements of sedimentary H 2 S. Marine Chemistry.

Herrington, A. R. and K. A. Reed (2017) An explanation for the sensitivity of the Community Atmosphere Model to horizontal resolution on aqua-planets. Journal of Climate. doi: 10.1175/JCLI-D-16-0069.1

Karatayev, A. Y., Burlakova, L. E., & Padilla, D. K. Can introduced species replace lost biodiversity? A test with freshwater molluscs. Hydrobiologia, 1-12.

Hattenrath-Lehmann, T. K., Ossiboff, R. J., Burnell, C. A., Rauschenberg, C. D., Hynes, K., Burke, R. L., … & Gobler, C. J. (2017). The role of a PSP-producing Alexandrium bloom in an unprecedented diamondback terrapin (Malaclemys terrapin) mortality event in Flanders Bay, New York, USA. Toxicon, 129, 36-43.

Tamborski, J. J., Cochran, J. K., & Bokuniewicz, H. J. (2017). Application of 224 Ra and 222 Rn for evaluating seawater residence times in a tidal subterranean estuary. Marine Chemistry. 189: 32–45.

Wehner, M. F., Reed, K. A., & Zarzycki, C. M. (2017). High-Resolution Multi-decadal Simulation of Tropical Cyclones. In Hurricanes and Climate Change (pp. 187-211). Springer International Publishing.

Kasina, M., Bock, S., Würdemann, H., Pudlo, D., Picard, A., Lichtschlag, A., März, C., Wagenknecht, L., Wehrmann, L.M., Vogt, C., Meister, P. (2017) Mineralogical and geochemical analysis of Fe-phases in drill-cores from the Triassic Stuttgart Formation at Ketzin CO2 storage site before CO2 arrival. Environ Earth Sci 76: 161. doi:10.1007/s12665-017-6460-9

McCoy, E., Borrett, S. R., LaPeyre, M. K., & Peterson, B. J. (2017). Estimating the impact of oyster restoration scenarios on transient fish production. Restoration Ecology.

Charnawskas, J. C., Alpert, P. A., Lambe, A., Berkemeier, T., O’Brien, R. E., Massoli, P., … Knopf, D.A. & Davidovits, P. (2017). Condensed-phase biogenic-anthropogenic interactions with implications for cold cloud formation. Faraday Discussions.

Martinez, C. M., Duplisea, D. E., Cerrato, R. M., & Frisk, M. G. (2017). Exploration of Trends in Interspecific Abundance-Occupancy Relationships Using Empirically Derived Simulated Communities. PloS one, 12(1), e0170816.

Colle, B. A., Naeger, A. R., & Molthan, A. (2017). Evolution of an Intense Warm Frontal Precipitation Band During the GPM Cold-Season Precipitation Experiment (GCPEx)

Slade, J. H., Shiraiwa, M., Arangio, A., Su, H., Pöschl, U., Wang, J., & Knopf, D. A. (2017). Cloud droplet activation through oxidation of organic aerosol influenced by temperature and particle phase state. Geophysical Research Letters.

Wang, J., Kim, H. M., & Chang, E. K. (2017). Changes in Northern Hemisphere Winter Storm Tracks under the Background of Arctic Amplification. Journal of Climate, (2017).

Rubin, E., Tanguy, A., Pales Espinosa, E., & Allam, B. (2017). Differential Gene Expression in Five Isolates of the Clam Pathogen, Quahog Parasite Unknown (QPX). Journal of Eukaryotic Microbiology.

Seimon TA, Seimon A, Yager K, Reider K, Delgado A, Sowell P, Tupayachi A, Konecky B, McAloose D, Halloy S. Long-term monitoring of tropical alpine habitat change, Andean anurans, and chytrid fungus in the Cordillera Vilcanota, Peru: Results from a decade of study. Ecology and Evolution;00:1–14

Scoccimarro, E., Fogli, P. G., Reed, K. A., Gualdi, S., Masina, S., & Navarra, A. (2017). Tropical Cyclone Interaction with the Ocean: The Role of High-Frequency (Subdaily) Coupled Processes. Journal of Climate, 30(1), 145-162.

Barrett, B. S., & Hameed, S. (2017). Seasonal Variability in Precipitation in Central and Southern Chile: Modulation by the South Pacific High. Journal of Climate, 30(1), 55-69.

Kim, O. Y., Kim, H. M., Lee, M. I., & Min, Y. M. (2017). Dynamical–statistical seasonal prediction for western North Pacific typhoons based on APCC multi-models. Climate Dynamics, 48(1-2), 71-88.

Pochron, S., Fiorenza, A., Sperl, C., Ledda, B., Patterson, C., Tucker, C., … & Panico, N. (2017). The response of earthworms (Eisenia fetida) and soil microbes to the crumb rubber material used in artificial turf fields. Chemosphere.

Ghate, V. P., & Kollias, P. (2016). On the controls of daytime precipitation in the Amazonian dry season. Journal of Hydrometeorology, 17(12), 3079-3097.

Rodellas, V., Garcia-Orellana, J., Trezzi, G., Masqué, P., Stieglitz, T.C., Bokuniewicz, H., Cochran, J.K. and Berdalet, E., (2017). Using the radium quartet to quantify submarine groundwater discharge and porewater exchange. Geochimica et Cosmochimica Acta, 196, pp.58-73.

Cao, L., Chen, Y., Dong, S., Hanson, A., Huang, B., Leadbitter, D., Little, D.C., Pikitch, E.K., Qiu, Y., de Mitcheson, Y.S. and Sumaila, U.R., 2017. Opportunity for marine fisheries reform in China. Proceedings of the National Academy of Sciences, 114(3), pp.435-442.

Feng, H., Qian, Y., Cochran, J.K., Zhu, Q., Hu, W., Yan, H., Li, L., Huang, X., Chu, Y.S., Liu, H., Yoo, S., & Liu, C.J., (2017) Nanoscale measurement of trace element distributions in Spartina alterniflora root tissue during dormancy, Scientific Reports, 7:40420.

Furman, B. T., Jackson, L. J., & Peterson, B. J. (2017). Edaphic resource foraging by Zostera marina (Linnaeus) patches. Journal of Experimental Marine Biology and Ecology, 486, 214-221.

Chang, E. K. (2017). Projected Significant Increase in the Number of Extreme Extratropical Cyclones in the Southern Hemisphere. Journal of Climate, (2017).

Morse, R. E., Friedland, K. D., Tommasi, D., Stock, C., & Nye, J. (2017). Distinct zooplankton regime shift patterns across ecoregions of the US Northeast continental shelf Large Marine Ecosystem. Journal of Marine Systems, 165, 77-91.

Jin, J., Zeng, Q., Wu, L., Liu, H., & Zhang, M. (2017). Formulation of a new ocean salinity boundary condition and impact on the simulated climate of an oceanic general circulation model. Science China Earth Sciences, 60(3), 491-500.

Flood, R. D., Violante, R. A., Gorgas, T., Schwarz, E., Grützner, J., Uenzelmann-Neben, G., … & St-Onge, G. (2017). IODP workshop: developing scientific drilling proposals for the Argentina Passive Volcanic Continental Margin (APVCM)–basin evolution, deep biosphere, hydrates, sediment dynamics and ocean evolution. Scientific Drilling, 22, 49.

Weinstein, A., Navarrete, L., Ruppel, C., Weber, T.C., Leonte, M., Kellermann, M.Y., Arrington, E.C., Valentine, D.L., Scranton, M.I. and Kessler, J.D., 2016. Determining the flux of methane into Hudson Canyon at the edge of methane clathrate hydrate stability. Geochemistry, Geophysics, Geosystems, 17(10), pp.3882-3892.

Wu, C., Lin, Z., He, J., Zhang, M., Liu, X., Zhang, R., & Brown, H. (2016). A process‐oriented evaluation of dust emission parameterizations in CESM: Simulation of a typical severe dust storm in East Asia. Journal of Advances in Modeling Earth Systems, 8(3), 1432-1452.

Geller, M. A., Zhou, T., Shindell, D., Ruedy, R., Aleinov, I., Nazarenko, L., … & Field, R. D. (2016). Modeling the QBO–Improvements Resulting from Higher Model Vertical Resolution. Journal of Advances in Modeling Earth Systems.

Tang, T., & Lee, C. (2016). The role of surface layer proteins in the degradation of a photosynthetic prokaryote, the cyanobacterium Synechococcus sp. Marine Chemistry, 186, 33-45.

Harke, M. J., Jankowiak, J. G., Morrell, B. K., & Gobler, C. J. (2016). Transcriptomic responses in the bloom-forming cyanobacterium Microcystis induced during exposure to zooplankton. Applied and Environmental Microbiology, AEM-02832.

Gobler, C. J., Clark, H. R., Griffith, A. W., & Lusty, M. W. (2016). Diurnal Fluctuations in Acidification and Hypoxia Reduce the Growth and Survival of Larval and Juvenile Bay Scallops (Argopecten irradians) and Hard Clams (Mercenaria mercenaria). Frontiers in Marine Science, 3, 282.

Moffet, R.C., O’Brien, R.E., Alpert, P.A., Kelly, S.T., Pham, D.Q., Gilles, M.K., Knopf, D.A. and Laskin, A., 2016. Morphology and mixing of black carbon particles collected in central California during the CARES field study. Atmospheric Chemistry and Physics, 16(22), pp.14515-14525.

Duplisea, D. E., Frisk, M. G., & Trenkel, V. M. (2016). Extinction Debt and Colonizer Credit on a Habitat Perturbed Fishing Bank. PloS one, 11(11), e0166409.

Li, L., Liu, H., Wang, L., Yue, S., Tong, X., Zaliznyak, T., Taylor, G.T. and Wong, S.S., 2016. Chemical Strategies for Enhancing Activity and Charge Transfer in Ultrathin Pt Nanowires Immobilized onto Nanotube Supports for the Oxygen Reduction Reaction. ACS applied materials & interfaces, 8(50), pp.34280-34294.

Acharya, B., Alexandre, J., Baines, S., Benes, P., Bergmann, B., Bernabéu, J., … & de Montigny, M. (2016). Search for magnetic monopoles with the MoEDAL forward trapping detector in 13 TeV proton-proton collisions at the LHC. arXiv preprint arXiv:1611.06817.

Gownaris, N. J., Pikitch, E. K., Aller, J. Y., Kaufman, L. S., Kolding, J., Lwiza, K. M., … & Rountos, K. J. (2016). Fisheries and water level fluctuations in the world’s largest desert lake. Ecohydrology.

Oue, M., P. Kollias, K. W. North, A. Tatarevic, S. Endo, A. M. Vogelmann, and W. I. Gustafson (2016): Estimation of cloud fraction profile in shallow convection using a scanning cloud radar. Geophysical Research Letters, 43,10998–11006, doi: 10.1002/2016GL070776.

Yu, J. (2016). A terrain-following model of wave boundary layers. Ocean Modelling, 108, 20-29.

Zeng, Y., Walker, H., & Zhu, Q. (2016). Reduction of nitrate by NaY zeolite supported Fe, Cu/Fe and Mn/Fe nanoparticles. Journal of Hazardous Materials.

Swanson, R. L., & Bowman, M. J. (2016). Between Stony Brook Harbor Tides: The Natural History of a Long Island Pocket Bay. SUNY Press.

Swanson, R. L., & Bowman, M. J. (2016). Between Stony Brook Harbor Tides: The Natural History of a Long Island Pocket Bay. SUNY Press.

Lu, Q., Ruan, Z., Wang, D. P., Chen, D., & Wu, Q. (2016). Zonal transport from the western boundary and its role in warm water volume changes during ENSO. Journal of Physical Oceanography, (2016).

Tang, S., Xie, S., Zhang, Y., Zhang, M., Schumacher, C., Upton, H., … & Feng, Z. (2016). Large-scale vertical velocity, diabatic heating and drying profiles associated with seasonal and diurnal variations of convective systems observed in the GoAmazon2014/5 experiment. Atmospheric Chemistry and Physics, 16(22), 14249-14264.

Lynch, M. A., Foley, C. M., Thorne, L. H., & Lynch, H. J. (2016). Improving the use of biological data in Antarctic management. Antarctic Science, 28(6), 425-431.

Pendergrass, A. G., Reed, K. A., & Medeiros, B. (2016). The link between extreme precipitation and convective organization in a warming climate: Global radiative‐convective equilibrium simulations. Geophysical Research Letters, 43(21).

Ohnemus, D.C., Rauschenberg, S., Krause, J.W., Brzezinski, M.A., Collier, J.L., Geraci-Yee, S., Baines, S.B. and Twining, B.S., 2016. Silicon content of individual cells of Synechococcus from the North Atlantic Ocean. Marine Chemistry, 187, pp.16-24.

Kulp, R. E., & Peterson, B. J. (2016). Evaluating the Impact of Mesopredators on Oyster Restoration in the New York Metropolitan Region. Journal of Shellfish Research, 35(4), 801-807.

Molthan, A. L., Colle, B. A., Yuter, S. E., & Stark, D. (2016). Comparisons of Modeled and Observed Reflectivities and Fall Speeds for Snowfall of Varied Riming Degrees during Winter Storms on Long Island, New York. Monthly Weather Review, 144(11), 4327-4347.

Fields, A. T., Feldheim, K. A., Gelsleichter, J., Pfoertner, C., & Chapman, D. D. (2016). Population structure and cryptic speciation in bonnethead sharks Sphyrna tiburo in the south‐eastern USA and Caribbean. Journal of Fish Biology, 89(5), 2219-2233.

Clark, H. R., & Gobler, C. J. (2016). Diurnal fluctuations in CO2 and dissolved oxygen concentrations do not provide a refuge from hypoxia and acidification for early-life-stage bivalves. Marine Ecology Progress Series, 558, 1-14.

Baumann, H., and J. Nye (2016). Laboratory study of long-term growth in juvenile Menidia menidia (Atlantic silverside) at contrasting CO2 levels for 16 to 122 days in 2015. Biological and Chemical Oceanography Data Management Office (BCO-DMO). http://www.bco-dmo.org/dataset/651461/data

Price, R. E., Breuer, C., Reeves, E., Bach, W., & Pichler, T. (2016). Arsenic bioaccumulation and biotransformation in deep-sea hydrothermal vent organisms from the PACMANUS hydrothermal field, Manus Basin, PNG. Deep Sea Research Part I: Oceanographic Research Papers, 117, 95-106.

Levinton, J. S. (2016). Bilateral linkage of monomorphic and dimorphic limb sizes in fiddler crabs. Biological Journal of the Linnean Society.

Walker, B. D., Primeau, F. W., Beaupré, S. R., Guilderson, T. P., Druffel, E. R. M., & McCarthy, M. D. (2016). Linked changes in marine dissolved organic carbon molecular size and radiocarbon age. Geophysical Research Letters, 43(19).

Babcock Jr, R. W., Wellbrock, A., Slenders, P., & Radway, J. C. (2015). Improving mass transfer in an inclined tubular photobioreactor. Journal of Applied Phycology, 1-9.

Jordi, A., Wang, D. P., & Hamilton, P. (2016). Near-inertial motions in the DeSoto Canyon during Hurricane Georges. Ocean Modelling, 105, 34-43.

D’Elia, M., Warren, J. D., Rodriguez-Pinto, I., Sutton, T. T., Cook, A., & Boswell, K. M. (2016). Diel variation in the vertical distribution of deep-water scattering layers in the Gulf of Mexico. Deep Sea Research Part I: Oceanographic Research Papers.

Beaupré, S. R., Mahmoudi, N., & Pearson, A. (2016). IsoCaRB: A novel bioreactor system to characterize the lability and natural carbon isotopic (14C, 13C) signatures of microbially respired organic matter. Limnology and Oceanography: Methods, 14(10), 668-681.

Dahl, S. F. and Allam, B. (2015), Hard clam relocation as a potential strategy for QPX disease mitigation within an enzootic estuary. Aquaculture Research. doi: 10.1111/are.12793

Rubin, E., Werneburg, G. T., Espinosa, E. P., Thanassi, D. G., & Allam, B. (2016). Identification and characterization of peptidases secreted by quahog parasite unknown (QPX), the protistan parasite of hard clams. Diseases of aquatic organisms, 122(1), 21-33.

Kang, Y., Tang, Y. Z., Taylor, G. T., & Gobler, C. J. (2016). Discovery of a resting stage in the harmful, brown tide‐causing pelagophyte, Aureoumbra lagunensis: a mechanism potentially facilitating recurrent blooms and geographic expansion. Journal of Phycology.

Lee, C. S., Lutcavage, M. E., Chandler, E., Madigan, D. J., Cerrato, R. M., & Fisher, N. S. (2016). Declining Mercury Concentrations in Bluefin Tuna Reflect Reduced Emissions to the North Atlantic Ocean. Environmental Science & Technology.

Yi, W., Nozick, L., Davidson, R., Blanton, B., & Colle, B. (2017). Optimization of the issuance of evacuation orders under evolving hurricane conditions. Transportation Research Part B: Methodological, 95, 285-304.

Urmy, S. S., & Warren, J. D. (2016). Quantitative ornithology with a commercial marine radar: standard‐target calibration, target detection and tracking, and measurement of echoes from individuals and flocks. Methods in Ecology and Evolution.

Fang, M., Albrecht, B., Jung, E., Kollias, P., Jonsson, H., & PopStefanija, I. (2016). Retrieval of Vertical Air Motion in Precipitating Clouds Using Mie Scattering and Comparison with in-situ Measurements. Journal of Applied Meteorology and Climatology, (2016).

Owen, K., Kavanagh, A. S., Warren, J. D., Noad, M. J., Donnelly, D., Goldizen, A. W., & Dunlop, R. A. (2016). Potential energy gain by whales outside of the Antarctic: prey preferences and consumption rates of migrating humpback whales (Megaptera novaeangliae). Polar Biology, 1-13.

Colle, B. A., Naeger, A. R., & Molthan, A. (2016). Structure and Evolution of a Warm Frontal Precipitation Band During the GPM Cold Season Precipitation Experiment (GCPEx). Monthly Weather Review, (2016).

Sanderson, E. W., Orton, P., Fischbach, J. R., Knopman, D., Roberts, H., Solecki, W. D., & Wilson, R. (2016). Computational Modeling of the Jamaica Bay System. In Prospects for Resilience (pp. 167-191). Island Press/Center for Resource Economics.

Walker, B. D., Beaupré, S. R., Guilderson, T. P., McCarthy, M. D., & Druffel, E. R. M. (2016). Pacific carbon cycling constrained by organic matter size, age and composition relationships. Nature Geoscience.

Wang, B., Knopf, D. A., China, S., Arey, B., Harder, T. H., Gilles, M. K., & Laskin, A. (2016). Direct observation of ice nucleation events on individual atmospheric particles, Phys. Chem. Chem. Phys.,, 18, 29721-29731

Baumann, Z., Mason, R.P., Conover, D.O., Balcom, P., Chen, C.Y., Buckman, K.L., Fisher, N.S. and Baumann, H., 2016. Mercury bioaccumulation increases with latitude in a coastal marine fish (Atlantic silverside, Menidia menidia). Canadian Journal of Fisheries and Aquatic Sciences, (999), pp.1-7.

Wang, C., Baumann, Z., Madigan, D. J., & Fisher, N. S. (2016). Contaminated Marine Sediments As a Source of Cesium Radioisotopes for Benthic Fauna near Fukushima. Environmental Science & Technology, 50(19), 10448-10455.

Renfro, A. A., Cochran, J. K., Hirschberg, D. J., Bokuniewicz, H. J., & Goodbred, S. L. (2016). The sediment budget of an urban coastal lagoon (Jamaica Bay, NY) determined using 234 Th and 210 Pb. Estuarine, Coastal and Shelf Science, 180, 136-149.

Lynch, H. J., White, R., Naveen, R., Black, A., Meixler, M. S., & Fagan, W. F. (2016). In stark contrast to widespread declines along the Scotia Arc, a survey of the South Sandwich Islands finds a robust seabird community. Polar Biology, 1-11.

Finn, D., Chandrasekhar, D. and Xiao, Y. (2016) “Planning for resilience in the New York metro region after Superstorm Sandy” in edited collection Spatial planning and resilience following disasters: International and comparative perspectives, Greiving, Ubaura & Tesliar eds. Bristol: Policy Press. 117-135.

Morse, R. E., Friedland, K. D., Tommasi, D., Stock, C., & Nye, J. (2016). Distinct zooplankton regime shift patterns across ecoregions of the US Northeast continental shelf Large Marine Ecosystem. Journal of Marine Systems.

Yu, H., Zhang, M., Lin, W., & Zhang, X. (2016). Cloud transitions: comparison of temporal variation in the southeastern Pacific with the spatial variation in the northeastern Pacific at low latitudes. International Journal of Climatology.

Rauser, F., M. Alqadi, S. Arowolo, N. Baker, J. Bedard, E. Behrens, N. Dogulu, L.G. Domingues, A. Frassoni, J. Keller, S. Kirkpatrick, G. Langendijk, M. Mirsafa, S. Mohammad, A.K. Naumann, M. Osman, K. Reed, M. Rothmüller, V. Schemann, A. Singh, S. Sonntag, F. Tummon, D. Victor, M.Q. Villafuerte, J.P. Walawender, and M. Zaroug, 2017: Earth System Science Frontiers: An Early Career Perspective. Bull. Amer. Meteor. Soc., 98, 1120–1127, https://doi.org/10.1175/BAMS-D-16-0025.1

Madigan, D. J., Chiang, W. C., Wallsgrove, N. J., Popp, B. N., Kitagawa, T., Choy, C. A., … & Sun, C. L. (2016). Intrinsic tracers reveal recent foraging ecology of giant Pacific bluefin tuna at their primary spawning grounds. Marine Ecology Progress Series, 553, 253-266.

Archer, C. L., Colle, B. A., Veron, D. L., Veron, F., & Sienkiewicz, M. J. (2016). On the predominance of unstable atmospheric conditions in the marine boundary layer offshore of the US northeastern coast. Journal of Geophysical Research: Atmospheres, 121(15), 8869-8885.

Geller, M. A., Zhou, T., & Yuan, W. (2016). The QBO, gravity waves forced by tropical convection, and ENSO. Journal of Geophysical Research: Atmospheres, 121(15), 8886-8895.

Lee, C. S., & Fisher, N. S. (2016). Methylmercury uptake by diverse marine phytoplankton. Limnology and Oceanography, 61(5), 1626-1639.

Hannides, A. K., & Aller, R. C. (2016). Priming effect of benthic gastropod mucus on sedimentary organic matter remineralization. Limnology and Oceanography.

Stubler, A. D., & Peterson, B. J. Ocean acidification accelerates net calcium carbonate loss in a coral rubble community. Coral Reefs, 1-9.

Chang, E. K., & Yau, A. M. (2016). Northern Hemisphere winter storm track trends since 1959 derived from multiple reanalysis datasets. Climate Dynamics, 47(5-6), 1435-1454.

Colle, B. A., Sienkiewicz, M. J., Archer, C., Veron, D., Veron, F., Kempton, W., & Mak, J. E. (2015). Improving the Mapping and Prediction of Offshore Wind Resources (IMPOWR): Experimental Overview and First Results. Bulletin of the American Meteorological Society, (2015).

Dasgupta, S., Di Giulio, R. T., Drollette, B. D., Plata, D., Brownawell, B. J., & McElroy, A. E. (2016). Hypoxia depresses CYP1A induction and enhances DNA damage, but has minimal effects on antioxidant responses in sheepshead minnow (Cyprinodon variegatus) larvae exposed to dispersed crude oil. Aquatic Toxicology.

Knoll, K., Landman, N. H., Cochran, J. K., Macleod, K. G., & Sessa, J. A. (2016). Microstructural preservation and the effects of diagenesis on the carbon and oxygen isotope composition of Late Cretaceous aragonitic mollusks from the Gulf Coastal Plain and the Western Interior Seaway. American Journal of Science, 316(7), 591-613.

Theis, K. R., Dheilly, N. M., Klassen, J. L., Brucker, R. M., Baines, J. F., Bosch, T. C., … & Sapp, J. (2016). Getting the hologenome concept right: An eco-evolutionary framework for hosts and their microbiomes. mSystems, 1(2), e00028-16.

Stubler, A. D., Jackson, L. J., Furman, B. T., & Peterson, B. J. (2016). Seed Production Patterns in Zostera marina: Effects of Patch Size and Landscape Configuration. Estuaries and Coasts, 1-9.

Moffet, R. C., O’Brien, R. E., Alpert, P., Kelly, S. T., Pham, D. Q., Gilles, M. K., … & Laskin, A. Morphology and Mixing of BC Particles Collected in Central California During the CARES Field Study.

Hahn, M. A., & Dheilly, N. M. (2016). Experimental models to study the role of microbes in host-parasite interactions. Frontiers in Microbiology, 7.

Uno, S., Kokushi, E., Kawano, M., McElroy, A. E., & Koyama, J. (2016). Toxic evaluations of sediments in Tokyo Bay, Japan, using Japanese medaka embryos. Environmental Science and Pollution Research, 1-8.

Wang, K., Espinosa, E. P., & Allam, B. (2016). Effect of “heat shock” treatments on QPX disease and stress response in the hard clam, Mercenaria mercenaria. Journal of invertebrate pathology, 138, 39-49.

Rodriguez-Mora, M. J., Edgcomb, V. P., Taylor, C., Scranton, M. I., Taylor, G. T., & Chistoserdov, A. Y. (2016). The diversity of sulfide oxidation and sulfate reduction genes expressed by the bacterial communities of the Cariaco Basin, Venezuela. The open microbiology journal, 10, 140.

Patton, E. G., Guenther, A. B., Shepson, P. B., Miller, D. O., Brune, W. H., Misztal, P. K., … & Mak, J. E. (2016). Understanding isoprene photooxidation using observations and modeling over a subtropical forest in the southeastern US. Atmospheric Chemistry and Physics, 16(12), 7725.

Sagarese, S. R., Frisk, M. G., Cerrato, R. M., Sosebee, K. A., Musick, J. A., & Rago, P. J. (2016). Diel Variations in Survey Catch Rates and Survey Catchability of Spiny Dogfish and their Pelagic Prey in the Northeast US Continental Shelf Large Marine Ecosystem. Marine and Coastal Fisheries, 8(1), 244-262.

Bacmeister, J. T., Reed, K. A., Hannay, C., Lawrence, P., Bates, S., Truesdale, J. E., … & Levy, M. (2016). Projected changes in tropical cyclone activity under future warming scenarios using a high-resolution climate model. Climatic Change, 1-14.

Swanson, R. L., Lwiza, K., Willig, K., & Morris, K. (2016). Superstorm Sandy marine debris wash-ups on Long Island—What happened to them?. Marine pollution bulletin.

Breece, M. W., Fox, D. A., Dunton, K. J., Frisk, M. G., Jordaan, A., & Oliver, M. J. (2016). Dynamic seascapes predict the marine occurrence of an endangered species: Atlantic Sturgeon Acipenser oxyrinchus oxyrinchus. Methods in Ecology and Evolution.

Wehrmann, L.M. and Riedinger, N., 2016. The Sedimentary Deep Subseafloor Biosphere, Reference Module in Earth Systems and Environmental Sciences. Elsevier. http://dx.doi.org/10.1016/B978-0-12-409548-9.09741-4

Hu, Z., Wang, D. P., Pan, D., He, X., Miyazawa, Y., Bai, Y., … & Gong, F. (2016). Mapping surface tidal currents and Changjiang plume in the East China Sea from Geostationary Ocean Color Imager. Journal of Geophysical Research: Oceans.

Hall, D. M., Ullrich, P. A., Reed, K. A., Jablonowski, C., Nair, R. D., & Tufo, H. M. (2016). Dynamical Core Model Intercomparison Project (DCMIP) tracer transport test results for CAM‐SE. Quarterly Journal of the Royal Meteorological Society, 142(697), 1672-1684.

Urmy, S. S., Williamson, C. E., Leach, T. H., Schladow, S. G., Overholt, E. P., & Warren, J. D. (2016). Vertical redistribution of zooplankton in an oligotrophic lake associated with reduction in ultraviolet radiation by wildfire smoke. Geophysical Research Letters, 43(8), 3746-3753.

Karimi, R., Chen, C. Y., & Folt, C. L. (2016). Comparing nearshore benthic and pelagic prey as mercury sources to lake fish: the importance of prey quality and mercury content. Science of The Total Environment, 565, 211-221.

Rahman, S., Aller, R. C., & Cochran, J. K. (2016). Cosmogenic 32Si reveals biogenic silica burial in deltas rivals the Southern Ocean siliceous ooze. Geophysical Research Letters, 43, 7124-7142.

Zhang, M., Somerville, R. C., & Xie, S. (2016). The SCM concept and creation of ARM forcing datasets. Meteorological Monographs, 57, 24-1.

Madigan, D.J., Chiang, W.C., Wallsgrove, N.J., Popp, B.N., Kitagawa, T., Choy, C.A., Tallmon, J., Ahmed, N., Fisher, N.S. and Sun, C.L., (2016). Intrinsic tracers reveal recent foraging ecology of giant Pacific bluefin tuna at their primary spawning grounds. Marine Ecology Progress Series, 553, pp.253-266.

Swanson, L., Dorsch, M., Giampieri, M., Orton, P., Parris, A. S., & Sanderson, E. W. (2016). Dynamics of the Biophysical Systems of Jamaica Bay. In Prospects for Resilience (pp. 65-89). Island Press/Center for Resource Economics.

Harke, M. J., Steffen, M. M., Gobler, C. J., Otten, T. G., Wilhelm, S. W., Wood, S. A., & Paerl, H. W. (2016). A review of the global ecology, genomics, and biogeography of the toxic cyanobacterium, Microcystis spp. Harmful Algae, 54, 4-20.

Davis, T. W., & Gobler, C. J. (2016). Preface for Special Issue on “Global expansion of harmful cyanobacterial blooms: Diversity, ecology, causes, and controls”. Harmful Algae, 54, 1-3.

Gobler, C. J., Burkholder, J. M., Davis, T. W., Harke, M. J., Johengen, T., Stow, C. A., & Van de Waal, D. B. (2016). The dual role of nitrogen supply in controlling the growth and toxicity of cyanobacterial blooms. Harmful Algae, 54, 87-97.

Wang, L., Han, J., Sundahl, B., Thornton, S., Zhu, Y., Zhou, R., Jaye, C., Liu, H., Li, Z.Q., Taylor, G.T. and Fischer, D.A., 2016. Ligand-induced dependence of charge transfer in nanotube–quantum dot heterostructures. Nanoscale, 8(34), pp.15553-15570.

Thorne, L. H., Conners, M. G., Hazen, E. L., Bograd, S. J., Antolos, M., Costa, D. P., & Shaffer, S. A. (2016). Effects of El Niño-driven changes in wind patterns on North Pacific albatrosses. Journal of The Royal Society Interface, 13(119), 20160196.

Zarzycki, C. M., Reed, K. A., Bacmeister, J. T., Craig, A. P., Bates, S. C., & Rosenbloom, N. A. (2016). Impact of surface coupling grids on tropical cyclone extremes in high-resolution atmospheric simulations. Geoscientific Model Development, 9(2), 779-788.

Smirnov, O., Zhang, M., Xiao, T., Orbell, J., Lobben, A., & Gordon, J. (2016). The relative importance of climate change and population growth for exposure to future extreme droughts. Climatic Change, 138(1-2), 41-53.

Kalesse, H., Szyrmer, W., Kneifel, S., Kollias, P., & Luke, E. (2016). Fingerprints of a riming event on cloud radar Doppler spectra: observations and modeling. Atmospheric Chemistry and Physics, 16(5), 2997-3012.

Bender, N. A., Crosbie, K., & Lynch, H. J. (2016). Patterns of tourism in the Antarctic Peninsula region: a 20-year analysis. Antarctic Science, 28(03), 194-203.

Kim, H. M., Kim, D., Vitart, F., Toma, V. E., Kug, J. S., & Webster, P. J. (2016). MJO Propagation across the Maritime Continent in the ECMWF Ensemble Prediction System. Journal of Climate, 29(11), 3973-3988.

Laskin, A., Gilles, M. K., Knopf, D. A., Wang, B., & China, S. (2016). Progress in the analysis of complex atmospheric particles. Annual Review of Analytical Chemistry, 9, 117-143.

Bony, S., Stevens, B., Coppin, D., Becker, T., Reed, K. A., Voigt, A., & Medeiros, B. (2016). Thermodynamic control of anvil cloud amount. Proceedings of the National Academy of Sciences, 201601472.

Chen, C. Y., Ward, D. M., Williams, J. J., & Fisher, N. S. (2016). Metal bioaccumulation by estuarine food webs in New England, USA. Journal of marine science and engineering, 4(2), 41.

Gilbert, F., Hulth, S., Grossi, V., & Aller, R. C. (2016). Redox oscillation and benthic nitrogen mineralization within burrowed sediments: An experimental simulation at low frequency. Journal of Experimental Marine Biology and Ecology, 482, 75-84.

Woodin, S. A., Volkenborn, N., Pilditch, C. A., Lohrer, A. M., Wethey, D. S., Hewitt, J. E., & Thrush, S. F. (2016). Same pattern, different mechanism: Locking onto the role of key species in seafloor ecosystem process. Scientific Reports, 6, 26678.

Kawano, M., Uno, S., Koyama, J., Kokushi, E., & McElroy, A. (2016). Effects of oxygenated polycyclic aromatic hydrocarbons on the early life stages of Japanese medaka. Environmental Science and Pollution Research, 1-8.

Wang, W.-L., Armstrong, R. A., Cochran, J. K., and Heilbrun, C. (2016) 230Th and 234Th as coupled tracers of particle cycling in the ocean: A maximum likelihood approach., Deep Sea Research Part I: Oceanographic Research Papers, 111, 61-70., http://dx.doi.org/10.1016/j.dsr.2016.02.003.

Warren, J. D., Leach, T. H., & Williamson, C. E. (2016). Measuring the distribution, abundance, and biovolume of zooplankton in an oligotrophic freshwater lake with a 710 kHz scientific echosounder. Limnology and Oceanography: Methods.

Landman, N. H., Kruta, I., Denton, J. S., & Cochran, J. K. (2016). Getting unhooked: comment on the hypothesis that heteromorph ammonites were attached to kelp branches on the sea floor, as proposed by. Journal of Molluscan Studies, 82(2), 351-355

Pershing, A.J., Alexander, M.A., Hernandez, C.M., Kerr, L.A., Le Bris, A., Mills, K.E., Nye, J.A., Record, N.R., Scannell, H.A., Scott, J.D. and Sherwood, G.D., 2016. Response to Comments on “Slow adaptation in the face of rapid warming leads to collapse of the Gulf of Maine cod fishery”. Science, 352(6284), pp.423-423.

Shackell, N. L., Frank, K. T., Nye, J. A., & den Heyer, C. E. (2016). A transboundary dilemma: dichotomous designations of Atlantic halibut status in the Northwest Atlantic. ICES Journal of Marine Science: Journal du Conseil, fsw042.

Gobler, C. J., & Baumann, H. (2016). Hypoxia and acidification in ocean ecosystems: coupled dynamics and effects on marine life. Biology Letters, 12(5), 20150976.

Young, C. S., & Gobler, C. J. (2016). Ocean Acidification Accelerates the Growth of Two Bloom-Forming Macroalgae. PloS one, 11(5), e0155152.

Druffel, E. R. M., Beaupré, S. R., & Ziolkowski, L. A. (2016). Radiocarbon in the Oceans. In Radiocarbon and Climate Change (pp. 139-166). Springer International Publishing.

Chapperon, C., Volkenborn, N., Clavier, J., Séité, S., Seabra, R., & Lima, F. P. (2016). Exposure to solar radiation drives organismal vulnerability to climate: Evidence from an intertidal limpet. Journal of Thermal Biology, 57, 92-100.

Trumbore, S. E., Xu, X., Santos, G. M., Czimczik, C. I., Beaupré, S. R., Pack, M. A., … & Ziolkowski, L. (2016). Preparation for radiocarbon analysis. In Radiocarbon and Climate Change (pp. 279-315). Springer International Publishing.

Wehrmann, L. M., Ockert, C., Mix, A. C., Gussone, N., Teichert, B. M. A., & Meister, P. (2016). Repeated occurrences of methanogenic zones, diagenetic dolomite formation and linked silicate alteration in southern Bering Sea sediments (Bowers Ridge, IODP Exp. 323 Site U1341). Deep Sea Research Part II: Topical Studies in Oceanography, 125, 117-132.

Moore, M.J, McElroy, A.E. Geoghegan, P., Siskey, M.R. and Pembroke, A.E. 2016. Founder Monitoring Report: 2015 Results. Boston:Massachusetts Water Resources Authority. Report 2016-05. 40 pp.

Pandey, R., Usui, K., Livingstone, R. A., Fischer, S. A., Pfaendtner, J., Backus, E. H., Knopf, D.A. … & Scheel, J. F. (2016). Ice-nucleating bacteria control the order and dynamics of interfacial water. Science Advances, 2(4), e1501630.

Chen, J., Liu, Y., Zhang, M., & Peng, Y. (2016). New Understanding and Quantification of the Regime Dependence of Aerosol‐Cloud Interaction for Studying Aerosol Indirect Effects. Geophysical Research Letters.

Martinez, C. M., Rohlf, F. J., & Frisk, M. G. (2016). Sexual dimorphism in sister species of Leucoraja skate and its relationship to reproductive strategy and life history. Evolution & Development.

Cahill, A. E., & Levinton, J. S. (2016). Genetic differentiation and reduced genetic diversity at the northern range edge of two species with different dispersal modes. Molecular ecology, 25(2), 515-526.

Soulet, G., Skinner, L. C., Beaupré, S. R., & Galy, V. (2016). A Note on Reporting of Reservoir 14 C Disequilibria and Age Offsets. Radiocarbon, 58(1), 205-211.

Baines, S. B., Chen, X., Vogt, S., Fisher, N. S., Twining, B. S., & Landry, M. R. (2016). Microplankton trace element contents: implications for mineral limitation of mesozooplankton in an HNLC area. Journal of Plankton Research, fbv109.

Trammell, J. H., Jiang, X., Li, L., Kao, A., Zhang, G. J., Chang, E. K., & Yung, Y. (2016). Temporal and Spatial Variability of Precipitation from Observations and Models*. Journal of Climate, 29(7), 2543-2555.

Bluestein, H. B., French, M. M., Snyder, J. C., & Houser, J. B. (2016). Doppler Radar Observations of Anticyclonic Tornadoes in Cyclonically Rotating, Right-Moving Supercells. Monthly Weather Review, 144(4), 1591-1616.

Fisher, S. C., Phillips, P. J., Brownawell, B. J., & Browne, J. P. (2016). Comparison of wastewater-associated contaminants in the bed sediment of Hempstead Bay, New York, before and after Hurricane Sandy. Marine Pollution Bulletin.

Levy, H., Clucas, G.V., Rogers, A.D., Leaché, A.D., Ciborowski, K.L., Polito, M.J., Lynch, H.J., Dunn, M.J. and Hart, T., (2016). Population structure and phylogeography of the Gentoo Penguin (Pygoscelis papua) across the Scotia Arc. Ecology and evolution.

Griffith, A. W., & Gobler, C. J. (2016). Temperature controls the toxicity of the ichthyotoxic dinoflagellate Cochlodinium polykrikoides. MEPS, 545, 63-76.

Reed, K. A., & Medeiros, B. (2016). A reduced complexity framework to bridge the gap between AGCMs and cloud‐resolving models. Geophysical Research Letters.

Pascal, L., Maire, O., Volkenborn, N., Lecroart, P., Bichon, S., de Montaudouin, X., … & Deflandre, B. (2016). Influence of the mud shrimp Upogebia pusilla (Decapoda: Gebiidea) on solute and porewater exchanges in an intertidal seagrass (Zostera noltei) meadow of Arcachon Bay: An experimental assessment. Journal of Experimental Marine Biology and Ecology, 477, 69-79.

Sanchez-Franks, A., Hameed, S., & Wilson, R. E. (2015). The Icelandic Low as a Predictor of the Gulf Stream Northwall Position. Journal of Physical Oceanography, (2015).

Allam, B., & Espinosa, E. P. (2016). Bivalve immunity and response to infections: Are we looking at the right place?. Fish & Shellfish Immunology.

Moniruzzaman, M., Gann, E. R., LeCleir, G. R., Kang, Y., Gobler, C. J., & Wilhelm, S. W. (2016). Diversity and dynamics of algal Megaviridae members during a harmful brown tide caused by the pelagophyte, Aureococcus anophagefferens. FEMS Microbiology Ecology, fiw058.

Chapperon, C., Volkenborn, N., Clavier, J., Séité, S., Seabra, R., & Lima, F. P. (2016). Exposure to solar radiation drives organismal vulnerability to climate: Evidence from an intertidal limpet. Journal of Thermal Biology, 57, 92-100.

Witharana, C., LaRue, M. A., & Lynch, H. J. (2016). Benchmarking of data fusion algorithms in support of earth observation based Antarctic wildlife monitoring. ISPRS Journal of Photogrammetry and Remote Sensing, 113, 124-143.

Karimi, R., Vacchi-Suzzi, C., & Meliker, J. R. (2016). Mercury exposure and a shift toward oxidative stress in avid seafood consumers. Environmental research, 146, 100-107.

Chang, E. K., Ma, C. G., Zheng, C., & Yau, A. M. (2016). Observed and projected decrease in Northern Hemisphere extratropical cyclone activity in summer and its impacts on maximum temperature. Geophysical Research Letters, 43(5), 2200-2208.

Wang, K., del Castillo, C., Corre, E., Espinosa, E. P., & Allam, B. (2016). Clam focal and systemic immune responses to QPX infection revealed by RNA-seq technology. BMC genomics, 17(1), 1.

Choi, J., Son, S. W., Ham, Y. G., Lee, J. Y., & Kim, H. M. (2016). Seasonal-to-interannual prediction skills of near-surface air temperature in the CMIP5 decadal hindcast experiments. Journal of Climate, (2016).

Giner, J. L., Ceballos, H., Tang, Y. Z., & Gobler, C. J. (2016). Sterols and Fatty Acids of the Harmful Dinoflagellate Cochlodinium polykrikoides. Chemistry & biodiversity, 13(2), 249-252.

O’Leary, S. J., Martinez, C. M., Baumann, H., Abercrombie, D. L., Poulakis, G. R., Murray, C. H., … & Chapman, D. D. (2016). Population genetics and geometric morphometrics of the key silverside, Menidia conchorum, a marine fish in a highly-fragmented, inland habitat. Bulletin of Marine Science.

Espinosa, E. P., Cerrato, R. M., Wikfors, G. H., & Allam, B. (2016). Modeling food choice in the two suspension-feeding bivalves, Crassostrea virginica and Mytilus edulis. Marine Biology, 163(2), 1-13.

Ladino, L.A., Yakobi-Hancock, J.D., Kilthau, W.P., Mason, R.H., Si, M., Li, J., Miller, L.A., Schiller, C.L., Huffman, J.A., Aller, J.Y. and Knopf, D.A., 2016. Addressing the ice nucleating abilities of marine aerosol: A combination of deposition mode laboratory and field measurements. Atmospheric Environment.

Volkenborn N., Woodin S.A., Wethey D.S., Polerecky L. (2016) Bioirrigation in marine sediments. Reference Module in Earth Systems and Environmental Sciences. DOI: 10.1016/B978-0-12-409548-9.09525-7

Cahill, A. E., & Levinton, J. S. (2016). Genetic differentiation and reduced genetic diversity at the northern range edge of two species with different dispersal modes. Molecular ecology, 25(2), 515-526.

Pinaud, S., Portela, J., Duval, D., Nowacki, F.C., Olive, M.A., Allienne, J.F., Galinier, R., Dheilly, N.M., Kieffer-Jaquinod, S., Mitta, G. and Théron, A., 2016. A Shift from Cellular to Humoral Responses Contributes to Innate Immune Memory in the Vector Snail Biomphalaria glabrata. PLoS Pathog, 12(1), p.e1005361.

Hattenrath-Lehmann, T. K., Zhen, Y., Wallace, R. B., Tang, Y. Z., & Gobler, C. J. (2016). Mapping the distribution of cysts from the toxic dinoflagellate, Cochlodinium polykrikoides, in bloom-prone estuaries using a novel fluorescence in situ hybridization assay. Applied and environmental microbiology, 82 (4):1114-1125; 10.1128/AEM.03457-15 FEB 2016

Liu, P., Zhang, Q., Zhang, C., Zhu, Y., Khairoutdinov, M., Kim, H. M., … & Zhang, M. (2016). A Revised Real-Time Multivariate MJO Index. Monthly Weather Review, 144 (2):627-642; 10.1175/MWR-D-15-0237.1 FEB 2016

Li, Y., & Zhang, M. (2016). Cumulus over the Tibetan Plateau in the Summer Based on CloudSat-CALIPSO Data. Journal of Climate, 29 (3):1219-1230; 10.1175/JCLI-D-15-0492.1 FEB 2016.

Chapman, D. D., Feldheim, K.A., Papastamatiou, Y., Hueter, R.H. There and Back Again: A review of residency and return migrations in sharks, with implications for population structure and management. Annual Reviews in Marine Science (Available online in advance of publication).

Ashe, J., Feldheim, K.A., Fields, A., Brooks, E.J., Skomal, G., Gruber, S.H., Chapman, D. D. (In Press). Local population structure and context-dependent isolation by distance in a large coastal shark. Marine Ecology Progress Series.

Kessel, S.T., Chapman, D. D., Franks, B. R., Gedamke, T., Gruber, S. H., Newman, M.J., White, E. R., Perkins, R. G. (In Press). Predictable temperature regulated residency, movement and migration in a large, highly-mobile marine predator. Marine Ecology Progress Series.

Alpert, P. A. & Knopf, D. A. (2016). Analysis of isothermal and cooling-rate-dependent immersion freezing by a unifying stochastic ice nucleation model, Atmospheric Chemistry and Physics 16 (4), 2083-2107

Stubler, A. D., A. K. Stevens and B. J. Peterson. 2016. Using community-wide recruitment and succession patterns to assess sediment stress on Jamaican coral reefs. Journal of Experimental Marine Biology and Ecology 474: 29-38.

Giner, J. L., Ceballos, H., Tang, Y. Z., & Gobler, C. J. (2016). Sterols and Fatty Acids of the Harmful Dinoflagellate Cochlodinium polykrikoides. Chemistry & Biodiversity, 13(2), 249-252.

Espinosa, E. P., Koller, A., & Allam, B. (2016). Proteomic characterization of mucosal secretions in the eastern oyster, Crassostrea virginica. Journal of proteomics, 132, 63-76. DOI information: 10.1016/j.jprot.2015.11.018

Baines, S.B., X. Chen, S. Vogt, N.S. Fisher, B.S. Twining, and M.R. Landry. In press. Elemental content of single-celled plankton in the Costa Rica Upwelling Dome and mineral limitation of mesozooplankton. Journal of Plankton Research

Baines, S.B., X. Chen, B.S. Twining, N.S. Fisher, and M.R. Landry. In press. Factors affecting Fe and Zn contents of mesozooplankton from the Costa Rica Dome. Journal of Plankton Research

Martinez, C.M., F.J. Rohlf and M.G. Frisk (In Press). Sexual dimorphism in sister species of Leucoraja skate and its relationship to reproductive strategy and life history. Evolution & Development.

Li, H., & Colle, B. A. 2015: Future Changes in Convective Storm Days over the Northeastern United States Using Linear Discriminant Analysis Applied to CMIP5 Predictions. J. Climate. doi: http://dx.doi.org/10.1175/JCLI-D-14-00831.1.

Colle, B. A., Sienkiewicz, M. J., Archer, C., Veron, D., Veron, F., Kempton, W., & Mak, J. E. (2016). Improving the mapping and prediction of offshore wind resources (IMPOWR): Experimental overview and first results. Bulletin of the American Meteorological Society, 97(8), 1377-1390.

Pascal, L., Maire, O., Volkenborn, N., Lecroart, P., Bichon, S., de Montaudouin, X., … & Deflandre, B. (2016). Influence of the mud shrimp Upogebia pusilla (Decapoda: Gebiidea) on solute and porewater exchanges in an intertidal seagrass (Zostera noltei) meadow of Arcachon Bay: An experimental assessment. Journal of Experimental Marine Biology and Ecology, 477, 69-79.

Dunton, K. J., Jordaan, A., Secor, D. H., Martinez, C. M., Kehler, T., Hattala, K. A., … & Frisk, M. G. (2016). Age and Growth of Atlantic Sturgeon in the New York Bight. North American Journal of Fisheries Management, 36(1), 62-73.

Trammell, J. H., Jiang, X., Li, L., Kao, A., Zhang, G. J., Chang, E. K., & Yung, Y. (2016). Temporal and Spatial Variability of Precipitation from Observation and Model. Journal of Climate, (2016).

Espinosa, E. P., Cerrato, R. M., Wikfors, G. H., & Allam, B. (2016). Modeling food choice in the two suspension-feeding bivalves, Crassostrea virginica and Mytilus edulis. Marine Biology, 163(2), 1-13.

Martinez, C. M., Rohlf, F. J., & Frisk, M. G. (2016). Re‐evaluation of batoid pectoral morphology reveals novel patterns of diversity among major lineages. Journal of morphology, 277(4), 482-493.

Erickson, M. J., Charney, J. J., & Colle, B. A. (2015). Development of a Fire Weather Index Using Meteorological Observations within the Northeast United States. Journal of Applied Meteorology and Climatology, (2015).

Cuesta, F., Muriel, P., Llambi, L.D., Halloy, S., Aguirre, N., Beck, S., Carilla, J., Menses, R.I., Cuello, S., Grau, A., Gamez, L., Irazabel, J., Jacome, J., Jaramillo, R., Ramirez, L., Samaniego, N., Suarez-Duque, D., Thompson, N., Tupuachi, A., Viñas, P., Yager, K., Becerra, M., Pauli, H., Gosling, W. (2016) Latitudinal and altitudinal patterns of plant community diversity on mountain summits across the tropical Andes. Ecography

Wang, X. H., Wang, D. P., Sun, Z., He, Z., Liu, H., Guan, W., … & Bao, X. (2016). International scientists discuss impact on China’s estuarine and coastal environment by intensive anthropogenic activities–The 2nd workshop on sediment dynamics of muddy coasts and estuaries: Physics, biology and their interactions, Zhoushan, China, 23–26 October, 2015. Estuarine, Coastal and Shelf Science, 168, ii-iii.

Espinosa, E. P., Koller, A., & Allam, B. (2016). Proteomic characterization of mucosal secretions in the eastern oyster, Crassostrea virginica. Journal of proteomics, 132, 63-76.

Wang, K., Espinosa, E. P., Tanguy, A., & Allam, B. (2016). Alterations of the immune transcriptome in resistant and susceptible hard clams (Mercenaria mercenaria) in response to Quahog Parasite Unknown (QPX) and temperature. Fish & shellfish immunology, 49, 163-176.

Stubler, A. D., Stevens, A. K., & Peterson, B. J. (2016). Using community-wide recruitment and succession patterns to assess sediment stress on Jamaican coral reefs. Journal of Experimental Marine Biology and Ecology,474, 29-38.

Martinez, C. M., Rohlf, F. J. and Frisk, M. G. (2016), Sexual dimorphism in sister species of Leucoraja skate and its relationship to reproductive strategy and life history. Evolution & Development. doi: 10.1111/ede.12175

Pochron, S. (2016) Monkeys In The Garden Irven DeVore and the Revolution in the Science of Social Behavior. Smashwords.

Pochron, S. (2016) Monkeys In The Garden Irven DeVore and the Revolution in the Science of Social Behavior. Smashwords.

Rider, Tara. The Once and Future Queen: The Imagining and Reimagining of Ireland. 2016. New Trails and Beaten Paths in Celtic Studies.

Tang, S., Zhang, M., & Xie, S. (2016). An ensemble constrained variational analysis of atmospheric forcing data and its application to evaluate clouds in CAM5. Journal of Geophysical Research: Atmospheres, 121(1), 33-48.

Yee, A. K., & Padilla, D. K. (2015). Allometric Scaling of the Radula in the Atlantic Slippersnail Crepidula fornicata. Journal of Shellfish Research, 34(3), 903-907.

Bretherton, C. S., & Khairoutdinov, M. F. (2015). Convective self‐aggregation feedbacks in near‐global cloud‐resolving simulations of an aquaplanet. Journal of Advances in Modeling Earth Systems.

Supinie, T. A., Jung, Y., Xue, M., Stensrud, D. J., French, M. M., & Bluestein, H. B. (2015). Impact of VORTEX2 Observations on Analyses and Forecasts of the 5 June 2009 Goshen County, Wyoming, Supercell. Monthly Weather Review, (2015).

Bokuniewicz, H., Cochran, J. K., Garcia-Orellana, J., Rodellas, V., Daniel, J. W., & Heilbrun, C. (2015). Intertidal percolation through beach sands as a source of 224,223 Ra to Long Island Sound, New York, and Connecticut, United States. Journal of Marine Research, 73(5), 123-140.

Baumann, H., Wells, R. J. D., Rooker, J. R., Zhang, S., Baumann, Z., Madigan, D. J., … & Fisher, N. S. (2015). Combining otolith microstructure and trace elemental analyses to infer the arrival of juvenile Pacific bluefin tuna in the California current ecosystem. ICES Journal of Marine Science: Journal du Conseil, 72(7), 2128-2138.

Allam, B., and Raftos, D., Immune responses to infectious diseases in bivalves, Journal of Invertebrate Pathology 131: 121-136, ISSN 0022-2011,http://dx.doi.org/10.1016/j.jip.2015.05.005.

Allam, B., & Espinosa, P. E. (2015, April). The multiple, central, roles of mucosal secretions in marine bivalves. In INTEGRATIVE AND COMPARATIVE BIOLOGY (Vol. 55, pp. E4-E4). JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA: OXFORD UNIV PRESS INC.

McCann, M. J., & Padilla, D. K. (2015). Effects of a patchy food environment across life history stages. Journal of Experimental Marine Biology and Ecology, 472, 135-141.

Alpert, P. A., & Knopf, D. A. (2015). Analysis of isothermal and cooling rate dependent immersion freezing by a unifying stochastic ice nucleation model. Atmospheric Chemistry and Physics Discussions, 15(9), 13109-13166.

Fritts, D. C., Wang, L., Geller, M. A., Lawrence, D. A., Werne, J., & Balsley, B. B. (2015). Numerical Modeling of Multi-Scale Dynamics at a High Reynolds Number: Instabilities, Turbulence, and an Assessment of Ozmidov and Thorpe Scales. Journal of the Atmospheric Sciences, (2015).

Baines, S. B., Chen, X., Twining, B. S., Fisher, N. S., & Landry, M. R. (2015). Factors affecting Fe and Zn contents of mesozooplankton from the Costa Rica Dome. Journal of Plankton Research, fbv098.

Khairoutdinov, M., & Zhou, X. (2015, April). Changes in sub-daily precipitation extremes in a global climate model with super-parameterization under CO2 warming. In EGU General Assembly Conference Abstracts (Vol. 17, p. 7931).

Gribble, M. O., Karimi, R., Feingold, B. J., Nyland, J. F., O’Hara, T. M., Gladyshev, M. I., & Chen, C. Y. (2015). Mercury, selenium and fish oils in marine food webs and implications for human health. Journal of the Marine Biological Association of the United Kingdom, 1-17.

Zhou, X-H, D-P. Wang, and D. Chen, 2015b. Validating satellite altimeter measurements of internal tides with long-term TAO/TRITON buoy observations at 2oS-156oE. Geophy. Res. Lett., 42, doi:10.1002/2015GL063669.

Wang L; Han J, Zhu Y, Zhou R, Jaye C, Liu H, Li Z-Q, Taylor G, Fischer D, Appenzelle, J, Wong SS. 2015. Probing the dependence of electron transfer on size and coverage in carbon nanotube-quantum dot heterostructures. J Phys Chem 119: 26327–26338

Chao Ye, Weihua Qiao, Xiaobin Yu, Xiaojun Ji, He Huang, J. L. Collier, Liming Liu. 2015. Reconstruction and analysis of the genome-scale metabolic model ofschizochytrium limacinum SR21 for docosahexaenoic acid production. BMC Genomics 16 :799 (11pp). DOI 10.1186/s12864-015-2042-y

Mars Brisbin M, McElroy A, Pales Espinosa E, Allam B. 2015. Antimicrobial activity in the cuticle of the American lobster, Homarus americanus. Fish and Shellfish Immunology. 44: 542-546.

Lin, Yanluan Lin, Ming Zhao and Minghua Zhang, 2015: Tropical cyclone rainfall area controlled by relative sea surface temperature, Nature Communications 6, 6591m doi:10.1038/ncomms7591

Ridley, H.E., Y. Asmerom, J.U.L. Baldini, S.F.M. Breitenbach, V.V. Aquino, K.M. Prufer, Brendan J. Culleton, V. Polyak, F.A. Lechleitner, D.J. Kennett, M. Zhang, N. Marwan, C.G. Macpherson, L.M. Baldini, T. Xiao, J.L. Peterkin, J. Awe, G.H. Haug, 2015: Aerosol forcing of the position of the intertropical convergence zone since AD 1550. Nat. Geosci., 8 (2015)http://dx.doi.org/10.1038/ngeo2353

Zhang, M., 2015. Coupled Ocean-Atmosphere Models: Physical Processes. P144-152, In: Gerald R.North (editor-in-chief), John Pyle and Fuqing Zhang (editors). Encyclopedia of Atmospheric Sciences, 2nd edition, Vol 4, pp. 144–152. ISBN: 9780123822253, 2998pp, Copyright © 2015 Elsevier Ltd.

Walcker, R., E. J. Anthony, C. Cassou, R.C. Aller, A. Gardel, C. Proisy, J.-M. Martinez, and F. Fromard, 2015, Fluctuations in the extent of mangroves driven by multi-decadal changes in North Atlantic waves. J. Biogeogr., 42, 2209-2219.

A. J. Illingworth, H. W. Barker, A. Beljaars, M. Ceccaldi, H. Chepfer, N. Clerbaux, J. Cole, J. Delanoë, C. Domenech, D. P. Donovan, S. Fukuda, M. Hirakata, R. J. Hogan, A. Huenerbein, P. Kollias, T. Kubota, T. Nakajima, T. Y. Nakajima, T. Nishizawa, Y. Ohno, H. Okamoto, R. Oki, K. Sato, M. Satoh, M. W. Shephard, A. Velázquez-Blázquez, U. Wandinger, T. Wehr, and G.-J. van Zadelhoff, (2015), The EarthCARE Satellite: The Next Step Forward in Global Measurements of Clouds, Aerosols, Precipitation, and Radiation. Bull. Amer. Meteor. Soc., 96, 1311–1332. doi: http://dx.doi.org/10.1175/BAMS-D-12-00227.1

Robert Wood, Matthew Wyant, Christopher S. Bretherton, Jasmine Rémillard, Pavlos Kollias, Jennifer Fletcher, Jayson Stemmler, Simone de Szoeke, Sandra Yuter, Matthew Miller, David Mechem, George Tselioudis, J. Christine Chiu, Julian A. L. Mann, Ewan J. O’Connor, Robin J. Hogan, Xiquan Dong, Mark Miller, Virendra Ghate, Anne Jefferson, Qilong Min, Patrick Minnis, Rabindra Palikonda, Bruce Albrecht, Ed Luke, Cecile Hannay, and Yanluan Lin, (2015), Clouds, Aerosols, and Precipitation in the Marine Boundary Layer: An Arm Mobile Facility Deployment.Bull. Amer. Meteor. Soc., 96, 419–440. doi: http://dx.doi.org/10.1175/BAMS-D-13-00180.1

Chandra, A., Zhang, C., Kollias, P., Matrosov, S., and Szyrmer, W, (2015), Automated rain rate estimates using the Ka-band ARM zenith radar (KAZR), Atmos. Meas. Tech., 8, 3685-3699, doi:10.5194/amt-8-3685-2015.

Battaglia, A. and P. Kollias, (2015), Error Analysis of a Conceptual Cloud Doppler Stereoradar with Polarization Diversity for Better Understanding Space Applications. J. Atmos. Oceanic Technol., 32, 1298–1319. doi: http://dx.doi.org/10.1175/JTECH-D-14-00015.1

Maximilian Maahn, Ulrich Löhnert, Pavlos Kollias, Robert C. Jackson, and Greg M. McFarquhar, (2015), Developing and Evaluating Ice Cloud Parameterizations for Forward Modeling of Radar Moments Using in situ Aircraft Observations. J. Atmos. Oceanic Technol., 32, 880–903. doi: 10.1175/JTECH-D-14-00112.1

Gail Skofronick-Jackson, David Hudak, Walter Petersen, Stephen W. Nesbitt, V. Chandrasekar, Stephen Durden, Kirstin J. Gleicher, Gwo-Jong Huang, Paul Joe, Pavlos Kollias, Kimberly A. Reed, Mathew R. Schwaller, Ronald Stewart, Simone Tanelli, Ali Tokay, James R. Wang, and Mengistu Wolde, (2015), Global Precipitation Measurement Cold Season Precipitation Experiment (GCPEX): For Measurement’s Sake, Let It Snow. Bull. Amer. Meteor. Soc., 96, 1719–1741. doi: http://dx.doi.org/10.1175/BAMS-D-13-00262.1

Mechem, D. B., Giangrande, S. E., Wittman, C. S., Borque, P., Toto, T. and Kollias, P. (2015), Insights from modeling and observational evaluation of a precipitating continental cumulus event observed during the MC3E field campaign. J. Geophys. Res. Atmos., 120, 1980–1995. doi: 10.1002/2014JD022255.

Gledhill, D.K., M.M. White, J. Salisbury, H. Thomas, I. Mlsna, M. Liebman, B. Mook, J. Grear, A.C. Candelmo, R.C. Chambers, C.J. Gobler, C.W. Hunt, A.L. King, N.N. Price, S.R. Signorini, E. Stancioff, C. Stymiest, R.A. Wahle, J.D. Waller, N.D. Rebuck, Z.A. Wang, T.L. Capson, J.R. Morrison, S.R. Cooley, and S.C. Doney. (2015). Ocean and coastal acidification off New England and Nova Scotia. Oceanography 28(2), 182–197, http://dx.doi.org/10.5670/oceanog.2015.41

Feng, S., Li, Z., Liu, Y., Lin, W., Zhang, M., Toto, T., … & Endo, S. (2015). Development of fine‐resolution analyses and expanded large‐scale forcing properties: 2. Scale awareness and application to single‐column model experiments. Journal of Geophysical Research: Atmospheres.

Michael J McCann and Dianna K Padilla 2015. Effects of a patchy food environment across life history stages. Journal of Experimental Marine Biology and Ecology 472: 135-141.

Alexander Y. Karatayev, Demetrio Boltovskoy, Lyubov Burlakova and Dianna K. Padilla 2015. Parallels and contrasts between Limnoperna fortunei and species of Dreissena. In: Limnoperna fortunei: the ecology, distribution and control of a swiftly spreading invasive fouling mussel, Demetrio Boltovskoy, Editor. Springer.

Alexander Y. Karatayev, Lyubov E. Burlakova, Sergey E. Mastitsky, and Dianna K. Padilla 2015. Predicting the spread of aquatic invaders: insight from 200 years of invasion by zebra mussels. Ecological Applications 25: 430-440.

Alexander Y. Karatayev, Lyubov E. Burlakova and Dianna K. Padilla. 2015. Zebra versus quagga mussels: a review of their spread, population dynamics, and ecosystem impacts. Hydrobiologia 746: 97-112.

Chapman, D. D., Feldheim, K. A., Papastamatiou, Y. P., & Hueter, R. E. (2015). There and Back Again: A Review of Residency and Return Migrations in Sharks, with Implications for Population Structure and Management. Annual review of marine science, 7, 547-570.

Ashe, J. L., Feldheim, K. A., Fields, A. T., Reyier, E. A., Brooks, E. J., O’Connell, M. T., … & Chapman, D. D. (2015). Local population structure and context-dependent isolation by distance in a large coastal shark. Mar Ecol Prog Ser, 520, 203-216.

Watanabe, Y. Y., Goldman, K. J., Caselle, J. E., Chapman, D. D., & Papastamatiou, Y. P. (2015). Comparative analyses of animal-tracking data reveal ecological significance of endothermy in fishes. Proceedings of the National Academy of Sciences, 201500316.

Brooks, E. J., Brooks, A. M., Williams, S., Jordan, L. K., Abercrombie, D., Chapman, D. D., … & Grubbs, R. D. (2015). First description of deep-water elasmobranch assemblages in the Exuma Sound, The Bahamas. Deep Sea Research Part II: Topical Studies in Oceanography, 115, 81-91.

Fields, A. T., Feldheim, K. A., Poulakis, G. R., & Chapman, D. D. (2015). Facultative parthenogenesis in a critically endangered wild vertebrate. Current Biology, 25(11), R446-R447.

Tettelbach, S. T., B. J. Peterson, J. M. Carroll, B. T. Furman, S. W. T. Hughes, J. Havelin, J. R. Europe, D. M. Bonal, A. J. Weinstock and C. F. Smith. 2015. Aspiring to an Alternative Stable State: Rebuilding of Bay Scallop Populations and Fisheries Following Intensive Restoration. Marine Ecology Progress Series 529: 121-136.

Berry, D. L., J. A. Goleski, F. Koch, C. C. Wall, B. J. Peterson, O. R. Anderson and C. J. Gobler. 2015. Shifts in Cyanobacterial Strain Dominance during Onset of Harmful Algal Blooms in Florida Bay, USA. Molecular Ecology 70: 361-371.

Furman, B. T., L. J. Jackson, E. Bricker and B. J. Peterson. 2015. Sexual recruitment in Zostera marina: a patch to landscape-scale investigation. Limnology and Oceanography 60(2): 584-599.

Carroll, J. M., L. L. Jackson and B. J. Peterson. 2015. The effect of increasing habitat complexity on bay scallop survival in the presence of different decapod crustacean predators. Estuaries and Coasts 38: 1569-1579

Stubler, A. D., A. R. Duckworth and B. J. Peterson. 2015. Sedimentation affects sponge abundance, diversity and distribution on Jamaican coral reefs. Marine Pollution Bulletin 96: 261-270.

Stubler, A. D., B. T. Furman and B. J. Peterson. 2015. Sponge erosion under acidification and warming scenarios: differential impacts on living and dead coral. Global Change Biology 21(11): 4006-4020.

Furman, B. T. and B. J. Peterson. 2015. Sexual Recruitment in Zostera marina: Progress toward a Predictive Model. PLoS ONE 10(9): e0138206.

Trathan, P. N., P. García-Borboroglu, D. Boersma, C.-A. Bost, R. J. M. Crawford, G. T. Crossin, R. J. Cuthbert, P. Dann, L. S. Davis, S. De la Puente, U. Ellenberg, H.J. Lynch, T. Mattern, K. Pütz, P. J. Seddon, W. Trivelpiece, B. Wienecke. 2015. Assessing human impacts on marine systems, especially upon penguin species: how much do we care? Conservation Biology 29(1): 31-41.

Casanovas, P.V., R. Naveen, S. Forrest, J. Poncet, and H.J. Lynch. 2015. A comprehensive coastal seabird survey maps out the front lines of ecological change on the Western Antarctic Peninsula. Polar Biology 38: 927-940.

LaRue, M., G. Kooyman, H.J. Lynch, and P. Fretwell. 2015. Emigration in emperor penguins: Implications for interpretation of long-term studies. Ecography 38: 114-120.

Zhou, X., P. Kollias and E. Lewis, (2015), Clouds, Precipitation, and Marine Boundary Layer Structure during the MAGIC Field Campaign. J. Climate, 28, 2420–2442. doi: http://dx.doi.org/10.1175/JCLI-D-14-00320.1

Zermeno, D., C. Zhang, P. Kollias and H. Kalesse, (2015), Shallow Cloud Moistening in MJO and non-MJO Large-Scale Convective Events over the ARM Manus Site. J. Atmos. Sciences, doi: http://dx.doi.org/10.1175/JAS-D-14-0322.1

Lamer, K., P. Kollias, and L. Nuijens (2015), Observations of the variability of shallow trade wind cumulus cloudiness and mass flux. J. Geophys. Res. Atmos., 120, 6161–6178. doi: 10.1002/2014JD022950.

Marcus van Lier-Walqui, Ann Fridlind, Andrew Ackerman, Scott Collis, Jonathan Helmus, Donald MacGorman Kirk North, Pavlos Kollias and Derek Posselt, (2015), Polarimetric radar signatures of deep convection: characteristics of KDP columns observed during MC3E. Monthly Weather Review 2015; e-View doi: 10.1175/MWR-D-15-0100.1

Jiwen Fan, Yi-Chin Liu, Kuan-Man Xu, Kirk North, Scott Collis, Xiquan Dong, Guang J. Zhang, Qian Chen, Kollias Pavlos, and Steven J. Ghan, (2015), Improving Representation of Convective Transport for Scale-Aware Parameterization – Part I: Convection and Cloud Properties Simulated with Spectral-Bin and Bulk Microphysics. Accepted, Journal of Geophysical Research – Atmospheres

Kneifel, S., A.von Lerber, J. Tiira, D. Moisseev, P. Kollias, and J. Leinonen (2015), Observed relations between snowfall microphysics and triple-frequency radar measurements. J. Geophys. Res. Atmos., 120, 6034–6055. doi:10.1002/2015JD023156.

Jensen, M., et al., (2015), The Midlatitude Continental Convective Clouds Experiment (MC3E). Accepted to the Bulletin of the American Meteorological Society

Gownaris NJ, Pikitch EK, Ojwang WO, Michener R, Kaufman L (2015) Predicting Species’ Vulnerability in a Massively Perturbed System: The Fishes of Lake Turkana, Kenya. PLoS ONE 10(5): e0127027. doi:10.1371/journal.pone.0127027

Lin, W., Liu, Y., Vogelmann, A. M., Fridlind, A., Endo, S., Song, H., … & Zhang, M. (2015). RACORO Continental Boundary Layer Cloud Investigations. Part III: Separation of Parameterization Biases in Single‐Column Model CAM5 Simulations of Shallow Cumulus. Journal of Geophysical Research: Atmospheres.

Price, R. E., LaRowe, D. E., Italiano, F., Savov, I., Pichler, T., & Amend, J. P. (2015). Subsurface hydrothermal processes and the bioenergetics of chemolithoautotrophy at the shallow-sea vents off Panarea Island (Italy). Chemical Geology, 407, 21-45.

Engel, B.E; Hallock, P; Price, R.E.; and Pichler, T. (2015). Shell dissolution in larger benthic foraminifers exposed to pH and temperature extremes: Results from an in situ experiment. Journal of Foraminiferal Research. 45 (2).

Dasgupta, S., Huang, I.J., and McElroy A. E. 2015. Hypoxia enhances the toxicity of Corexit EC9500A and CEWAFs prepared with Louisiana Sweet Crude Oil (MD-242) to sheepshead minnow (Cyprinodon variegatus) larvae. PLoS One. DOI:10.1371/journal.pone.0128939.

Romany, J.S., McElroy A.E., and Fast, M. 2015. Measures of immune system status in young-of-the-year winter flounder (Pseudopleuronectes americanus) from Long Island coastal bays. J. Fish. Biol. 86:148-161.

K. Park*, L. K. Emmons, Z. Wang and J. E. Mak, Joint Application of Concentration and δ18O to Investigate the Global Atmospheric CO Budget, Atmosphere, 6, 547-578; doi:10.3390/atmos6050547, 2015.

K. Park*, Z. Wang, L. K. Emmons, J. E. Mak, Variation of atmospheric CO, δ13C and δ18O at high northern latitude during 2004-2009: observations and model simulations, J. Geophys.Res.-Atmos., 120, 11,024–11,036, doi:10.1002/2015JD023191, 2015.

P.K. Misztal et al., inc. J.E. Mak, Atmospheric benzenoid emissions from plants rival those from fossil fuel, Nature Sci. Rep., 5, 12064, 2015.

L. Su*, E. G. Patton, J. Vilà-Guerau de Arellano, A. B. Guenther, L. Kaser, B. Yuan, F. Xiong, P. B. Shepson, L. Zhang, D. O. Miller, W. H. Brune, K. Baumann, E. Edgerton, A. Weinheimer, and J. E. Mak, Understanding isoprene photo-oxidation using observations and modeling over a subtropical forest in the Southeast US, Atmos. Chem. Phys. Discuss., 15, 31621-31663, doi:10.5194/acpd-15-31621-2015, 2015.

Thalman, R., Baeza-Romero, M. T., Ball, S. M., Borrás, E., Daniels, M. J. S., Goodall, I. C. A., Henry, S. B., Karl, T., Keutsch, F. N., Kim, S., Mak, J., Monks, P. S., Muñoz, A., Orlando, J., Peppe, S., Rickard, A. R., Ródenas, M., Sánchez, P., Seco, R., Su, L., Tyndall, G., Vázquez, M., Vera, T., Waxman, E., and Volkamer, R.: Instrument intercomparison of glyoxal, methyl glyoxal and NO2 under simulated atmospheric conditions, Atmos. Meas. Tech., 8, 1835-1862, doi:10.5194/amt-8-1835-2015, 2015.

Yoo, C., S. Park, D. Kim, J. H. Yoon, and H. M. Kim, 2015: Boreal winter MJO teleconnection in the Community Atmosphere Model version 5 with the Unified Convection parameterization, J. Climate, 28, 8135-8150

Thorne, L. H., E. L. Hazen, S.J. Bograd, D.G. Foley, M.G. Conners, M.A. Kappes, H. M. Kim, Y. Tremblay, D.P. Costa, and S.A. Shaffer, 2015: Foraging behavior links climate variability and reproduction in North Pacific albatrosses, Movement Ecology, 3:27, DOI: 10.1186/s40462-015-0050-9

Yu, J. 2015 Erratum for “Approximations of the Dispersion Relationship of Water Waves” by J. Yu. J. Eng. Mech., 141(7) . doi: 10.1061/(ASCE)EM.1943-7889.0000941

Yu, J. and Chen, S. 2015 Hydrodynamic instability mechanism for rip currents. Studies in Applied Mathematics. 135: 196-223. doi: 10.1111/sapm.12074

Weidman, P., Herczynski, A., Yu, J. and Howard, L. N. 2015 Experiments on normal modes in a tank with corrugated bottom. J. Fluid Mech., 777: 122-150. doi:10.1017/jfm.2015.318

Carlisle AB, Goldman KJ, Litvin SY, Madigan DJ, Bigman JS, Swithenbank AM, Kline Jr TC & BA Block. 2015. Stable isotope analysis of salmon shark vertebrae reveals ontogenetic changes in habitat in a pelagic shark. Proceedings Royal Society B 282: 20141446.

Madigan DJ. 2015. Understanding bluefin migration using intrinsic tracers in tissues in T. Kitagawa & S. Kimura (Eds.), Biology & Ecology of Bluefin Tuna. Boca Raton, FL: CRC Press.

Carlisle AB, Litvin SY, Hazen EL, Madigan DJ, Goldman KJ, Lea RN & BA Block. 2015. Reconstructing habitat use by juvenile salmon sharks links upwelling to strandings in the California Current. Marine Ecology Progress Series 525: 217-228.

Lyons K, Preti A, Madigan DJ, Wells RJD, Blasius ME, Snodgrass OE, Kacev D, Harris JD, Dewar H, Kohin S, MacKenzie K & CG Lowe. 2015. Insights into the life history and ecology of a large shortfin mako shark (Isurus oxyrinchus) captured in southern California. Journal of Fish Biology. DOI:10.1111/jfb.12709.

Madigan DJ, Brooks EJ, Bond ME, Gelsleichter J, Howey LA, Abercrombie DL, Brooks A & DD Chapman. 2015. Diet shift and associated site-fidelity of oceanic whitetip sharks (Carcharhinus longimanus) along the edge of the Great Bahama Bank. Marine Ecology Progress Series 529: 185-197. DOI: 10.3354/meps11302.

Madigan DJ, Carlisle AB, Gardner LD, Jayasundara N, Micheli F, Schaefer KM, Fuller DW & BA Block. 2015. Assessing niche width of endothermic fish from genes to ecosystem. PNAS 112(27): 8350-8355.

Harris, C.M., K. Lorenz, L.D.C. Fishpool, B. Lascelles, J. Cooper, N. Coria, J.P. Croxall, L.M. Emmerson, R. Fijn, P. Jouventin, M.A. LaRue, Y. Le Maho, H.J. Lynch, R. Naveen, S. Poncet, R.A. Phillips, C.J. Southwell, J.A. van Franeker, H. Weimerskirch, B. Wienecke, and E.J. Woehler. 2015. Important Bird Areas in Antarctica Summary 2015. BirdLife International and Environmental Research & Assessment Ltd., Cambridge.

Rona, P., V. Guida, M.I. Scranton, D. Gong, L. Macelloni, M. Pierdomenico, A. Diercks, V. Asper, and S. Haag. 2015. Hudson submarine canyon head offshore New York and New Jersey: A physical and geochemical investigation of a fertile habitat space. Deep-Sea Research II, 121, 213-232. http://dx.doi.org/10.1016/j/dsr2.2015.07.019

Pierdomenico, M., V.G. Guida, L. Macelloni, F.L. Chiocci, P.A. Rona, M.I. Scranton, V. Asper and A. Diercks. 2015. Sedimentary facies, geomorphic features and habitat distribution at the Hudson Canyon head from AUV multibeam data. Deep-Sea Research II, 121, 112-125. http://dx.doi.org/10.1016/j.dsr2.2015.04.016.

Rodriguez-Mora, M, M.I. Scranton, G.T. Taylor, and A.Y. Chistoserdov. 2015. The dynamics of the bacterial diversity in the redox transition and anoxic zones of the Cariaco Basin assessed by parallel tag sequencing. FEMS Microbiology Ecology, 91(9), fiv088. doi:10.1093/femsec/fiv088.

Pershing, A. J., M. A. Alexander, C. M. Hernandez, L. A. Kerr, A. Le Bris, K. E. Mills, J. A. Nye, N. R. Record, H. A. Scannell, J. D. Scott, G. D. Sherwood, A. C. Thomas. (2015) Slow adaptation in the face of rapid warming leads to the collapse of an iconic fishery. Science 350 (6262): 809-812.

Tommasi, D., J.A. Nye, C. Stock, J. Hare, M. Alexander, K. Drew (2015) Effect of environmental conditions on river herring freshwater survival: a coastwide perspective. Canadian Journal of Fisheries and Aquatic Sciences 72(7): 1037-1047.

Levinton, J., Lord, S., Higeshide. 2015, Are crabs stressed for water on a hot sand flat? Water loss and field water state of two species of intertidal fiddler crabs. J. Exp. Mar. Biol. Ecol. 469: 57-62.

Sebastiano, D., Levinton, J., Doall, M., Kamath, S. 2015, Using a shellfish harvest strategy to extract high nitrogen inputs in coastal bays: Practical and economic implications. Journal of Shellfish Research, 34: 573-583.

Gillett, David, J., Stephan B. Weisberg, Treda Grayson, Anna Hamilton, Virginia Hansen, Erik W. Leppo, Marguerite C. Pelletier, Angel Borja, Donald Cadien, Daniel Dauer, Robert Diaz, Margaret Dutch, Jeffery L. Hyland, Michael Kellog, Peter Larsen, Jeffrey Levinton, Roberto Llansó, Lawrence L. Lovel, Paul Montagna, Dean Pasko, Charles A. Phillips, Chet Rakocinski, J. Ananda Ranasinghe, Denise M. Sanger, Heliana Teixeira, Robert F. Van Dolah, Ronald G. Velarde, and Kathy I. Welch. 2015, Effect of ecological group classification schemes on performance of the AMBI benthic index in US coastal waters Ecological Indicators, 50: 99-107.

Cahill, A. E. and Levinton, J. S. 2015, Genetic differentiation and reduced genetic diversity at the northern range edge of two species with different dispersal modes. Mol Ecol. Accepted Author Manuscript. doi:10.1111/mec.13497

Vogelmann, A. M., Fridlind, A. M., Toto, T., Endo, S., Lin, W., Wang, J., … Zhang, MH & Khairoutdinov, M. (2015). RACORO Continental Boundary Layer Cloud Investigations. Part I: Case Study Development and Ensemble Large‐Scale Forcings. Journal of Geophysical Research: Atmospheres.

Alfaro, D. A., & Khairoutdinov, M. (2015). Thermodynamic constraints on the morphology of simulated midlatitude squall lines. Journal of the Atmospheric Sciences, (2015).

Liu, P., Zhang, Q., Zhang, C., Zhu, Y., Khairoutdinov, M., Kim, H. M., … & Zhang, M. (2015). A Revised Real-Time Multivariate MJO Index. Monthly Weather Review, (2015).

Dheilly NM, Duval D, Mouahid G, Emans R, Allienne J-F, Genthon C, Dubois E, Du Pasquier L, Adema C, Grunau C, Mitta G, and Gourbal B. (2015). Diverse Immunoglobulin-like domain containing lectins in the snail Biomphalaria glabrata. Journal of Developmental and Comparative Immunology 48(1): 234-243

Dheilly NM, Maure F, Ravallec M, Galinier R, Doyon J, Duval D, Leger L, Volkoff A-N, Misse D, Nidelet S, Demolomb V, Brodeur J, Gourbal B, Thomas F, Mitta G. (2015). Who is the puppet master? Replication of a parasitic wasp-associated virus correlates with host behavior manipulation. Proceedings of the Royal Society B Biological Sciences 282(1803) http://rspb.royalsocietypublishing.org/content/282/1803/20142773

Harke, M. J., Davis, T. W., Watson, S. B., & Gobler, C. J. (2015). Nutrient-controlled niche differentiation of western Lake Erie cyanobacterial populations revealed via metatranscriptomic surveys. Environmental science & technology.

Rachel E O’Brien, Bingbing Wang, Alexander Laskin, Nicole Riemer, Matthew West, Qi Zhang, Yele Sun, Xiao‐Ying Yu, Peter Alpert, Daniel A Knopf, Mary K Gilles, Ryan C Moffet (2015). Chemical imaging of ambient aerosol particles: Observational constraints on mixing state parameterization. Journal of Geophysical Research: Atmospheres, 120(18), 9591-9605.

Andrea M. Arangio, Jonathan H. Slade, Thomas Berkemeier, Ulrich Pöschl, Daniel A. Knopf, Manabu Shiraiwa (2015). Multiphase Chemical Kinetics of OH Radical Uptake by Molecular Organic Markers of Biomass Burning Aerosols: Humidity and Temperature Dependence, Surface Reaction, and Bulk Diffusion, J. Phys. Chem. A, 119, 4533−4544.

Sessa, J. A., E. Larina, K. Knoll, M. Garb, J. K. Cochran, B. T. Huber, K. G. MacLeod, and N. H. Landman (2015) Ammonite habitat revealed via isotopic composition and comparisons with co-occurring benthic and planktonic organisms. Proceedings Nat. Acad. Sci. DOI 10.1073/pnas.1507554112.

Landman, N. H., J. C. Grier, J. W. Grier, J. K. Cochran, and S. M. Klofak (2015) 3-D orientation and distribution of ammonites in a concretion from the Upper Cretaceous Pierre Shale of Montana. Swiss J Palaeontol. DOI 10.1007/s13358-015-0084-z.

Cochran, J. K., N. H. Landman, N. L. Larson, K. C. Meehan, M. Garb, and J. Brezina (2015) Geochemical evidence (C and Sr isotopes) for methane seeps as ammonite habitats in the Late Cretaceous (Campanian) Western Interior Seaway. Swiss J Palaeontol. DOI 10.1007/s13358-015-0087-9.

Lamer, K., and P. Kollias (2015), Observations of fair-weather cumuli over land: Dynamical factors controlling cloud size and cover, Geophys. Res. Lett., 42, 8693–8701, doi:10.1002/2015GL064534

Lipton D., Lew D.K., Wallmo K., Wiley P.C., and Dvarskas A. (2015) The evolution of non-market valuation of U.S. Coastal and Marine Resources. Journal of Ocean and Coastal Economics. Article 6. Available at: http://cbe.miis.edu/joce/vol2014/iss1/6/.

Qian, Y., Feng, H., Gallagher, F. J., Zhu, Q., Wu, M., Liu, C.J., Jones, K.W., and Tappero, R.V. (2015). Synchrotron study of metal localozation in Typha latifolia L. root sections. Journal of Synchrotron Radiation. 22: 1459-1468.

Han J, McBean C, Wang L, Hoy J, Jaye C, Liu H, Li Z-Q, Sfeir M, Fischer D, Taylor G, Misewich J, Wong SS. 2015. Probing structure-induced optical behavior in a new class of self-activated luminescent 0D/1D CaWO4 metal oxide – CdSe nanocrystal composite heterostructures. Chem Materials 27: 778−792.

McParland, E, Benitez-Nelson CR, Taylor GT, Rollings A, Lorenzoni L. 2015. Cycling of suspended particulate phosphorus across the redoxcline of the Cariaco Basin. Mar. Chem. 176: 64-74.

Thorne, L. H., Hazen, E. L., Bograd, S. J., Foley, D. G., Conners, M. G., Kappes, M. A., … & Shaffer, S. A. (2015). Foraging behavior links climate variability and reproduction in North Pacific albatrosses. Movement Ecology, 3(1), 1-15.

Wehrmann, L.M., Titschack, J., Böttcher, M.E., and Ferdelman, T.G., 2015. Linking sedimentary sulfur and iron biogeochemistry to growth patterns of a cold-water coral mound in the Porcupine Basin, S.W. Ireland (IODP Expedition 307). Geobiology 13, 424-442.

Zhou, L., Zhang, M., Bao, Q., & Liu, Y. (2015). On the incident solar radiation in CMIP5 models. Geophysical Research Letters, 42(6), 1930-1935.

Tang, S., & Zhang, M. (2015). Three‐dimensional constrained variational analysis: Approach and application to analysis of atmospheric diabatic heating and derivative fields during an ARM SGP intensive observational period. Journal of Geophysical Research: Atmospheres.

Zhou, X-H, D-P. Wang, and D. Chen, 2015a. Global wavenumber spectrum with corrections for altimeter high-frequency noise. J. Phys. Oceanogr., 45(2), 495-503.

Xu, N., Tang, Y. Z., Qin, J., Duan, S., & Gobler, C. J. (2015). Ability of the marine diatoms Pseudo-nitzschia multiseries and P. pungens to inhibit the growth of co-occurring phytoplankton via allelopathy. Aquat Microb Ecol, 74, 29-41.

Park, B. S., Kim, J. H., Kim, J. H., Gobler, C. J., Baek, S. H., & Han, M. S. (2015). Dynamics of bacterial community structure during blooms of Cochlodinium polykrikoides (Gymnodiniales, Dinophyceae) in Korean coastal waters. Harmful Algae, 48, 44-54.

Hodell, D., Lorens., L., Crowhurst, S., Konijnendijk, T., Tjallingii, R., Jimenez-Espejo, F., Skinner, L., Tzedakis, P.C. and Shackelton Site Project Members (includes Flood, R.D.), 2015. A reference time scale for Site U1385 (Shackleton Site) on the SW Iberian Margin. Global and Planetary Change, 133, 49-64.

Goff, J.A., Flood, R.D., Austin., J.A., Jr., Schwab, W.C., Christensen, B., Browne, C.M., Denny, J.F. and Baldwin, W.E., 2015. The Impact of Hurricane Sandy on the Shoreface and Inner Shelf of Fire Island, New York: Large Bedform Migration and Limited Erosion. Continental Shelf Research, 98, 13-25.

Fritts, D. C., L. Wang, M. A. Geller, D. A. Lawrence, J. Werne, B. B. Balsley (2015), Numerical Modeling of Multi-Scale Dynamics at a High Reynolds Number: Instabilities, Turbulence, and an Assessment of Ozmidov and Thorpe Scales. J. Atmos. Sci., doi: http://dx.doi.org/10.1175/JAS-D-14-0343.1

Chennu, A., Volkenborn, N., de Beer, D., Wethey, D. S., Woodin, S. A., & Polerecky, L. (2015). Effects of Bioadvection by Arenicola marina on Microphytobenthos in Permeable Sediments. PLOS ONE, 10(7), e0134236.

Becker, K. N., & Warren, J. D. (2015). Material properties of Pacific hake, Humboldt squid, and two species of myctophids in the California Current. The Journal of the Acoustical Society of America, 137(5), 2522-2532.

Rountos, K. J., Frisk, M. G., & Pikitch, E. K. (2015) Are We Catching What They Eat? Moving Beyond Trends in the Mean Trophic Level of Catch. Fisheries, 40(8): 376-385.

Chow, J.S., C. Lee, A. Engel (2015). The influence of extracellular polysaccharides, growth rate, and free coccoliths on the coagulation efficiency of Emiliania huxleyi. Marine Chemistry, 175: 5-17, doi.org/10.1016/j.marchem.2015.04.010.

Cisternas Novoa, C., C. Lee, A. Engel (2015). Transparent exopolymer particles (TEP) and Coomassie stainable particles (CSP): Differences between their origin and vertical distributions in the ocean. Marine Chemistry, 175: 56-71, doi.org/10.1016/j.marchem.2015.03.009.

Slade, J. H., Thalman, R., Wang, J., & Knopf, D. A. (2015). Chemical aging of single and multicomponent biomass burning aerosol surrogate particles by OH: implications for cloud condensation nucleus activity. Atmos. Chem. Phys., 15, 10183–10201.

Hattenrath‐Lehmann, T., & Gobler, C. J. (2015). The contribution of inorganic and organic nutrients to the growth of a North American isolate of the mixotrophic dinoflagellate, Dinophysis acuminata. Limnology and Oceanography, 60(5), 1588-1603.

Baumann, H., Wallace, R.B., Tagliaferri, T., and Gobler, C.J. (2015). Large natural pH, CO2 and O2 fluctuations in a temperate tidal saltmarsh on diel, seasonal, and interannual time scales. Estuaries &Coasts. 38(1), 220-231. http://dx.doi.org/10.1007/s12237-014-9800-y

Tang, Y. Z., & Gobler, C. J. (2015). Sexual resting cyst production by the dinoflagellate Akashiwo sanguinea: a potential mechanism contributing toward the ubiquitous distribution of a harmful alga. Journal of Phycology.

DePasquale, E., Baumann, H., & Gobler, C. J. (2015). Vulnerability of early life stage Northwest Atlantic forage fish to ocean acidification and low oxygen. Marine Ecology Progress Series, 523, 145-156.

Malvezzi, A. J., Murray, C. S., Feldheim, K. A., DiBattista, J. D., Garant, D., Gobler, C. J., Chapman, D. D. … & Baumann, H. (2015). A quantitative genetic approach to assess the evolutionary potential of a coastal marine fish to ocean acidification.Evolutionary applications.

McElroy, A.E., Hice, L.A., Frisk, M.G., Purcell, S.L., Phillips, N.C., Fast, M.D. (2015) Spatial patterns in markers of contaminant exposure, glucose and glycogen metabolism, and immunological response in juvenile winter flounder (Pseudoplueronectes americanus). Comparative Biochemistry and Physiology D-Genomics & Proteomics 14, 53-65.

Cardinaud M, Dheilly NM, Huchette S, Moraga D, Paillard C. (2015). The early stages of the immune response of the European abalone Haliotis tuberculata to a Vibrio harveyi infection. Journal of Developmental and Comparative Immunology 51(2): 287-297 http://www.sciencedirect.com/science/article/pii/S0145305X15000427

Dheilly, N. M., Poulin, R., & Thomas, F. (2015). Biological warfare: Microorganisms as drivers of host–parasite interactions. Infection, Genetics and Evolution. DOI: 10.1016/j.meegid.2015.05.027 http://www.sciencedirect.com/science/article/pii/S1567134815001896

Zhang, Minghua (2015). Sea-level rise in New York in the 21st Century: Projection and methodology. New York State Resilience Institute for Storms and Emergencies (NYS RISE), NYS RISE Technical Report TR-0-15-01, 29 pp (available at http://nysrise.org/news/reports/).

Tang, S., & Zhang, M. (2015). Three‐dimensional constrained variational analysis: Approach and application to analysis of atmospheric diabatic heating and derivative fields during an ARM SGP intensive observational period. Journal of Geophysical Research: Atmospheres, 120(15), 7283-7299.

Xie, X., & Zhang, M. (2015). Scale‐aware parameterization of liquid cloud inhomogeneity and its impact on simulated climate in CESM. Journal of Geophysical Research: Atmospheres, 120(16), 8359-8371.

Wang, X., & Zhang, M. (2015). The coupling of mixed Rossby‐gravity waves with diabatic heating during the TRMM‐KWAJEX field campaign. Geophysical Research Letters, 42(19), 8241-8249.

Wolfe, C.L., and P. Cessi, 2015: Multiple regimes and low-frequency variability in the quasi-adiabatic overturning circulation. Journal of Physical Oceanography, 45 (6), 1690–1708. http://journals.ametsoc.org/doi/abs/10.1175/JPO-D-14-0095.1

Pikitch, E. K. (2015) Stop-loss order for forage fish fisheries. Proceedings of the National Academy of Sciences, 201505403.

DA Knopf, U Pöschl, M Shiraiwa (2015). Radial Diffusion and Penetration of Gas Molecules and Aerosol Particles through Laminar Flow Reactors, Denuders, and Sampling Tubes. Analytical chemistry 87 (7), 3746-3754.

Forrester, S. M., & Knopf, D. A. (2015). Corrigendum to “Photosensitised heterogeneous oxidation kinetics of biomass burning aerosol surrogates by ozone using an irradiated rectangular channel flow reactor”. Atmospheric Chemistry and Physics 15 (8), 4043-4043

Lee, J. M., & Khairoutdinov, M. (2015). A Simplified Land Model (SLM) for use in cloud‐resolving models: Formulation and evaluation. Journal of Advances in Modeling Earth Systems, 7(3), 1368-1392.

Bretherton, C.S., and M. Khairoutdinov, (2015). Convective self-aggregation feedbacks in near-global cloud-resolving simulations of an aquaplanet. J. Adv. Model. Earth Syst., DOI: 10.1002/2015MS000499

Childers, K. H., Flagg, C. N., Rossby, T. & Schrum, C, (2015). Directly measured currents and estimated transport pathways of Atlantic Water between 59.58N and the Iceland Faroes Scotland Ridge. Tellus A 2015, 67, 28067, http://dx.doi.org/10.3402/tellusa.v67.28067

Baumann, Z., N.S. Fisher, C.J. Gobler, K.O. Buesseler, J.A. George, S.M. Pike, and C.F. Breier. 2015. Fukushima 137Cs at the base of planktonic food webs off Japan. Deep-Sea Research Part I 106: 9-16.

Baumann, H., R.J.D. Wells, J.R. Rooker, Z.A. Baumann, D.J. Madigan, H. Dewar, O.E. Snodgrass, and N.S. Fisher. 2015. Combining otolith microstructure and trace elemental analyses to infer the arrival of Pacific bluefin tuna juveniles in the California Current Ecosystem. ICES Journal of Marine Science 72: 2128-2138.

Fisher, N.S., S.W. Fowler, and D.J. Madigan. 2015. Perspectives and reflections on the public reaction to recent Fukushima-related radionuclide studies, and a call for enhanced training in environmental radioactivity. Environmental Toxicology and Chemistry 34: 707-709.

Duffy, T. A., Hice, L. A., & Conover, D. O. 2015. Pattern and scale of geographic variation in environmental sex determination in the Atlantic silverside, Menidia menidia. Evolution, 69(8): 2187-2195.

Dunton, K. J., Jordaan, A., Conover, D. O., McKown, K. A., Bonacci, L. A., & Frisk, M. G. 2015. Marine Distribution and Habitat Use of Atlantic Sturgeon in New York Lead to Fisheries Interactions and Bycatch. Marine and Coastal Fisheries, 7(1): 18-32.

Conover, D. O., and D. A. Bronk. 2015. A transformational path forward for the ocean sciences community. Eos 96 (7): 10-11.

Roberts, K.J., B.A. Colle, N. Georgas, and S.B. Munch, 2015: A regression-based approach for cool-season storm surge predictions along the New York/New York Coast. J. Appl. Meteor. and Clim., 54, 1773-1791.

Lombardo, K., B. A. Colle, and Z. Zhang, 2015: Evaluation of Historical and Future Cool Season Precipitation over the Eastern United States and Western Atlantic Storm Track Using CMIP5 Models. J. Climate, 28, 451–467. doi: http://dx.doi.org/10.1175/JCLI-D-14-00343.1

Reed, K. A., B. Medeiros, J. T. Bacmeister, and P. H. Lauritzen (2015), Global radiative-convective equilibrium in the Community Atmosphere Model, version 5, J. Atmos. Sci., 72, 2183-2197, doi: 10.1175/JAS-D-14-0268.1.

Wehner, M. F., Prabhat, K. A. Reed, D. Stone, W. D. Collins, and J. T. Bacmeister (2015), Resolution dependence of future tropical cyclone projections of CAM5.1 in the US CLIVAR Hurricane Working Group idealized configurations, J. Climate, 28, 3905-3925, doi: 10.1175/JCLI-D-14-00311.1.

Reed, K. A., J. T. Bacmeister, N. A. Rosenbloom, M. F. Wehner, S. C. Bates, P. H. Lauritzen, J. E. Truesdale, and C. Hannay (2015), Impact of the dynamical core on the direct simulation of tropical cyclones in a high-resolution global model, Geophys. Res. Lett., 42, 3603-3608, doi: 10.1002/2015GL063974.

Walsh, Kevin J. E., S. Camargo, G. Vecchi, A. S. Daloz, J. Elsner, K. Emanuel, M. Horn, Y.-K. Lim, M. Roberts, C. Patricola, E. Scoccimarro, A. Sobel, S. Strazzo, G. Villarini, M. Wehner, M. Zhao, J. Kossin, T. LaRow, K. Oouchi, S. Schubert, H. Wang, J. Bacmeister, P, Chang, F. Chauvin, C. Jablonowski, A. Kumar, H. Murakami, T. Ose, K. A. Reed, R Saravanan, Y. Yamada, C. M. Zarzycki, P.-L. Vidale, J. A. Jonas and N. Henderson (2015), Hurricanes and climate: the U.S. CLIVAR working group on hurricanes, Bull. Amer. Meteor. Soc., 96, 997-1017, doi: 10.1175/BAMS-D-13-00242.1.

Reed, K.A. and D. R. Chavas (2015), Uniformly rotating global radiative-convective equilibrium in the Community Atmosphere Model, version 5, J. Adv. Model. Earth Syst., 7, doi: 10.1002/2015MS000519.

Ullrich, P. A., K. A. Reed, and C. Jablonowski (2015), Analytical initial conditions and an analysis of baroclinic instability waves in f- and β-plane 3D channel models, Quart. J. Roy. Met. Soc., in press, doi: 10.1002/qj.2583.

Yencho, M. A., Jordaan, A., Cerrato, R. M., Baumann, H., & Frisk, M. G. (2015). Growth and mortality in coastal populations of winter flounder: implications for recovery of a depleted population. Marine and Coastal Fisheries, 7(1): 246-259.

Gallagher, B. K., Hice, L. A., McElroy, A. E., Cerrato, R. M., & Frisk, M. G. (2015). Factors Influencing Daily Growth in Young-of-the-Year Winter Flounder along an Urban Gradient Revealed Using Hierarchical Linear Models. Marine and Coastal Fisheries, 7(1): 200-219.

Flanagan, A.M. and R.M. Cerrato. (2015). Testing the utility of the classic Folk (1954) grain size classes in quantitatively describing benthic community structure in soft-sediment, estuarine environments. Continental Shelf Research 109: 55-66.

Lara-Martín, P. A., Renfro, A., Cochran, K., & Brownawell, B. (2015). Geochronologies of pharmaceuticals in a sewage-impacted estuarine urban setting (Jamaica bay, NY). Environmental Science & Technology DOI: 10.1021/es506009v

Kang, Y., Koch, F., & Gobler, C. J. (2015). The interactive roles of nutrient loading and zooplankton grazing in facilitating the expansion of harmful algal blooms caused by the pelagophyte, Aureoumbra lagunensis, to the Indian River Lagoon, FL, USA. Harmful Algae, 49, 162-173.

Geller, M. A., Zhou, T., & Love, P. T. (2015), Tropical Gravity Wave Momentum Fluxes and Latent Heating Distributions. Journal of the Atmospheric Sciences, (2015).

Sagarese, S.R., M.G. Frisk, R.M. Cerrato, K.A. Sosebee, J.A. Musick, and P.J. Rago. (2015). Spatio-temporal overlap of spiny dogfish (Squalus acanthias) and commercial fisheries in the northeast US shelf large marine ecosystem. Fish. Bull. 113: 101-120.

Chang, E.K.M., C. Zheng, P. Lanigan, A.M.W. Yau, and J. D. Neelin, 2015: Significant modulation of variability and projected change in California winter precipitation by extratropical cyclone activity. Geophys. Res. Lett., 42, 5983-5991.

Taylor GT. 2015. Review of The Biology And Ecology Of Tintinnid Ciliates Models For Marine Plankton by J.R. Dolan, D.J.S. Montagnes, S. Agatha, D. W. Coats and D. K. Stoecker (Eds.), Wiley-Blackwell, Chichester, U.K. 2013, Quarterly Review of Biology, Univ. Chicago Press, pg. 314-315.

Liu, L., Lwiza, K. M., & Taylor, G. T. (2015). Importance of the bacterial dynamics in model simulations of seasonal hypoxia. Continental Shelf Research, 105, 1-17.

French, M. M., D. W. Burgess, E. R. Mansell, and L. J. Wicker, (2015). Bulk hook echo raindrop sizes retrieved using mobile, polarimetric Doppler radar observations. J. Appl. Meteor. Climatol., 54, 423–450. doi: 10.1175/JAMC-D-14-0171.1 http://journals.ametsoc.org/doi/abs/10.1175/JAMC-D-14-0171.1

French, M. M., Skinner, P. S., Wicker, L. J., & Bluestein, H. B. (2015). Documenting a Rare Tornado Merger Observed in the 24 May 2011 El Reno-Piedmont, Oklahoma, Supercell. Monthly Weather Review, (2015).

Colle, B. A., Bowman, M. J., Roberts, K. J., Bowman, M. H., Flagg, C. N., Kuang, J., … & Zhang, F. (2015). Exploring Water Level Sensitivity for Metropolitan New York during Sandy (2012) Using Ensemble Storm Surge Simulations. Journal of Marine Science and Engineering, 3(2), 428-443.

Young, C., Tamborski, J., & Bokuniewicz, H. (2015). Embayment scale assessment of submarine groundwater discharge nutrient loading and associated land use. Estuarine, Coastal and Shelf Science, 158, 20-30.

Rapaglia, J., Grant, C., Bokuniewicz, H., Pick, T., & Scholten, J. (2015). A GIS typology to locate sites of submarine groundwater discharge. Journal of environmental radioactivity, 145, 10-18.

Tamborski, J. J., Rogers, A. D., Bokuniewicz, H. J., Cochran, J. K., & Young, C. R. (2015). Identification and quantification of diffuse fresh submarine groundwater discharge via airborne thermal infrared remote sensing. Remote Sensing of Environment, 171, 202-217.

Rivera-Collazo, I., Winter, A., Scholz, D., Mangini, A., Miller, T., Kushnir, Y., & Black, D. (2015), Human adaptation strategies to abrupt climate change in Puerto Rico ca. 3.5 ka. The Holocene, 0959683614565951.

Winter, A., D. Zanchettin, T. Miller, Y. Kushnir, D. Black, G. Lohhmann, A. Burnett, G. H. Haug, J. Estrell-Martine, S. F. M. Breitenbach, L. Beaufort, A. Rubino, and H. Cheng (2015), Persistent drying in the tropics linked to natural forcing, Nature Communications, 6, doi:10.1038/ncomms8627.

Layer, M. and B. A. Colle, 2015: Climatology and Ensemble Predictions of Nonconvective High Wind Events in the New York City Metropolitan Region. Wea. Forecasting, 30, 270–294. doi: http://dx.doi.org/10.1175/WAF-D-14-00057.1

Ganetis, S. A., & Colle, B. A. 2015: The Thermodynamic and Microphysical Evolution of an Intense Snowband during the Northeast US Blizzard of 8–9 February 2013. Monthly Weather Review, 143(10), 4104-4125.

Colle, B.A., J.F. Booth, and E.K.M. Chang, 2015: A review of historical and future changes of extratropical cyclones and associated impacts along the U.S. east coast. Current Climate Change Reports, 1, 125-143.

Kim, H. M. E. K. Chang, M. Zhang, 2015: Statistical-dynamical seasonal forecast for tropical cyclones affecting New York State, Weather and Forecasting, 30, 295-307

Kim, H. M. and M. Alexander, 2015: ENSO’s modulation of water vapor transport over the Pacific North America region, J. Climate, 28, 3846-3856

Xu, H., Kim, H. M., Nye, J. A., & Hameed, S. (2015). Impacts of north Atlantic Oscillation on SEA surface temperature on the Northeast US continental shelf. Continental Shelf Research, 105, 60-66.

Leonardo, N., & Hameed, S. (2015). Impact of the Hawaiian High on Interannual Variations of Winter Precipitation over California. Journal of Climate, (2015).

J. Romanski and S. Hameed, (2015). The Impact of Trends in the Large Scale Atmospheric Circulation on Mediterranean Surface Turbulent Heat Fluxes, Advances in Meteorology, Article 519593

Signell, Richard P. and Henry J. Bokuniewicz (2015). Selected Papers from the 13th Estuarine and Coastal Modeling Conference, Printed Edition of the Special Issue Published in JMSE.

Rosa M, Ward JE, Ouvrard M, Holohan BA, Pales Espinosa E, Shumway SE, Allam B. (2015). Examining the physiological plasticity of particle capture by the blue mussel, Mytilus edulis (L.): Confounding factors and potential artifacts with studies utilizing natural seston. Journal of Experimental Marine Biology and Ecology 473: 207-217.

Rubin E, Pales Espinosa E, Koller A, Allam B. (2015). Characterization of the secretome of the clam parasite QPX. International Journal for Parasitology 45: 187-196.

Allam B, Pales Espinosa E. (2015). Mucosal immunity in mollusks. In: Mucosal Health in Aquaculture. Benjamin Beck and Eric Peatman (Eds). Academic Press. pp. 325-370. ISBN: 978-0-12-417186-2.

Bratton, S.D., B.A. Colle, and R.E. Wilson, 2015: Synoptic flow patterns and decadal variations of wind-induced mixing over western Long Island Sound. J. Geophys. Res.,120, DOI: 10.1002/2015JD023080.

Swanson, R. L., Bauer, C. L., Wilson, R. E., Rose, P. S., & O’Connell, C. (2015). Physical Processes Contributing to Localized, Seasonal Hypoxic Conditions in the Bottom Waters of Smithtown Bay, Long Island Sound, New York. Journal of Coastal Research, 32(1), 91-104.

Bokuniewicz, H., Cochran, J. K., Garcia-Orellana, J., Rodellas, V., Daniel, J. W., & Heilbrun, C. (2015). Intertidal percolation through beach sands as a source of 224,223 Ra to Long Island Sound, New York, and Connecticut, United States. Journal of Marine Research, 73(5), 123-140.

Beaupré S. R., Roberts M. L., Burton J. R. and Summons R. E. (2015) Rapid, high-resolution 14C chronology of ooids. Geochimica et Cosmochimica Acta 159, 126–138

Beaupré, S. R. (2015). Chemical oceanography: The ocean’s pressure cooker. Nature Geoscience.

Rose, P. S., Smith, J. P., Aller, R. C., Cochran, J. K., Swanson, R. L., & Coffin, R. B. (2015). Medically-derived I-131 as a tool for investigating the fate of wastewater nitrogen in aquatic environments. Environmental Science & Technology DOI: 10.102/acs.est.5600189

Walcker, R., Anthony, E. J., Cassou, C., Aller, R. C., Gardel, A., Proisy, C., … & Fromard, F. (2015). Fluctuations in the extent of mangroves driven by multi‐decadal changes in North Atlantic waves. Journal of Biogeography, 42(11), 2209-2219.

Alpert, P. A., Kilthau, W. P., Bothe, D. W., Radway, J. C., Aller, J. Y., & Knopf, D. A. (2015). The influence of marine microbial activities on aerosol production: A laboratory mesocosm study. Journal of Geophysical Research: Atmospheres, 120(17), 8841-8860.

Wilson, T. W., Ladino, L. A., Alpert, P. A., Breckels, M. N., Brooks, I. M., Browse, J., Burrows, S.M., Carslaw, K.S., Huffman, J.A., Judd, C., Kilthau, W.P., Mason, R.H., McFiggans, G., Miller, L.A., Nájera, J.J., Polishchuk, E., Rae, S., Schiller, C.L., Si, M., Temprado, J.V., Whale, T.F., Wong, J.P.S., Wurl, O., Yakobi-Hancock, J.D., Abbatt, J.P.D., Aller, J.Y., Bertram, A.K., Knopf, D.A., & Murray, B.J. (2015). A marine biogenic source of atmospheric ice-nucleating particles. Nature, 525(7568), 234-238.

Godelitsas, A., Price, R. E., Pichler, T., Amend, J., Gamaletsos, P., & Göttlicher, J. (2015). Amorphous As-sulfide precipitates from the shallow-water hydrothermal vents off Milos Island (Greece). Marine Chemistry, 177, 687-696.

Li, Z., Feng, S., Liu, Y., Lin, W., Zhang, M., Toto, T., … & Endo, S. (2015). Development of fine‐resolution analyses and expanded large‐scale forcing properties: 1. Methodology and evaluation. Journal of Geophysical Research: Atmospheres.

Taylor, D., & Wolverton, S. (Eds.). (2015). Sushi in Cortez: Interdisciplinary Essays on Mesa Verde.

Taylor, D., & Wolverton, S. (Eds.). (2015). Sushi in Cortez: Interdisciplinary Essays on Mesa Verde.

Safina, C. 2015. Beyond Words: What Animals Think and Feel. Henry Holt Co. New York.

Safina, C. 2015. Beyond Words: What Animals Think and Feel. Henry Holt Co. New York.

Wurster, Charles F. DDT Wars: Rescuing Our National Bird, Preventing Cancer, and Creating the Environmental Defense Fund. Oxford University Press, USA, 2015.

Wurster, Charles F. DDT Wars: Rescuing Our National Bird, Preventing Cancer, and Creating the Environmental Defense Fund. Oxford University Press, USA, 2015.

Hernández-Molina, F.-J., Stow, D.A.V., Alvarez-Zarikian, C.A., Acton, G., Bahr, A., Balestra, B., Ducassou, E., Flood, R., Flores, J-A., Furota, S., Grunert, P., Hodell, D., Jimenez-Espejo, F., Kim, J.K., Krissek, L., Kuroda, J., Li, B., Llave, E., Lofi, J., Lourens, L., Miller, M., Nanayama, F., Nishida, N., Richter, C., Roque, C., Pereira, H., Sanchez Goñi, M.F., Sierro, F.J., Singh, A.D., Sloss, C., Takashimizu, Y., Tzanova, A., Voelker, A., Williams, T.,and Xuan, C., 2013. Onset of Mediterranean Outflow into the North Atlantic, Science, 344 no. 6189 (13 June 2014) pp. 1244-1250

P. J. Keeling, F. Burki, H. M. Wilcox, B. Allam, E. E. Allen, L. A. Amaral-Zettler, E. V. Armbrust, J. M. Archibald, A. K. Bharti, C. J. Bell, B. Beszteri, K. D. Bidle, C. T. Cameron, L. Campbell, D. A. Caron, R. A. Cattolico, J. L. Collier, K. Coyne, S. K. Davy, P. Deschamps, S. T. Dyhrman, B. Edvardsen, R. D. Gates, C. J. Gobler, S. J. Greenwood, S. M. Guida, J. L. Jacobi, K. S. Jakobsen, E. R. James, B. Jenkins, U. John, M. D. Johnson, A. R. Juhl, A. Kamp, L. A. Katz, R. Kiene, A. Kudryavtsev, B. S. Leander, S. Lin, C. Lovejoy, D. Lynn, A. Marchetti, G. McManus, A. M. Nedelcu, S. Menden-Deuer, C. Miceli, T. Mock, M. Montresor, M. A. Moran, S. Murray, G. Nadathur, S. Nagai, P. B. Ngam, B. Palenik, J. Pawlowski, G. Petroni, G. Piganeau, M. C. Posewitz, K. Rengefors, G. Romano, M. E. Rumpho, T. Rynearson, K. B. Schilling, D. C. Schroeder,A. G. B. Simpson, C. H. Slamovits, D. R. Smith, G. J. Smith, S. R. Smith, H. M. Sosik, P. Stief, E. Theriot, S. N. Twary, P. E. Umale, D. Vaulot, B. Wawrik, G. L. Wheeler, W. H. Wilson, Y. Xu, A. Zingone, A. Z. Worden. 2014. The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing. PLoS Biology 12(6):e1001889. DOI: 10.1371/journal.pbio.1001889

Archer, C. L., B. A. Colle, L. Delle Monache, M. J. Dvorak, J. Lundquist, B. H. Bailey, P. Beaucage, M. J. Churchfield, A. C. Fitch, B. Kosovic, S. Lee, P. J. Moriarty, H. Simao, R. J. A. M. Stevens, D. Veron, J. Zackhttp, 2014: Meteorology for coastal/offshore wind energy in the United States: Recommendations and research needs for the next 10 years. Bull. Amer. Meteor. Soc., 95, 515-519.

Wei, N., Y. Dai, M. Zhang, L. Zhou, D. Ji, S. Zhu, and L. Wang (2014), Impact of precipitation‐induced sensible heat on the simulation of land‐surface air temperature, J. Adv. Model. Earth Syst., 06, doi:10.1002/2014MS000322.

Francesca Gherardi and Dianna K. Padilla 2014. Climate-induced changes in human behavior and range expansion of freshwater species. Ethology, Ecology and Evolution 26:86-90.

Aller, R.C., 2014, Sedimentary diagenesis, depositional environments, and benthic fluxes. IN: H. Holland and K. K. Turekian (eds), Treatise on Geochemistry, 2nd edition, v. 8, 293 – 334, Oxford: Elsevier.

Murray, C.M., Malvezzi, A., Gobler, C.J., and Baumann, H. (2014). Offspring sensitivity to ocean acidification changes seasonally in a coastal marine fish. Marine Ecology Progress Series http://dx.doi.org/10.3354/meps10791

Frischkorn, K. R., Harke, M. J., Gobler, C.J., & Dyhrman, S. T. (2014). De novo assembly of Aureococcus anophagefferens transcriptomes reveals diverse responses to the low nutrient and low light conditions present during blooms. Frontiers in microbiology, 5.

Koch, F., Kang, Y., Villareal, T. A., Anderson, D. M., & Gobler, C.J. (2014). Novel immunofluorescence flow cytometry technique detects the expansion of harmful brown tides caused by Aureoumbra lagunensis to the Caribbean Sea. Applied and Environmental Microbiology, AEM-00888.

Treible LM, Lonsdale DJ, Gobler CJ (2014). Role of the ctenophore Mnemiopsis leidyi in nutrient cycling in Long Island Sound, New York, USA. Mar Ecol Prog Ser 510:215-227

George, J. A., Lonsdale, D. J., Merlo, L. R., & Gobler, C. J. (2014). The interactive roles of temperature, nutrients, and zooplankton grazing in controlling the winter–spring phytoplankton bloom in a temperate, coastal ecosystem, Long Island Sound. Limnology and Oceanography.

Hattenrath‐Lehmann, T. K., Smith, J. L., Wallace, R. B., Merlo, L. R., Koch, F., Mittelsdorf, H., … & Gobler, C. J. (2014). The effects of elevated CO2 on the growth and toxicity of field populations and cultures of the saxitoxin‐producing dinoflagellate, Alexandrium fundyense. Limnology and Oceanography.

Wurch, L., Gobler CJ., Dhyrman S.D. (2014). Expression of a xanthine and phosphate transporter in cultures and field populations of the harmful alga Aureococcus anophagefferens: tracking nutritional physiology during brown tides. Environmental Microbiology, 16(8), 2444-2457. DOI: 10.1111/1462-2920.12374

Moniruzzaman M, LeCleir GR, Brown CM, Gobler CJ, Bidle KD, Wilson WH, Wilhelm SW. (2014). Genome of brown tide virus (AaV), the little giant of the Megaviridae, elucidates NCLDV genome expansion and host–virus coevolution. Journal of Virology. 466, 60-70 DOI: 10.1016/j.virol.2014.06.031

Hattenrath-Lehmann TK, Marcoval MA, Mittelsdorf H, Wang Z, Haynes B, Morton SL, Gobler CJ. (2014). Nitrogenous nutrients promote the growth and toxicity of Dinophysis acuminata during estuarine bloom events. PLOS ONE e0124148DOI: 10.1371/journal.pone.0124148

Xin, XG; Xue, W; Zhang, MH ; Li, HM; Zhang, T; Zhang, J. (2014). Simulation of SST variability in the North Pacific Ocean and ENSO by an interactive ensemble coupled model. CHINESE JOURNAL OF GEOPHYSICS-CHINESE EDITION, 57 Issue 4, 1021-1031 DOI: 10.6038/cjg20140401

Zhang, J., Xue, W., Zhang, M., Li, H., Zhang, T., Li, L., & Xin, X. (2014). Climate impacts of stochastic atmospheric perturbations on the ocean. International Journal of Climatology.

Xin, X., Xue, W., Zhang, M., Li, H., Zhang, T., & Zhang, J. (2014). How much of the NAO monthly variability is from ocean–atmospheric coupling: results from an interactive ensemble climate model. Climate Dynamics, 1-10.

Sandra E. Shumway, J. Evan Ward, Eric Heupel, Bridget A. Holohan, Johann Heupel, Tamara Heupel and Dianna K. Padilla 2014. Observations of feeding in the common Atlantic slippersnail Crepidula fornicata L., with special reference to the “mucus net”. Journal of Shellfish Research 33: 279-291.

Reyier, E.A., Franks, B.R., Chapman, D. D., Scheidt, D.M., Stolen, E.D., Gruber, S.H. (2014). Regional-scale migrations and habitat use of juvenile lemon sharks (Negaprion brevirostris) in the US South Atlantic. PLoS ONE 9 (2), e88470.

Kessel, S. T., Chapman, D. D., Franks, B. R., Gedamke, T., Gruber, S. H., Newman, J. M., … & Perkins, R. G. (2014). Predictable temperature-regulated residency, movement and migration in a large, highly mobile marine predator (Negaprion brevirostris). Marine Ecology Progress Series, 514, 175-190.

Peterson, B. J., A. M. Fournier, B. T. Furman and J. M. Carroll. 2014. Hemigrapsus sanguineus in Long Island salt marshes: experimental valuation of the interactions between an invasive crab and resident ecosystem engineers. PeerJ 2:e472 http://dx.doi.org/10.7717/peerj.472

Stubler, A. M., B. T. Furman and B. J. Peterson. 2014. Effects of pCO2 on the interaction between an excavating sponge, Cliona varians, and a hermatypic coral, Porites furcata. Marine Biology 161: 1851-1859.

Alexandra P. Hooks and Dianna K. Padilla 2014. Prey responses to the presence of a native and nonnative predator. Journal of Experimental Marine Biology and Ecology 461: 209-215.

Sarah M. Gray, Daniel E. Dykhuizen and Dianna K. Padilla 2014. The effects of species properties and community context on establishment success. Oikos 124: 355-363. doi: 10.1111/oik.01550

Daniel Grünbaum and Dianna K. Padilla 2014. An integrated modeling approach to assessing linkages between environment, organism, and phenotypic plasticity. 54: 323-335.

Dianna K. Padilla and Brian Tsukimura 2014. A new organismal systems biology: how animals walk the tightrope between stability and change. Integrative and Comparative Biology 54: 218-222.

Lynch, H.J., M. Rhainds, J. Calabrese, S. Cantrell, C. Cosner, and W.F. Fagan. 2014. How climate extremes – not means – define a species’ geographic range boundary via a demographic tipping point. Ecological Monographs 84: 131-149.

Zipkin, E.F., J.T. Thorson, K. See, H. J. Lynch, E.H.C. Grant, Y. Kanno, R.B. Chandler, B.H. Letcher, J.A. Royle. 2014. Modeling structured population dynamics using data from unmarked individuals. Ecology 95: 22-29.

LaRue, M.A., H. J. Lynch, P. Lyver, K. Barton, D.G. Ainley, A.M. Pollard, G. Ballard. 2014. Establishing a method to estimate Adelie penguin populations using remotely-sensed imagery. Polar Biology 37: 507-517.

Casanovas, P.V., H. J. Lynch, W.F. Fagan. 2014. Using citizen science to estimate lichen diversity. Biological Conservation 171: 1-8.

Lynch, H.J., and M.A. LaRue. 2014. First global survey of Adelie penguin populations. The Auk 131(4): 457-466.

Lynch, H.J., and M.R. Schwaller. 2014. Multi-sensor cross-validation of Adelie penguin detection and abundance estimation. PLoS ONE 9(11): e113301.

Lynch, H.J., J. Thorson, and O. Shelton. 2014. Dealing with under- and over-dispersed count data in life history, spatial, and community ecology. Ecology 95(11): 3173-3180.

Dianna K. Padilla, Michael McCann, Mica McCarty-Glenn, Alexandra Hooks, Sandra E. Shumway. 2014. Effect of food on time to metamorphic competence in the model system, Crepidula fornicata. Biological Bulletin. 227: 242-251.

Dianna K. Padilla, Thomas L. Daniel, Patsy S. Dickinson, Daniel Grünbaum, Cheryl Hayashi, Donal T. Manahan, James H. Marden, Billie J. Swalla and Brian Tsukimura. 2014. Addressing grand challenges in organismal biology – the need for synthesis. BioScience 64: 1178-1187.

Heather Tallis, et al including Padilla, Dianna K.. 2014. A call for inclusive conservation. Nature 515: 27-28.

Pikitch, E.K., Rountos, K.J., Essington, T.E., Santora, C., Pauly, D., Watson, R., Sumaila U.R., Boersma, P.D., Boyd, I.L., Conover, D.O., Cury, P., Heppell, S.S., Houde, E.D., Mangel, M., Plaganyi, E., Sainsbury, K., Steneck, R.S., Geers, T.M., Gownaris, N. and Munch, S.B. (2014) The global contribution of forage fish to marine fisheries and ecosystems. Fish and Fisheries 15(1): 43-64

Feldheim, K.A., Gruber, S.H., DiBattista, J.D., Babcock, E.A., Kessel, S.A., Hendry, A.P., Pikitch, E.K., Ashley, M.V.,Chapman, D. D. (2014). Two decades of genetic profiling yields first evidence of natal philopatry and long-term fidelity to parturition sites in sharks. Molecular Ecology 23 (1), 110-117.

Gilhooly, W. P., Fike, D. A., Druschel, G. K., Kafantaris, F. C., Price, R. E., & Amend, J. P. (2014). Sulfur and oxygen isotope insights into sulfur cycling in shallow-sea hydrothermal vents, Milos, Greece. Geochemical transactions, 15(1), 12.

Chowdhury, S.M., Dasugpta, S., McElroy A.E. and Sitharaman, B. 2014. Structural disruption increases toxicity of graphene nanoribbons. J. Appl. Toxicol. 34:1235-1246.

Dasgupta, S., Cao, A., Mauer, B., Yan, B., Uno, S., and McElroy, A. 2014. Genotoxicity of oxy-PAHs to Japanese medaka (Oryzias latipes) embryos using the comet assay. Environ. Sci. Poll. Res. 21:13867-13876.

Varekamp, J.C., McElroy, A.E., Mullaney, J.R. and Breslin, V.T. 2014. Metals, Organic Compounds, and Nutrients in Long Island Sound: Sources, Magnitudes, Trends, and Impacts, In: Long Island Sound: Prospects for the Urban Sea. Latimer JS, Tedesco MA, Swanson RL, Yarish C, Stacey P, Garza C (eds). Springer-Verlag, pp 203-284.

Kim. H. M., James Belanger, Eric Blake, Savin S. Chand, Prashant Goswami, Myong-In Lee, Kazuyoshi Oouchi, Jae-Kyung Schemm, Michael Ventrice, Bin Wang, Liguang Wu, 2014: Chapter 5.3: Beyond synoptic timescale /Intraseasonal timescales, Documentation, 8th International workshop on tropical cyclone, WMO.

Kim, D. M., M. I. Lee, H. M. Kim, S. D. Shubert and J. Yoo, 2014: The Modulation of Tropical Storm Activity in the Western North Pacific by the MJO in GEOS-5 AGCM Experiments, Atm. Sci. Lett, 15 (4), 335-341

Kang, D., M. I Lee, J. Im, D. Kim, H. M. Kim, H. S. Kang, S. D. Schubert, A. Arribas, and C. MacLachlan, 2014: Prediction of the Arctic Oscillation in Boreal Winter by Dynamical Seasonal Forecasting Systems. Geophys. Res. Lett., 41, 3577-3585

Kim, H. M., P. J. Webster, V. E. Toma, and D. Kim, 2014: Predictability and prediction skill of the MJO in two operational forecasting systems, J. Climate, 27 (14), 5364-5378.

Yu, J. 2014 Approximations of the dispersion relationship of water waves. J. Eng. Mech., 140(1): 233-235. doi:10.1061/(ASCE)EM.1943-7889.0000620

Yu, J. 2014 Fluid ratcheting by oscillating channel walls with sawteeth. J. Fluid Mech. 761: 305-328. doi:10.1017/jfm.2014.636

Bradley CJ, Madigan DJ, Block BA & BN Popp. 2014. Amino acid isotope incorporation and enrichment factors in Pacific bluefin tuna, Thunnus orientalis. PLoS ONE 9(1): e85818. DOI: 10.1371/journal.pone.0085818.

Scranton, M.I., G.T. Taylor, R. Thunell, C.R. Benitez-Nelson, F. Muller-Karger, K. Fanning, L. Lorenzoni, E. Montes, R. Varela, and Y. Astor. 2014. Interannual and subdecadal variability in the nutrient geochemistry of the Cariaco Basin. Oceanography 27(1), 148-159, http://dx.doi.org/10.5670/oceanog.2014.18.

Lynch PD, Nye JA, Hare JA, Stock CA, Alexander MA, Scott JD, Curti KL, Drew K (2014) Projected ocean warming poses a challenge to anadramous river herring populations. ICES Journal of Marine Science

Allen, B.J., and J.S. Levinton. 2014, Sexual selection and the physiological consequences of habitat choice by a fiddler crab. Oecologia 176: 25-34. DOI 10.1007/s00442-014-3002-y

Randall, D. A., DeMott, C., Stan, C., Khairoutdinov, M., Benedict, J., McCrary, R., … & Branson, M. (2014). Simulations of the tropical general circulation with a multiscale global model. Meteor. Monogr.

Tomichek, C., J. Colby, M.A. Adonizio, K.J Dunton, M.G. Frisk, D. Fox, and A. Jordaan (2014) Tagged species detection: approach to monitoring marine species at marine hydrokinetics projects. Proceedings of the 2nd Marine Energy Technology Symposium. Seattle, WA, 2014.

Dheilly NM, Adema C, Raftos DA, Gourbal B, Grunau C, Du Pasquier L. (2014). No more non-model species : the promise of Next Generation Sequencing for comparative immunology. Journal of Developmental and Comparative Immunology. 45(1): 56-66

Vidal-Dupiol J, Dheilly NM, Rondon R, Grunau C, Cosseau C, Smith K, Freitag M, Adjeroud M, Mitta G. (2014). Thermal Stress Triggers Broad Pocillopora damicornis Transcriptomic Remodeling, while Vibrio coralliilyticus Infection Induces a More Targeted Immuno-Suppression Response. Plos One 9(9): e107672

Dheilly NM, Jouaux A, Boudry P, Favrel P, Lelong C. (2014). Comparative transcriptomic profiling of gametogenesis of diploid and triploid Pacific oyster Crassostrea gigas: towards an understanding of partial sterility associated with triploidy. Plos One 9(11): e112094

Yu, J. (2014). Fluid ratcheting by oscillating channel walls with sawteeth. Journal of Fluid Mechanics, 761, 305-328.

Lopez, G. R., Carey, R., Carlton, J.T., Cerrato, R., Dam, H., DiGiovanni, R., Elphick, C., Frisk, M., Gobler, C., Hice, L., Howell, P., Jordaan, A., Lin, S., Liu, S., Lonsdale, D., McEnroe, M., McKown, K., McManus, G., Orson, R., Peterson, B., Pickerell, C., Rozsa, R., Shumway, S.E., Siuda, A., Streich, K., Talmage, S., Taylor, G., Thomas, E., Van Patten, M., Vaudrey, J., Wikfors, G., Yarish, C., and Zajac, R. 2014. Biology and Ecology of Long Island Sound. In Tedesco, M.A., Swanson, R.L., Yarish, C., Stacey, P.E., and Garza, C. (eds.), Long Island Sound: Prospects for the Urban Sea. Chapter 6, pp. 285-479. Springer.

McNamara, M. E., & Lonsdale, D. J. (2014). Interannual differences in microplankton drive changes in the feeding and fecundity of< i> Mnemiopsis leidyi in a Long Island estuary. Estuarine, Coastal and Shelf Science, 144, 1-7. Chicago

Kim, H. M., Y. G. Ham, A. A. Scaife, 2014: Improvement of initialized decadal predictions over the North Pacific Ocean by systematic anomaly pattern correction, J. Climate, 27 (13), 5148-5162.

Landman, N. H., R. H. Mapes, J. K. Cochran, V. Lignier , D. I. Hembree, C. Goiran, E. Folcher, and P. Brunet (2014) An unusual occurrence of Nautilus macromphalus in a cenote in the Loyalty Islands (New Caledonia). PLoS ONE 9(12), e113372. doi:10.1371/journal.pone.0113372.

Cuomo, C., J. K. Cochran, and K. K. Turekian (2014) Geochemistry of the Long Island Sound Estuary in: Long Island Sound, Springer Series on Environmental Management, Springer, New York, pp. 159-201.

Kruta, I., N. H. Landman, and J. K. Cochran (2014) A new approach for the determination of ammonite and nautilid habitats. PLoS ONE 9(1), e87479. doi:10.1371/journal.pone.0087479.

Chen, X., N.S. Fisher, and S.B. Baines. 2014. Influence of algal Fe content on the assimilation and fate of Fe and C in a marine copepod. Limnology and Oceanography 59: 129-140.

Qian, Y., Gallagher, F. J., Feng, H., Wu, M., & Zhu, Q. (2014). Vanadium uptake and translocation in dominant plant species on an urban coastal brownfield site. Science of The Total Environment, 476: 696-704.

Cao, Z., Zhu, Q., Aller, R. C., Aller, J. Y., & Waugh, S. (2014). Seasonal, 2-D sedimentary extracellular enzyme activities and controlling processes in Great Peconic Bay, Long Island. Journal of Marine Research, 71(6), 399-423.

Belkin, I.M., Hunt, G.L., Hazen, E.L., Zamon, J.E., Schick, R.S., Prieto, R., Brodziak, J., Teo, S.L. Thorne, L.H., Bailey, H., Sachihiko, I., Munk, P., Musyl, M.K., Willis, J.K., and W. Zhang (2014). Fronts, fish and predators. Deep-Sea Res. Pt. II. 107, 1-2.

Wehrmann, L.M. and Ferdelman, T.G., 2014. Biogeochemical consequences of the sedimentary subseafloor biosphere. In: Stein, R., Blackman, D., Inagaki, F., and Larsen, H.C. (Eds.), Earth and Life Processes Discovered from Subseafloor Environment – A Decade of Science Achieved by the Integrated Ocean Drilling Program (IODP). Developments in Marine Geology, 1st edition, Elservier, pp. 822.

Wehrmann, L.M., Formolo, M.J., Owens, J., Raiswell, R., Ferdelman, T.G., Riedinger, N. and Lyons, T.W., 2014. Iron and manganese speciation and cycling in glacially influenced high-latitude fjord sediments (West Spitsbergen, Svalbard): Evidence for a benthic recycling-transport mechanism. Geochimica Cosmochimica Acta 141, 628-655.

Ockert, C., Wehrmann, L.M., Kaufhold, S., Ferdelman, T.G., Teichert, B.M.A., and Gussone N., 2014. Calcium-ammonium exchange experiments on clay minerals using a 45Ca tracer technique in marine pore water. Isotopes in Environmental & Health Studies 50(1), 1-17.

Xie, S., Zhang, Y., Giangrande, S. E., Jensen, M. P., McCoy, R., & Zhang, M. (2014). Interactions between cumulus convection and its environment as revealed by the MC3E sounding array. Journal of Geophysical Research: Atmospheres, 119(20), 11-784.

Wang, X., & Zhang, M. (2014). Vertical velocity in shallow convection for different plume types. Journal of Advances in Modeling Earth Systems.

Suter EA, Lwiza KMM, Rose JM, Gobler C, Taylor GT (2014). Phytoplankton assemblage changes during decadal decreases in nitrogen loadings to the urbanized Long Island Sound estuary, USA. Mar Ecol Prog Ser 497, 51-67

Park, B. S., Wang, P., Kim, J. H., Kim, J. H., Gobler, C.J., & Han, M. S. (2014). Resolving the intra-specific succession within Cochlodinium polykrikoides populations in southern Korean coastal waters via use of quantitative PCR assays. Harmful Algae, 37, 133-141.

Tang, Y. Z., Kang, Y., Berry, D., & Gobler, C. J. (2014). The ability of the red macroalga, Porphyra purpurea (Rhodophyceae) to inhibit the proliferation of seven common harmful microalgae. Journal of Applied Phycology, 27(1), 531-544.

O’Leary, S.J., Dunton, K.J., King, T.L., Frisk, M.G., Chapman, D. D. (2014). Genetic diversity and effective number of breeders of Atlantic sturgeon, Acipenser oxyrhinchus oxyrhinchus. Conservation Genetics. DOI: 10.1007/s10592-014-0609-9

Nalluria D., Baumann Z., Abercrombie D.L., Chapman, D. D., Hammerschmidt, C.R., Fisher, N. (2014). Methylmercury in dried shark fins and shark fin soup from American restaurants. Science of the Total Environment 496, 644-648

K.N. Becker and J.D. Warren (2014). Material properties of Northeast Pacic zooplank-ton.” ICES Journal of Marine Science 71(9), 2550-2563. doi: 10.1093/icesjms/fsu109

Engel, A., C. Cisternas Novoa, M. Wurst, S. Endres, T. Tang, M. Schartau and C. Lee (2014). No detectable effect of CO2 on elemental stoichiometry of Emiliania huxleyi in nutrient-limited, acclimated continuous cultures. Marine Ecology Progress Series, 507: 15-30, doi.org/10.3354/meps10824.

Cisternas Novoa, C., C. Lee, A. Engel (2014). A semi-quantitative spectrophotometric, dye-binding assay for determination of Coomassie Blue stainable particles. Limnology and Oceanography: Methods 12(8): 604-616, doi.org/10.4319/lom.2014.12.604.

Tang, T., C. Lee, and K. Kisslinger (2014). Silicate deposition on decomposing cyanobacteria as a source of particulate silicate in the ocean. Nature Communications, 5: 4143, doi.org/10.1038/ncomms5143.

Wurch, L. L., Gobler, C.J., & Dyhrman, S. T. (2014). Expression of a xanthine permease and phosphate transporter in cultures and field populations of the harmful alga Aureococcus anophagefferens: tracking nutritional deficiency during brown tides. Environmental microbiology. Chicago

Keeling PJ, Burki F, Gobler CJ, and 65 others. (2014). The functional diversity of eukaryotic life in the oceans through transcriptome sequencing. PLOS Biology, 12 : e1001889, DOI: 10.1371/journal.pbio.1001889

Gobler CJ, Depasquale EL, Griffith AW, Baumann H. (2014). Hypoxia and acidification have additive and synergistic negative effects on the growth, survival, and metamorphosis of early life stage bivalves. PLoS ONE 9(1), e83648. doi:10.1371/journal.pone.0083648

Wallace, R. B., & Gobler, C. J. (2014). Factors Controlling Blooms of Microalgae and Macroalgae (Ulva rigida) in a Eutrophic, Urban Estuary: Jamaica Bay, NY, USA. Estuaries and Coasts, 1-15.

Gobler CJ, Talmage SC. (2014). Physiological response and resilience of early life stage Eastern oysters (Crassostrea virginica) to past, present, and future ocean acidification. Conservation Physiology, 2, 1-15

Dheilly NM (2014). Holobiont-holobiont interactions: redefining host-parasite interactions. Plos Path. 10(7): e1004093

Young, W. R., and C. L. Wolfe, 2014: Generation of ripples by shear-flow instability. Journal of Fluid Mechanics, 739, 276–307, doi: 10.1017/jfm.2013.617.

Wolfe, C. L., Cessi, P., 2014: Salt Feedback in the Adiabatic Overturning Circulation. J. Phys. Oceanogr., 44, 1175-1194. doi: http://dx.doi.org/10.1175/JPO-D-13-0154.1

Wolfe, C. L., 2014: Approximations to the ocean’s residual circulation in arbitrary tracer coordinates. Ocean Modelling, 75, 20–35, doi: 10.1016/j.ocemod.2013.12.004.

Knopf, D. A., Alpert, P. A., Wang, B., O’Brien, R. E., Kelly, S. T., Laskin, A., GIlles, M.K. & Moffet, R. C. (2014). Microspectroscopic imaging and characterization of individually identified ice nucleating particles from a case field study. Journal of Geophysical Research: Atmospheres, 119(17), 10-365.

JH Slade, DA Knopf (2014). Multiphase OH oxidation kinetics of organic aerosol: The role of particle phase state and relative humidity. Geophysical Research Letters 41 (14), 5297-5306.

Sanchez-Franks, A., C. N. Flagg, & T. Rossby, (2014). A comparison of transport and position between the Gulf Stream east of Cape Hatteras and the Florida Current, Journal of Marine Research, 72, 291–306.

Rossby, T., Flagg, C. N., Donohue, K., Sanchez-Franks, A., & Lillibridge, J. (2014). On the long-term stability of Gulf Stream transport based on 20 years of direct measurements. Geophysical Research Letters.

Childers, K. H., Flagg, C. N., & Rossby, T. (2014). Direct velocity observations of volume flux between Iceland and the Shetland Islands. Journal of Geophysical Research: Oceans, 119(9), 5934-5944.

D. Nalluri, Z. Baumann, D.L. Abercrombie, D.D. Chapman, C.R. Hammerschmidt, and N.S. Fisher. 2014. Methylmercury in dried shark fins and shark fin soup from American restaurants. Science of the Total Environment 496: 644-648.

Madigan, D.J., Z. Baumann, A.B. Carlisle, D.K. Hoen, B.N. Popp, H. Dewar, O.E. Snodgrass, B.A Block, and N.S. Fisher. 2014. Reconstructing transoceanic migration patterns of Pacific bluefin tuna using a chemical tracer toolbox. Ecology 95: 1674-1683.

Karimi, R., S. Silbernagel, N.S. Fisher, and J.R. Meliker. 2014. Elevated blood Hg at recommended seafood consumption rates in adult seafood consumers. International Journal of Hygiene and Environmental Health 217: 758-764.

Karimi, R., N.S. Fisher, and J.R. Meliker. 2014. Mercury-nutrient signatures in seafood and in the blood of avid seafood consumers. Science of the Total Environment 496: 636-643.

Dutton, J., and N.S. Fisher. 2014. Modeling metal bioaccumulation and tissue distribution in killifish (Fundulus heteroclitus) in three contaminated estuaries. Environmental Toxicology and Chemistry 33: 89-101.

Brown, E. E., Baumann, H., & Conover, D. O. 2014. Temperature and photoperiod effects on sex determination in a fish. Journal of Experimental Marine Biology and Ecology, 461: 39-43.

Maloney, E. D., Colle, B. C. and Coauthors, 2014: North American Climate in CMIP5 Experiments: Part III: Assessment of Twenty-First-Century Projections*. J. Climate, 27, 2230-2270. doi: http://dx.doi.org/10.1175/JCLI-D-13-00273.1.

Hodrefe, C, P. Doraiswamy, B. Colle, K. Demerjian, W. Hao, M. Erickson, M. Souders, and J-Y Ku, 2014: Meteorology, Emissions, and Grid Resolution: Effects on Discrete and Probabilistic Model Performance. In: D. Steyn, P. Builtjes, R. Timmermans (eds.): Air Pollution and Modeling and Its Application XXII, NARA Science for Peace and Security Series C: Environmental Security, 493-497. Springer Netherlands.

Wuebbles, D., Meehl, G., Hayhoe, K., Karl, T. R., Kunkel, K., Santer, B., Colle, B. C., … & Sun, L. 2014: CMIP5 climate model analyses: Climate extremes in the United States. Bulletin of the American Meteorological Society, 95(4), 571-583.

Colle, B. A., Stark, D. and Yuter, S.E. 2014: Surface Microphysical Observations within East Coast Winter Storms on Long Island, New York. Mon. Wea. Rev., 142, 3126-3146. doi: http://dx.doi.org/10.1175/MWR-D-14-00035.1

Wilson, R. E., Bratton, S. D., Wang, J., & Colle, B. A. 2014: Evidence for Directional Wind Response in Controlling Inter-annual Variations in Duration and Areal Extent of Summertime Hypoxia in Western Long Island Sound. Estuaries and Coasts, 1-9.

Picca, J.C., D.M. Schultz, B. A. Colle, S. Ganetis, D.R. Novak, and M. Sienkiewicz, 2014: The value of dual-polarization radar in diagnosing the complex microphysical evolution of an intense snowband. Bull. Meteor. Soc., 95, 1825-1834.

Li, H., and B.A. Colle, 2014: Multidecadal changes in the frequency and ambient conditions of warm season convective storms over the northeastern U.S. J. Climate, 27, 7285-7300.

Colle, B.A. 2014: Cold Air Damming. In: Gerald R. North (editor-in-chief), John Pyle and Fuqing Zhang (editors). Encyclopedia of Atmospheric Sciences, 2nd edition, Vol 4, pp. 62–68.

Rountos, K.J., Tang, Y.Z., Cerrato, R.M., Gobler, C.J., Pikitch, E.K. (2014). Toxicity of the harmful dinoflagellate Cochlodinium polykrikoides to early life stages of three estuarine forage fish. Mar Ecol Prog Ser 505: 81-94

McCauley, M. M., Cerrato, R. M., Sclafani, M., & Frisk, M. G. (2014). Diel Behavior in White Perch Revealed using Acoustic Telemetry. Transactions of the American Fisheries Society, 143(5): 1330-1340.

McNamara, M.E., D.J. Lonsdale, and R.M. Cerrato (2014). Role of eutrophication in structuring planktonic communities in the presence of the ctenophore Mnemiopsis leidyi. Mar. Ecol. Prog. Ser. 510: 151-165

Collier, J.L., S.P. Fitzgerald, L.A. Hice, M.G. Frisk, and A.E. McElroy (2014) A New PCR-Based Method Shows That Blue Crabs (Callinectes sapidus (Rathbun)) Consume Winter Flounder (Pseudopleuronectes americanus (Walbaum)). Plos One 9.

Sagarese, S.R., M.G. Frisk, T.J. Miller, K.A. Sosebee, J.A. Musick, and P.J. Rago (2014) Influence of environmental, spatial, and ontogenetic variables on habitat selection and management of spiny dogfish in the Northeast (US) shelf large marine ecosystem. Canadian Journal of Fisheries and Aquatic Sciences 71(4), 567-580.

Skyler R. Sagarese, Michael G. Frisk, Robert M. Cerrato, Kathy A. Sosebee, John A. Musick, and Paul J. Rago (2014). Application of generalized additive models to examine ontogenetic and seasonal distributions of spiny dogfish (Squalus acanthias) in the Northeast (US) shelf large marine ecosystem. Can J. Fish. Aq. Sci. 71: 847-877.

Pycke, B. F., Roll, I. B., Brownawell, B. J., Kinney, C. A., Furlong, E. T., Kolpin, D. W., & Halden, R. U. (2014). Transformation Products and Human Metabolites of Triclocarban and Triclosan in Sewage Sludge Across the United States. Environmental science & technology, 48(14), 7881-7890.

Lara-Martín, P. A., González-Mazo, E., Petrovic, M., Barceló, D., & Brownawell, B. J. (2014). Occurrence, distribution and partitioning of nonionic surfactants and pharmaceuticals in the urbanized Long Island Sound Estuary (NY). Marine pollution bulletin.

Traverso-Soto, J. M., Brownawell, B. J., González-Mazo, E., & Lara-Martín, P. A. (2014). Partitioning of alcohol ethoxylates and polyethylene glycols in the marine environment: Field samplings vs laboratory experiments. Science of the Total Environment, 490, 671-678.

Yuan, W., Geller, M. A. and Love, P. T. (2014), ENSO influence on QBO modulations of the tropical tropopause. Q.J.R. Meteorol. Soc., 140: 1670-1676. doi: 10.1002/qj.2247

Frisk, M.G., Jordaan, A., Miller, T.J. (2014) Moving beyond the current paradigm in marine population connectivity: are adults the missing link? Fish and Fisheries 15, 242-254.

Sheffield, J., et al. (including E.K.M. Chang), 2014: Regional Climate Processes and Projections for North America: CMIP3/CMIP5 differences, attribution and outstanding issues. NOAA Technical Report OAR CPO-2. Available at http://docs.lib.noaa.gov/noaa_documents/OAR/CPO/TR_OAR_CPO/CPO-2.pdf.

Maloney, E.D., S.J. Camargo, E. Chang, et al., 2014: North American climate in CMIP5 experiments: Part III: Assessment of twenty-first-century projections, J. Climate, 27, 2230-2270, doi: 10.1175/JCLI-D-13-00273.1.

Feng, J., Liu, P., Chen, W., & Wang, X. (2014). Contrasting Madden–Julian Oscillation activity during various stages of EP and CP El Niños. Atmospheric Science Letters.

Liu, P. (2014). MJO structure associated with the higher-order CEOF modes. Climate Dynamics, 1-12.

Bluestein, Howard B., J. B. Houser, M. M. French, J. C. Snyder, G. D. Emmitt, I. PopStefanija, C. A. Baldi, and R. T. Bluth, (2014). Observations of the boundary layer near tornadoes and in supercells using a mobile, co-located, pulsed Doppler lidar and radar. J. Atmos. Oceanic Technol., 31, 302-325.

French, Michael M., H. B. Bluestein, I. PopStefanija, C. A. Baldi, and R. T. Bluth, (2014). Mobile, phased-array, Doppler radar observations of tornadoes at X band. Mon. Wea. Rev., 142, 1010-1036.

Skinner, Patrick S., C. C. Weiss, M. M. French, H. B. Bluestein, P. M. Markowski, and Y. P. Richardson, (2014). VORTEX2 observations of a low-level mesocyclone with multiple internal rear-flank downdraft momentum surges in the 18 May 2010 Dumas, Texas supercell. Mon. Wea. Rev., 142, 2935-2960.

Dietrich, D. E., Bowman, M. J., Korotenko, K. A., & Bowman, M. H. E. (2014). Oil Spill Risk Management: Modeling Gulf of Mexico Circulation and Oil Dispersal. John Wiley & Sons.

Garcia-Orellana, J., Cochran, J. K., Bokuniewicz, H., Daniel, J. W. R., Rodellas, V., & Heilbrun, C. (2014). Evaluation of 224Ra as a tracer for submarine groundwater discharge in Long Island Sound (NY). Geochimica et Cosmochimica Acta 114, 314-330.

Koch, F., Burson, A., Tang, Y. Z., Collier, J. L., Fisher, N. S., Sañudo-Wilhelmy, S., & Gobler, C. J. (2014). Alteration of plankton communities and biogeochemical cycles by harmful Cochlodinium polykrikoides (Dinophyceae) blooms. Harmful Algae, 33(0), 41-54. doi: http://dx.doi.org/10.1016/j.hal.2014.01.003

Souders, M. B., Colle, B. A., & Chang, E. K. 2014: The Climatology and Characteristics of Rossby Wave Packets Using a Feature-Based Tracking Technique. Monthly Weather Review, 142(10), 3528-3548.

Souders, M.B., B.A. Colle, and E.K.M. Chang, 2014: A description of an automated approach for feature-based tracking of Rossby wave packets. Mon. Wea. Rev., 142, 3505-3527, doi:10.1175/MWR-D-1300317.1.

Chang, E.K.M., 2014: Impacts of background field removal on CMIP5 projected changes in Pacific winter cyclone activity, J. Geophys. Res. Atmos., 119, 4626-4639, doi:10.1002/2013JD020746.

Xia, X.*, and E.K.M. Chang, 2014: Diabatic damping of zonal index variations, J. Atmos. Sci., 71, 3090-3105, doi:10.1175/JAS-D-13-0292.1.

Doherty, O. M., Riemer, N., & Hameed, S. (2014). Role of the convergence zone over West Africa in controlling Saharan mineral dust load and transport in the boreal summer. Tellus B, 66.

Wallace, R. B., Baumann, H., Grear, J. S., Aller, R. C., & Gobler, C. J. (2014). Coastal ocean acidification: The other eutrophication problem. Estuarine, Coastal and Shelf Science.

del Castillo C, Allam B. (2014). A comparative genomics analysis of the T3SS2α pathogenicity island of Vibrio parahaemolyticus. Journal of Shellfish Research 33(2): 550

Wang K, Pales Espinosa E, Allam B. (2014). Effect of “heat shock” treatments on QPX disease in the hard clam, Mercenaria mercenaria. Journal of Shellfish Research 33(2): 661.

Wang K, Del Castillo C, Pales Espinosa E, Allam B. (2014). Clam focal and systemic immune responses to QPX revealed by RNA-Seq technology. Journal of Shellfish Research 33(2): 661.

Rubin E, Pales Espinosa E, Koller A, Allam B. (2014). Extracellular proteins in quahog parasite unknown (QPX) mucoid secretion. Journal of Shellfish Research 33(2): 648.

Rubin E, Tanguy A, Pales Espinosa E, Allam B. (2014). Differential gene expression in quahog parasite unknown (QPX) in response to clam factors and transcriptomic profiling of five QPX isolates. Journal of Shellfish Research 33(2): 647-648.

Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, et al. (2014). The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. PLoS Biology, 12(6), e1001889.

Rosa M, Ward E, Shumway S, Wikfors G, Pales Espinosa E, Allam B. (2014). Examining seasonal shifts in retention efficiency and mucosal composition in the blue mussel Mytilus edulis. Journal of Shellfish Research 33(2): 647.

Allam B., Corre E, Pales Espinosa E. (2014). Pallial mucus of Crassostrea virginica regulates the expression of putative virulence genes of its pathogen Perkinsus marinus. Journal of Shellfish Research 33(2): 586.

Allam, B., Pales Espinosa, E., Tanguy, A., Jeffroy, F., Le Bris, C., Paillard, C. 2014. Transcriptional changes in manila clam (Ruditapes philippinarum) in response to brown ring disease. Fish and Shellfish immunology. 41, 2-11.

Rubin E, Tanguy A, Perrigault M, Pales Espinosa E, Allam B. (2014). Characterization of the transcriptome and temperature-induced differential gene expression of in quahog parasite unknown QPX, the thraustochytrid parasite of hard clams. BMC Genomics 15: 245.

Pales Espinosa E, Koller T, Allam B. (2014). Shotgun proteomic characterization of the pallial mucus of the oyster Crassostrea virginica. Journal of Shellfish Research 33(2): 640.

Dahl S, Barnes D, Allam B. (2014). QPX disease relationships with environmental parameters monitored over a decade in a Raritan Bay (NY) hard clam fishery. Journal of Shellfish Research 33(2): 599-600.

Pales Espinosa E., Allam B. (2014). Food quality and season affect the expression of the mucosal lectin MeML and food sorting abilities in the blue mussel Mytilus edulis. Journal of Shellfish Research 33(2): 639-640.

Pales Espinosa E., Corre E, Allam B. (2014). Pallial mucus of Crassostrea virginica regulates the expression of putative virulence genes of its pathogen Perkinsus marinus. International Journal for Parasitology 44: 305-317.

Beaupré, S. R. (2014). Chapter 6: The isotopic composition of marine DOC, in Biogeochemistry of Marine Dissolved Organic Carbon, 2nd Edition, edited by D. A. Hansell and C. A. Carlson, pp. 335-368, Academic Press, U.K.

Geers, T.M., E.K. Pikitch, M.G. Frisk (In Press-online February 5, 2014). An Original Model of the Northern Gulf of Mexico using Ecopath with Ecosim and its Implications for the Effects of Fishing on Ecosystem Structure and Maturity. Deep Sea Research Part II: Topical Studies in Oceanography.

Newman, E. T. Biography of a Hacienda: Work and Revolution in Rural Mexico. 2014 University of Arizona Press.

Newman, E. T. Biography of a Hacienda: Work and Revolution in Rural Mexico. 2014 University of Arizona Press.

Dietrich, D. E., Bowman, M. J., Korotenko, K. A., & Bowman, M. H. E. The 2010 Deep Water Horizon and 2002 Supertanker Prestige Accidents. Oil Spill Risk Management: Modeling Gulf of Mexico Circulation and Oil Dispersal, 1-8.

Dietrich, D. E., Bowman, M. J., Korotenko, K. A., & Bowman, M. H. E. The 2010 Deep Water Horizon and 2002 Supertanker Prestige Accidents. Oil Spill Risk Management: Modeling Gulf of Mexico Circulation and Oil Dispersal, 1-8.

Berg, L. K., J. D. Fast, J. C. Barnard, S. P. Burton, B. Cairns, D. Chand, J. M. Comstock, S. Dunagan, R. A. Ferrare, C. J. Flynn, J. W. Hair., C. A. Hostetler., J. Hubbe., R. Johnson, E. I. Kassianov, C. D. Kluzek, P. Kollias, K. Lamer, F. Mei, M. A. Miller, J. Michalsky, I. Ortega, R R. Rogers., P. B. Russell, J. Redemann, A. J. Sedlacek III, M. Segal-Rosenheimer, B. Schmid, J. E. Shilling, Y. Shinozuka, S. R. Springston, J. Tomlinson, M. Tyrrell, J. M. Wilson, R. Volkamer, A. Zelenyuk, and C. M. Berkowitz, (2013), The Two-Column Aerosol Project: Phase I Overview and Impact of Elevated Aerosol Layers on Aerosol Optical Depth, Accepted to the Journal of Geophysical Research

Taylor, D. (2013). The Log from the Sea of Cortez: A Poem Series. San Antonio, TX: Wings Press.

Taylor, D. (2013). The Log from the Sea of Cortez: A Poem Series. San Antonio, TX: Wings Press.

Archer, C. L., Colle, B. C., Monache, L., Dvorak, M. J., Lundquist, J., Bailey, B. H., … & Zack, J. 2013: Meteorology for coastal/offshore wind energy in the United States: recommendations and research needs for the next 10 years. Bulletin of the American Meteorological Society.

Okubo, A., & Levin, S. A. (2013). Diffusion and ecological problems: modern perspectives (Vol. 14). Springer Science & Business Media.

Okubo, A., & Levin, S. A. (2013). Diffusion and ecological problems: modern perspectives (Vol. 14). Springer Science & Business Media.

Aerts, J., Botzen, W., Bowman, M., Dircke, P. and Ward, P., 2013. Climate adaptation and flood risk in coastal cities. Routledge.

Aerts, J., Botzen, W., Bowman, M., Dircke, P. and Ward, P., 2013. Climate adaptation and flood risk in coastal cities. Routledge.

D. Hill, M.J. Bowman, and J.S. Khinda (eds.). 2012. Storm Surge Barriers to Protect New York City: Against the Deluge, Amer. Soc. Civil Eng., pp. 259.

D. Hill, M.J. Bowman, and J.S. Khinda (eds.). 2012. Storm Surge Barriers to Protect New York City: Against the Deluge, Amer. Soc. Civil Eng., pp. 259.

Safina, C. 2011. A Sea in Flames. Random House, Inc. New York.

Safina, C. 2011. A Sea in Flames. Random House, Inc. New York.

Safina, C. 2011. The View From Lazy Point. Henry Holt Co. New York.

Safina, C. 2011. The View From Lazy Point. Henry Holt Co. New York.

Safina, C. 2010. Nina Delmar and the Great Whale Rescue (Illustr. children’s book).

Safina, C. 2010. Nina Delmar and the Great Whale Rescue (Illustr. children’s book).

Aerts, J., D.C. Major, M.J. Bowman, P. Dierke, M.A. Marfai. 2009. Connecting Delta Cities. VU University Press, Amsterdam, pp. 91.

Aerts, J., D.C. Major, M.J. Bowman, P. Dierke, M.A. Marfai. 2009. Connecting Delta Cities. VU University Press, Amsterdam, pp. 91.

Taylor, D (2008) Praying Up the Sun. San Antonio, TX: Pecan Grove Press

Taylor, D (2008) Praying Up the Sun. San Antonio, TX: Pecan Grove Press

Taylor, D. (2006). Pride of Place: A Contemporary Anthology of Texas Nature Writing. University of North Texas Press.

Taylor, D. (2006). Pride of Place: A Contemporary Anthology of Texas Nature Writing. University of North Texas Press.

Safina, C. 2006. Voyage of the Turtle. Henry Holt Co. New York.

Safina, C. 2006. Voyage of the Turtle. Henry Holt Co. New York.

Safina, C. 2002. Eye of the Albatross. Henry Holt Co. New York.

Safina, C. 2002. Eye of the Albatross. Henry Holt Co. New York.

Hutner, H. Colonial Women: Race and Culture in Stuart Drama. New York: Oxford University Press, 2001.

Hutner, H. Colonial Women: Race and Culture in Stuart Drama. New York: Oxford University Press, 2001.

Taylor, D. (2000). The Lawson’s Fork: Headwaters to the Confluence. Spartanburg, SC: Hub City Writers Project, 2000.

Taylor, D. (2000). The Lawson’s Fork: Headwaters to the Confluence. Spartanburg, SC: Hub City Writers Project, 2000.

Safina, C. 1998. Song For The Blue Ocean. Henry Holt Co. New York.

Safina, C. 1998. Song For The Blue Ocean. Henry Holt Co. New York.

Hutner, H. Rereading Aphra Behn: History, Theory, and Criticism. Charlottesville: University Press of Virginia, 1993.

Hutner, H. Rereading Aphra Behn: History, Theory, and Criticism. Charlottesville: University Press of Virginia, 1993.

Schubel, J. R., Thomas M. Bell, and H. H. Carter. The Great South Bay. SUNY Press, 1991.

Schubel, J. R., Thomas M. Bell, and H. H. Carter. The Great South Bay. SUNY Press, 1991.

Bell, T.M., Schubel, J.R., Swanson, R.L., Berger, H., Beristain, M., Breslin, V., Brezner, J., Charnon, S., Cuomo, M.C., Epp, J. and Fisher, N., 1989. Floatable wastes and the region’s beaches: answers to some common questions.

Bell, T.M., Schubel, J.R., Swanson, R.L., Berger, H., Beristain, M., Breslin, V., Brezner, J., Charnon, S., Cuomo, M.C., Epp, J. and Fisher, N., 1989. Floatable wastes and the region’s beaches: answers to some common questions.

Neal, H. A., & Schubel, J. R. (1987). Solid waste management and the environment: The mounting garbage and trash crisis. Englewood Cliffs (NJ): Prentice-Hall.

Neal, H. A., & Schubel, J. R. (1987). Solid waste management and the environment: The mounting garbage and trash crisis. Englewood Cliffs (NJ): Prentice-Hall.

Peterson, W.T., 1986: “The effects of seasonal variations in stratification on plankton dynamics in Long Island Sound”, in Bowman, M.J., C.M. Yentsch and W.T. Peterson, 1986. “Tidal Mixing and Plankton Dynamics”, Lecture Notes on Coastal and Estuarine Studies #17, Springer Verlag, Berlin, pp. 502. ISBN 0-387-96346-4.

Peterson, W.T., 1986: “The effects of seasonal variations in stratification on plankton dynamics in Long Island Sound”, in Bowman, M.J., C.M. Yentsch and W.T. Peterson, 1986. “Tidal Mixing and Plankton Dynamics”, Lecture Notes on Coastal and Estuarine Studies #17, Springer Verlag, Berlin, pp. 502. ISBN 0-387-96346-4.

Schubel, J. R. (1986). The Life & Death of the Chesapeake Bay. University of Maryland Sea Grant.

Schubel, J. R. (1986). The Life & Death of the Chesapeake Bay. University of Maryland Sea Grant.

Schubel, J. R., Wise, W. M., Schoof, J., & Bokuniewicz, Henry J. 1979. Questions about dredging and dredged material disposal in Long Island Sound. Marine Sciences Research Center, Stony Brook University; Stony Brook, NY

Schubel, J. R., Wise, W. M., Schoof, J., & Bokuniewicz, Henry J. 1979. Questions about dredging and dredged material disposal in Long Island Sound. Marine Sciences Research Center, Stony Brook University; Stony Brook, NY

Schubel, J. R., & Wise, W. M. (1979). Questions about dredging and dredged material disposal in the Chesapeake Bay (No. NP-2901951). State Univ. of New York, Stony Brook (USA). Marine Sciences Research Center.

Schubel, J. R., & Wise, W. M. (1979). Questions about dredging and dredged material disposal in the Chesapeake Bay (No. NP-2901951). State Univ. of New York, Stony Brook (USA). Marine Sciences Research Center.

Weyl, P. K. (1970). Oceanography: an introduction to the marine environment.

Weyl, P. K. (1970). Oceanography: an introduction to the marine environment.

Kinsman, B. (1965). Wind waves: their generation and propagation on the ocean surface. Courier Corporation.

Kinsman, B. (1965). Wind waves: their generation and propagation on the ocean surface. Courier Corporation.

2016 Publications

by | Jan 1, 2016

Allam, Bassem Liu, Q., Collier, J. L., & Allam, B. (2016). Seasonality of QPX disease in the Raritan Bay (NY) wild hard clam (Mercenaria mercenaria) population. Aquaculture Research. Aller, Josie Aller, Robert Beaupré, Steven Soulet, G., Skinner, L. C., Beaupré, S....

2015 Publications

by | Jan 5, 2015

Allam, Bassem Wang, K., Espinosa, E. P., Tanguy, A., & Allam, B. (2015). Alterations of the immune transcriptome in resistant and susceptible hard clams (Mercenaria mercenaria) in response to Quahog Parasite Unknown (QPX) and temperature. Fish & Shellfish Immunology....

2014 Publications

by | Jan 10, 2014

Allam, Bassem Rubin, E., Espinosa, E. P., Koller, A., & Allam, B. (2014). Characterization of the secretome of the clam parasite, QPX. International Journal for Parasitology. Raghuvanshi, D. S., Kumari, K., Allam, B. K., & Singh, K. N. (2014). A convenient and green...

2013 Publications

by | Jan 10, 2013

Allam, Bassem Allam B. , Carden WE, Ward JE, Ralph G, Winnicki S, Pales Espinosa E. (2013). Early host-pathogen interactions in marine bivalves: Evidence that the alveolate parasite Perkinsus marinus infects through the oyster mantle during rejection of pseudofeces....

2012 Publications

by | Jan 10, 2012

Allam, Bassem Allam B. 2012. Development of strategies to mitigate QPX disease in the hard clam Mercenaria mercenaria. Journal of Shellfish Research 31(1): 207-207. Sokolowski, M.S., B.A. Allam, K.J. Dunton, M.A. Clark, E.B. Kurtz and M.D.Fast. 2012. Immunophysiology...

2011 Publications

by | Jan 10, 2011

Allam, Bassem Rosa, M.E., J.E. Ward, S.E. Shumway, G.H. Wikfors, B.A. Holohan, E. Pales-Espinosa and B. Allam. 2011. The role of particle surface properties on feeding selectivity by Eastern oysters, Crassostrea virginica, and blue mussels, Mytilus edulis. Journal of...

2010 Publications

by | Jan 10, 2010

Allam, Bassem Pales Espinosa, E., M. Perrigault and B. Allam. 2010. Identification and molecular characterization of a mucosal lectin (MeML) from Mytilus edulis and its potential role in particle capture. Comparative Biochemistry and Physiology 156: 495-501....

2009 Publications

by | Jan 10, 2009

Allam, Bassem Perrigault M., A. Tanguy and B. Allam. 2009. Indentification and quantification of differentially expressed genes in the hard clam, Mercenaria mercenaria, in response to quahog parasite unknown (QPX). BMC Genomics 10: 377. doi:10.1186/1471-2164-10-377...

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