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Publications

Peer-reviewed publications by SoMAS Faculty

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Stepanuk, J. E., Read, A. J., Baird, R. W., Webster, D. L., & Thorne, L. H. (2018). Spatiotemporal patterns of overlap between short-finned pilot whales and the US pelagic longline fishery in the Mid-Atlantic Bight: An assessment to inform the management of fisheries bycatch. Fisheries Research, 208, 309-320.

Frisk, M. G., Dolan, T. E., McElroy, A. E., Zacharias, J. P., Xu, H., & Hice, L. A. (2018). Assessing the drivers of the collapse of Winter Flounder: Implications for management and recovery. Journal of Sea Research, 141, 1-13.

Gownaris, N. J., Rountos, K. J., Kaufman, L., Kolding, J., Lwiza, K. M. M., & Pikitch, E. K. (2018). Water level fluctuations and the ecosystem functioning of lakes. Journal of Great Lakes Research.

Hameed, S., Wolfe, C. L., & Chi, L. (2018). Impact of the Atlantic Meridional Mode on Gulf Stream North Wall Position. Journal of Climate, (2018).

Armstrong, C. T., Erdner, D. L., McClelland, J. W., Sanderson, M. P., Anderson, D. M., Gobler, C. J., & Smith, J. L. (2018). Impact of nitrogen chemical form on the isotope signature and toxicity of a marine dinoflagellate. Marine Ecology Progress Series, 602, 63-76.

Ohnemus, D. C., Krause, J. W., Brzezinski, M. A., Collier, J. L., Baines, S. B., & Twining, B. S. (2018). The chemical form of silicon in marine Synechococcus. Marine Chemistry.

Rudd, J. W., Bodaly, R. A., Fisher, N. S., Kelly, C. A., Kopec, D., & Whipple, C. (2018). Fifty years after its discharge, methylation of legacy mercury trapped in the Penobscot Estuary sustains high mercury in biota. Science of The Total Environment, 642, 1340-1352.

Smith L.C., Dheilly, N.M., et al. (2018) Echinodermata: The Complex Immune System in Echinoderms. In: Cooper E. (eds) Advances in Comparative Immunology. Springer, Cham

Zhang, Z., & Colle, B. A. (2018). Impact of Dynamical Downscaling Two CMIP5 Models on the Historical and Future Changes in Winter Extratropical Cyclones Along the East Coast of North America. Journal of Climate, (2018).

Bokuniewicz, H., & Jang, S. G. (2018). Dredging Intensity: A Spatio-Temporal Indicator for Managing Marine Resources. Environmental management, 1-8.

Zhang, M., Mariotti, A., Lin, Z., Ramasmamy, V., Lamarque, J., Xie, Z., & Zhu, J. (2018). Coordination to Understand and Reduce Global Model Biases by US and Chinese Institutions. Bulletin of the American Meteorological Society, (2018).

Zheng, C., Kar-Man Chang, E., Kim, H. M., Zhang, M., & Wang, W. (2018). Impacts of the Madden–Julian Oscillation on Storm-Track Activity, Surface Air Temperature, and Precipitation over North America. Journal of Climate, 31(15), 6113-6134.

Thomas, D. M., Lee, C. S., & Fisher, N. S. (2018). Bioaccumulation and trophic transfer of 137 Cs in marine and freshwater plankton. Chemosphere.

Waller R.F., Cleves P.A., Rubio-Brotons M., Woods A., Bender S.J., Edgcomb V., Gann, E.R., Jones, A.C., Teytelman, L., von Dassow, P., Wilhelm, S.W., and Collier, J.L. (2018) Strength in numbers: Collaborative science for new experimental model systems. PLoS Biol 16(7): e2006333. https://doi.org/10.1371/journal.pbio.2006333

Chang, E. K. M. (2018). CMIP5 Projected Change in Northern Hemisphere Winter Cyclones with Associated Extreme Winds. Journal of Climate, (2018).

Young, C. S., Peterson, B. J., & Gobler, C. J. (2018). The Bloom-Forming Macroalgae, Ulva, Outcompetes the Seagrass, Zostera marina, Under High CO 2 Conditions. Estuaries and Coasts, 1-16.

He, B., Liu, P., Zhu, Y., & Hu, W. (2018). Prediction and predictability of Northern Hemisphere persistent maxima of 500-hPa geopotential height eddies in the GEFS. Climate Dynamics, 1-17.

Li, X., Doherty, A. C., Brownawell, B., & Lara-Martin, P. A. (2018). Distribution and diagenetic fate of synthetic surfactants and their metabolites in sewage-impacted estuarine sediments. Environmental Pollution.

Phillips, J. M., Bricelj, V. M., Mitch, M., Cerrato, R. M., MacQuarrie, S., & Connell, L. B. (2018). Biogeography of resistance to paralytic shellfish toxins in softshell clam, Mya arenaria (L.), populations along the Atlantic coast of North America. Aquatic Toxicology.

Liou, Y. C., Bluestein, H. B., French, M. M., & Wienhoff, Z. B. (2018). Single-Doppler velocity retrieval of the wind field in a tornadic supercell using mobile, phased-array, Doppler radar data. Journal of Atmospheric and Oceanic Technology, (2018).

Witts, J. D., Landman, N. H., Garb, M. P., Boas, C., Larina, E., Rovelli, R., … & Cochran, J. K. (2018). A fossiliferous spherule-rich bed at the Cretaceous–Paleogene (K–Pg) boundary in Mississippi, USA: Implications for the K–Pg mass extinction event in the Mississippi Embayment and Eastern Gulf Coastal Plain. Cretaceous Research.

Wirth, V., Riemer, M., Chang, E. K., & Martius, O. (2018). Rossby Wave Packets on the Midlatitude Waveguide—A Review. Monthly Weather Review, (2018).

Borges, A. V., Speeckaert, G., Champenois, W., Scranton, M. I., & Gypens, N. (2018). Productivity and temperature as drivers of seasonal and spatial variations of dissolved methane in the Southern Bight of the North Sea. Ecosystems, 21(4), 583-599.

Foley, C. M., Hart, T., & Lynch, H. J. (2018). King Penguin populations increase on South Georgia but explanations remain elusive. Polar Biology, 41(6), 1111-1122.

Chen, Y.S., Verlinde, J., Clothiaux, E.E., Ackerman, A.S., Fridlind, A.M., Chamecki, M., Kollias, P., Kirkpatrick, M.P., Chen, B.C., Yu, G. and Avramov, A., (2018). On the forward modeling of radar Doppler spectrum width from LES: Implications for model evaluation. Journal of Geophysical Research: Atmospheres.

Bassim, S., & Allam, B. (2018). SNP hot-spots in the clam parasite QPX. BMC genomics, 19(1), 486.

Hinrichs, C., Flagg, C.N. & Wilson, R.E. Estuaries and Coasts: Great South Bay After Sandy: Changes in Circulation and Flushing due to New Inlet (2018). https://doi.org/10.1007/s12237-018-0423-6

Pikitch, E. K. (2018). A tool for finding rare marine species. Science, 360(6394), 1180 LP-1182. 

Feng, H., Qian, Y., Cochran, J. K., Zhu, Q., Heilbrun, C., Li, L., … & Nazareski, E. (2018). Seasonal differences in trace element concentrations and distribution in Spartina alterniflora root tissue. Chemosphere, 204, 359-370.

Landman, N. H., Cochran, J. K., Slovacek, M., Larson, N. L., Garb, M. P., Brezina, J., & Witts, J. D. (2018). Isotope sclerochronology of ammonites (Baculites Compressus) from methane seep and non-seep sites in the Late Cretaceous Western Interior Seaway, USA: Implications for ammonite habitat and mode of life. American Journal of Science, 318(6), 603-639.

Tonjes, D. J., McElroy, A. E., Barnes-Pohjonen, R. K., Ninivaggi, D. V., Dawydiak, W., Greene, G. T., & Brownawell, B. J. (2018). Fate of methoprene in temperate salt marsh ditches following aerial applications. The Science of the total environment, 642, 394.

Madigan, D. J., Snodgrass, O. E., & Fisher, N. S. (2018). From migrants to mossbacks: tracer-and tag-inferred habitat shifts in the California yellowtail Seriola dorsalis. Marine Ecology Progress Series, 597, 221-230.

Finn, D. and Marshall, J.T. (2018) “Superstorm Sandy at Five: Lessons on Law as Catalyst and Obstacle to Long-Term Recovery Following Catastrophic Disasters.” Environmental Law Reporter News and Analysis. Vol 48. June, 2018. 10494-10519.

Cembella, A. D., Tillmann, U., Gobler, C. J., Morton, S. L., Tomas, C. R., Burkholder, J. M., … & Band‐Schmidt, C. J. (2018). Harmful Algal Species Fact Sheets. Harmful Algal Blooms: A Compendium Desk Reference, 561-638.

Lauritzen, P. H., Nair, R. D., Herrington, A. R., Callaghan, P., Goldhaber, S., Dennis, J. M., Reed, K.A., … & Ullrich, P. A. (2018). NCAR Release of CAM‐SE in CESM2. 0: A Reformulation of the Spectral Element Dynamical Core in Dry‐Mass Vertical Coordinates With Comprehensive Treatment of Condensates and Energy. Journal of Advances in Modeling Earth Systems, 10(7), 1537-1570.

Yang, F., Kollias, P., Shaw, R. A., & Vogelmann, A. M. (2018). Cloud droplet size distribution broadening during diffusional growth: ripening amplified by deactivation and reactivation. Atmospheric Chemistry and Physics, 18(10), 7313-7328.

Liu, P. (2018). MJO evolution and predictability disclosed by the RMM variant with balanced MJO variance in convection and zonal winds. Climate Dynamics, 1-15.

Kramer, B. J., Davis, T. W., Meyer, K. A., Rosen, B. H., Goleski, J. A., Dick, G. J., … & Gobler, C. J. (2018). Nitrogen limitation, toxin synthesis potential, and toxicity of cyanobacterial populations in Lake Okeechobee and the St. Lucie River Estuary, Florida, during the 2016 state of emergency event. PloS one, 13(5), e0196278.

Wirth, C., & Warren, J. D. Overlapping use of an artificial reef by humans and an apex predator (Tursiops truncatus) in the New York Bight. Marine Mammal Science.

Landman, N. H., Jicha, B. R., Cochran, J. K., Garb, M. P., Brophy, S. K., Larson, N. L., & Brezina, J. (2018). 40Ar/39Ar date of a bentonite associated with a methane seep deposit in the upper Campanian Baculites compressus Zone, Pierre Shale, South Dakota. Cretaceous Research.

Erickson, M. J., Colle, B. A., & Charney, J. J. (2018). Evaluation and Postprocessing of Ensemble Fire Weather Predictions over the Northeast United States. Journal of Applied Meteorology and Climatology, 57(5), 1135-1153.

Hardisty, D. S., Lyons, T. W., Riedinger, N., Isson, T. T., Owens, J. D., Aller, R. C., … & Masterson, A. L. (2018). An evaluation of sedimentary molybdenum and iron as proxies for pore fluid paleoredox conditions. American Journal of Science, 318(5), 527-556.

Schwaller, M. R., Lynch, H. J., Tarroux, A., & Prehn, B. (2018). A continent-wide search for Antarctic petrel breeding sites with satellite remote sensing. Remote Sensing of Environment, 210, 444-451.

Madigan, D.J., Li, M., Yin, R., Baumann, H., Snodgrass, O.E., Dewar, H., Krabbenhoft, D.P., Baumann, Z., Fisher, N.S., Balcom, P.H. and Sunderland, E.M., (2018). Mercury stable isotopes reveal influence of foraging depth on mercury concentrations and growth in Pacific bluefin tuna. Environmental science & technology.

Ray, R., Michaud, E., Aller, R. C., Vantrepotte, V., Gleixner, G., Walcker, R., … & Thouzeau, G. The sources and distribution of carbon (DOC, POC, DIC) in a mangrove dominated estuary (French Guiana, South America). Biogeochemistry, 1-25.

Youngflesh, C., Jenouvrier, S., Hinke, J. T., DuBois, L., St Leger, J., Trivelpiece, W. Z., … & Lynch, H. J. (2017). Rethinking ‘normal’: The role of stochasticity in the phenology of a synchronously breeding seabird. Journal of Animal Ecology.

Berdalet, E., Kudela, R., Banas, N. S., Bresnan, E., Burford, M. A., Davidson, K., Gobler, C.J. … & Montresor, M. (2018). GlobalHAB: fostering international coordination on harmful algal bloom research in aquatic systems. Global ecology and oceanography of harmful algal blooms. Springer, Cham, 425-447.

Blanton, B., Dresback, K., Colle, B., Kolar, R., Vergara, H., Hong, Y., … & Wachtendorf, T. (2018). An Integrated Scenario Ensemble-Based Framework for Hurricane Evacuation Modeling: Part 2-Hazard Modeling. Risk analysis: an official publication of the Society for Risk Analysis.

Arora, K., Goff, J. A., Wood, L. J., Flood, R. D., & Christensen, B. (2018). Analysis of hummocky bedforms offshore Fire Island, New York, generated by superstorm Sandy. Continental Shelf Research.

Hornstein, J., Espinosa, E. P., Cerrato, R. M., Lwiza, K. M., & Allam, B. (2018). The influence of temperature stress on the physiology of the Atlantic surfclam, Spisula solidissima. Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology.

Wang, J., Kim, H. M., Chang, E. K., & Son, S. W. Modulation of the MJO and North Pacific Storm Track Relationship by the QBO. Journal of Geophysical Research: Atmospheres.

Yang, F., Luke, E. P., Kollias, P., Kostinski, A. B., & Vogelmann, A. M. (2018). Scaling of drizzle virga depth with cloud thickness for marine stratocumulus clouds. Geophysical Research Letters.

Farhadzadeh, A., Arabi, M. G., & Bokuniewicz, H. (2018). Contribution of seiche to beach profile evolution in eastern Lake Erie. Shore & Beach, 86(2), 19.

Grosvenor, D. P., Sourdeval, O., Zuidema, P., Ackerman, A., Alexandrov, M. D., Bennartz, R., Kollias, P., et al. (2018). Remote sensing of droplet number concentration in warm clouds: A review of the current state of knowledge and perspectives. Reviews of Geophysics, 56, 409–453.

Chia, M. A., Jankowiak, J. G., Kramer, B. J., Goleski, J. A., Huang, I. S., Zimba, P. V., … & Gobler, C. J. (2018). Succession and toxicity of Microcystis and Anabaena (Dolichospermum) blooms are controlled by nutrient-dependent allelopathic interactions. Harmful Algae, 74, 67-77.

Liu, S., Goff, J. A., Flood, R. D., Christensen, B., & Austin Jr, J. A. (2018). Sorted bedforms off Western Long Island, New York, USA: Asymmetrical morphology and twelve‐year migration record. Sedimentology.

Zhu, J., Zeng, X., Zhang, M., Dai, Y., Ji, D., Li, F., … & Song, X. (2018). Evaluation of the New Dynamic Global Vegetation Model in CAS-ESM. Advances in Atmospheric Sciences, 35(6), 659-670.

Ramesh, K., Melzner, F., Griffith, A. W., Gobler, C. J., Rouger, C., Tasdemir, D., & Nehrke, G. (2018). In vivo characterization of bivalve larval shells: a confocal Raman microscopy study. Journal of The Royal Society Interface, 15(141), 20170723.

Lau, Y. T., Gambino, L., Santos, B., Espinosa, E. P., & Allam, B. (2018). Regulation of oyster (Crassostrea virginica) hemocyte motility by the intracellular parasite Perkinsus marinus: A possible mechanism for host infection. Fish & shellfish immunology, 78, 18-25.

Yu, H., & Zhang, M. (2018). Explaining the Year‐to‐Year Variability of the Eastern Pacific Intertropical Convergence Zone in the Boreal Spring. Journal of Geophysical Research: Atmospheres, 123(8), 3847-3856.

Yu, H., & Zhang, M. (2018). Explaining the Year‐to‐Year Variability of the Eastern Pacific Inter‐Tropical Convergence Zone (ITCZ) in the Boreal Spring. Journal of Geophysical Research: Atmospheres.

O’Leary, B. C., Ban, N. C., Fernandez, M., Friedlander, A. M., García-Borboroglu, P., Golbuu, Y., … Pikitch, E.K. & McCauley, D. J. (2018). Addressing Criticisms of Large-Scale Marine Protected Areas. BioScience.

Wirth, V., Riemer, M., Chang, E. K., & Martius, O. (2018). Rossby Wave Packets on the Midlatitude Waveguide—A Review. Monthly Weather Review, (2018).

Earle, S. A., Wright, D. J., Joye, S., Laffoley, D., Baxter, J., Safina, C., & Elkus, P. (2018). Ocean deoxygenation: Time for action. Science, 359(6383), 1475-1476.

Hartman, R., Espinosa, E. P., & Allam, B. (2018). Identification of clam plasma proteins that bind its pathogen Quahog Parasite Unknown. Fish & Shellfish Immunology, 77, 214-221.

Davidson, R. A., Nozick, L. K., Wachtendorf, T., Blanton, B., Colle, B., Kolar, R. L., … & Leonardo, N. (2018). An Integrated Scenario Ensemble‐Based Framework for Hurricane Evacuation Modeling: Part 1—Decision Support System. Risk analysis.

Zhang, D., Wang, Z., Kollias, P., Vogelmann, A. M., Yang, K., & Luo, T. (2018). Ice particle production in mid-level stratiform mixed-phase clouds observed with collocated A-Train measurements. Atmospheric Chemistry and Physics, 18(6), 4317-4327.

Erickson, M. J., Colle, B. A., & Charney, J. J. (2018). Evaluation and Post-Processing of Ensemble Fire Weather Predictions over the Northeast United States. Journal of Applied Meteorology and Climatology, (2018).

Gobler, C. J., Merlo, L. R., Morrell, B. K., & Griffith, A. W. (2018). Temperature, Acidification, and Food Supply Interact to Negatively Affect the Growth and Survival of the Forage Fish, Menidia beryllina (Inland Silverside), and Cyprinodon variegatus (Sheepshead Minnow). Frontiers in Marine Science, 5, 86.

Urmy, S. S., & Warren, J. D. (2018). Foraging hotspots of common and roseate terns: the influence of tidal currents, bathymetry, and prey density. Marine Ecology Progress Series, 590, 227-245.

Chi, L., Wolfe, C. L., & Hameed, S. (2018). Intercomparison of the Gulf Stream in ocean reanalyses: 1993− 2010. Ocean Modelling, 125, 1-21.

Wang, J., Kim, H.-M. & Chang, E. K. M. (2018). Interannual Modulation of Northern Hemisphere Winter Storm Tracks by the QBO. Geophysical Research Letters, 45. https://doi.org/10.1002/2017GL076929

Chi, L., Wolfe, C. L., & Hameed, S. (2018). Intercomparison of the Gulf Stream in Ocean Reanalyses: 1993− 2010. Ocean Modelling.

Lau, Y. T., Gambino, L., Santos, B., Espinosa, E. P., & Allam, B. (2018). Transepithelial migration of mucosal hemocytes in Crassostrea virginica and potential role in Perkinsus marinus pathogenesis. Journal of invertebrate pathology, 153, 122-129.

Wing, A. A., Reed, K. A., Satoh, M., Stevens, B., Bony, S., & Ohno, T. (2018). Radiative–convective equilibrium model intercomparison project. Geoscientific Model Development, 11(2), 793.

Oue, M., Kollias, P., Ryzhkov, A., & Luke, E. P. (2018). Toward Exploring the Synergy Between Cloud Radar Polarimetry and Doppler Spectral Analysis in Deep Cold Precipitating Systems in the Arctic. Journal of Geophysical Research: Atmospheres.

Gobler, C. J., Merlo, L. R., Morell, B. K., & Griffith, A. W. (2018). Temperature, acidification, and food supply interact to negatively affect the growth and survival of the forage fish, Menidia beryllina (inland silverside) and Cyprinodon variegatus (sheepshead minnow). Frontiers in Marine Science, 5, 86.

Wehner, M. F., Reed, K. A., Loring, B., Stone, D., & Krishnan, H. (2018). Changes in tropical cyclones under stabilized 1.5 and 2.0° C global warming scenarios as simulated by the Community Atmospheric Model under the HAPPI protocols. Earth System Dynamics, 9(1), 187.

Isaacman-VanWertz, G., Massoli, P., O’Brien, R., Lim, C., Franklin, J.P., Moss, J.A., Hunter, J.F., Nowak, J.B., Canagaratna, M.R., Misztal, P.K., Su, L., Knopf, D.A., and Arata, C.,  (2018). Chemical evolution of atmospheric organic carbon over multiple generations of oxidation. Nature Chemistry, p.1.

Dvarskas, A. (2018). Mapping ecosystem services supply chains for coastal Long Island communities: Implications for resilience planning. Ecosystem Services, 30, 14-26.

Shipley, O. N., Murchie, K. J., Frisk, M. G., O’Shea, O. R., Winchester, M. M., Brooks, E. J., … & Power, M. Trophic niche dynamics of three nearshore benthic predators in The Bahamas. Hydrobiologia, 1-12.

Madigan, D. J., Baumann, Z., Carlisle, A. B., Snodgrass, O., Dewar, H., & Fisher, N. S. (2018). Isotopic insights into migration patterns of Pacific bluefin tuna in the eastern Pacific Ocean. Canadian Journal of Fisheries and Aquatic Sciences, (999), 1-11.

Pochron, S., Nikakis, J., Illuzzi, K. et al. (2018). Exposure to aged crumb rubber reduces survival time during a stress test in earthworms (Eisenia fetida). Environ Sci Pollut Res (2018). https://doi.org/10.1007/s11356-018-1433-4

Espinosa, E. P., & Allam, B. (2018). Reverse genetics demonstrate the role of mucosal C-type lectins in food particle selection in the oyster Crassostrea virginica. Journal of Experimental Biology, jeb-174094.

Herrington, A. R., & Reed, K. A. (2018). An Idealized Test of the Response of the Community Atmosphere Model to Near‐Grid‐Scale Forcing Across Hydrostatic Resolutions. Journal of Advances in Modeling Earth Systems, 10(2), 560-575.

Grzelak, K., Tamborski, J., Kotwicki, L., & Bokuniewicz, H. (2018). Ecostructuring of marine nematode communities by submarine groundwater discharge. Marine Environmental Research, 136, 106-119.

Schrimpf, M., Naveen, R., & Lynch, H. J. (2018). Population status of the Antarctic shag Phalacrocorax (atriceps) bransfieldensis. Antarctic Science, 1-9.

Lucca, B. M., & Warren, J. D. (2018). Acoustically Measured Distribution and Abundance of Atlantic Menhaden (Brevoortia tyrannus) in a Shallow Estuary in Long Island, NY. Estuaries and Coasts, 1-12.

Smirnov, O., Steinwand, M. C., Xiao, T., & Zhang, M. (2018). Climate Impacts, Political Institutions, and Leader Survival: Effects of Droughts and Flooding Precipitation. Economics of Disasters and Climate Change, 1-21.

Alexander, M. A., Scott, J. D., Friedland, K. D., Mills, K. E., Nye, J. A., Pershing, A. J., & Thomas, A. C. (2018). Projected sea surface temperatures over the 21st century: Changes in the mean, variability and extremes for large marine ecosystem regions of Northern Oceans. Elem Sci Anth, 6(1), 9. DOI: http://doi.org/10.1525/elementa.191

Dasgupta, S., Choyke, S., Ferguson, P. L., & McElroy, A. E. (2018). Antioxidant responses and oxidative stress in sheepshead minnow larvae exposed to Corexit 9500® or its component surfactant, DOSS. Aquatic Toxicology, 194, 10-17.

Zhang, Y., Xie, S., Klein, S. A., Marchand, R., Kollias, P., Clothiaux, E. E., … & Tang, S. (2018). The ARM Cloud Radar Simulator for Global Climate Models: A New Tool for Bridging Field Data and Climate Models. Bulletin of the American Meteorological Society, (2017).

Knopf, D. A., Alpert, P. A., Wang, B., The Role of Organic Aerosol in Atmospheric Ice Nucleation: A Review. ACS Earth Space Chem., Article ASAP DOI: 10.1021/acsearthspacechem.7b00120.

Hattenrath-Lehmann, T. K., Lusty, M. W., Wallace, R. B., Haynes, B., Wang, Z., Broadwater, M., … Chytalo, K. & Gobler, C. J. (2018). Evaluation of Rapid, Early Warning Approaches to Track Shellfish Toxins Associated with Dinophysis and Alexandrium Blooms. Marine Drugs, 16(1), 28.

Zhou, X., Ackerman, A. S., Fridlind, A. M., & Kollias, P. (2018). Simulation of mesoscale cellular convection in marine stratocumulus. Part I: Drizzling conditions. Journal of the Atmospheric Sciences, (2017).

Flanagan, A. M., Flood, R. D., Frisk, M. G., Garza, C. D., Lopez, G. R., Maher, N. P. & Cerrato, R. M. (2018). The relationship between observational scale and explained variance in benthic communities. PLoS ONE, 13(1), e0189313.

Chen, J., Liu, Y., Zhang, M., & Peng, Y. (2018). Height Dependency of Aerosol‐Cloud Interaction Regimes. Journal of Geophysical Research: Atmospheres, 123(1), 491-506.

Korfe, N. G., & Colle, B. A. (2018). Evaluation of Cool-Season Extratropical Cyclones in a Multimodel Ensemble for Eastern North America and the Western Atlantic Ocean. Weather and Forecasting, 33(1), 109-127.

Gurr, S. J., Goleski, J., Lima, F. P., Seabra, R., Gobler, C. J., & Volkenborn, N. (2018). Cardiac responses of the bay scallop Argopecten irradians to diel-cycling hypoxia. Journal of Experimental Marine Biology and Ecology, 500, 18-29.

Rémillard, J., Fridlind, A. M., Ackerman, A. S., Tselioudis, G., Kollias, P., Mechem, D. B., … & Chuang, P. Y. (2017). Use of cloud radar Doppler spectra to evaluate stratocumulus drizzle size distributions in large-eddy simulations with size-resolved microphysics. Journal of Applied Meteorology and Climatology, 56(12), 3263-3283.

Chen, J., Liu, Y., Zhang, M., & Peng, Y. (2017). Height Dependency of Aerosol‐Cloud Interaction Regimes. Journal of Geophysical Research: Atmospheres.

Snelgrove, P.V., Soetaert, K., Solan, M., Thrush, S., Wei, C.L., Danovaro, R., Fulweiler, R.W., Kitazato, H., Ingole, B., Norkko, A., Parkes, R.J. and Volkenborn, N., (2017). Global Carbon Cycling on a Heterogeneous Seafloor. Trends in ecology & evolution.

Suter EA, Pachiadaki MG, Taylor GT, Astor Y, Edgcomb VP. (2017) Free-living chemoautotrophic and particle-attached heterotrophic prokaryotes dominate microbial assemblages along a pelagic marine redox gradient. Environ Microbiol, doi:10.1111/1462-2920.13997.

Thorne, L. H., Foley, H. J., Baird, R. W., Webster, D. L., Swaim, Z. T., & Read, A. J. (2017). Movement and foraging behavior of short-finned pilot whales in the Mid-Atlantic Bight: importance of bathymetric features and implications for management. Marine Ecology Progress Series, 584, 245-257.

Berdalet, E., R. Kudela, E. Urban, H. Enevoldsen, N.S. Banas, E. Bresnan, M. Burford, K. Davidson, C.J. Gobler, B. Karlson, P.T. Lim, L. Mackenzie, M. Montresor, V.L. Trainer, G. Usup, and K. Yin. 2017. GlobalHAB: A new program to promote international research, observations, and modeling of harmful algal blooms in aquatic systems. Oceanography 30(1):70–81, https://doi.org/10.5670/oceanog.2017.111.

Tamborski, J. J., Cochran, J. K., Heilbrun, C., Rafferty, P., Fitzgerald, P., Zhu, Q., & Salazar, C. (2017). Investigation of pore water residence times and drainage velocities in salt marshes using short-lived radium isotopes. Marine Chemistry, 196, 107-115.

Ullrich, P. A., Jablonowski, C., Kent, J., Lauritzen, P. H., Nair, R., Reed, K. A., … & Konor, C. (2017). DCMIP2016: a review of non-hydrostatic dynamical core design and intercomparison of participating models. Geoscientific Model Development, 10(12), 4477.

Baumann, H., & Nye, J. (2017). Fatty acid profiles of M. menidia females and their unfertilized eggs.

Baumann, H., & Nye, J. (2017). Survival, length, and growth responses of M. menidia offspring from different females exposed to contrasting CO2 environments.

Riaz, S. M., Iqbal, M. J., & Hameed, S. (2017). Impact of the North Atlantic Oscillation on winter climate of Germany. Tellus A: Dynamic Meteorology and Oceanography, 69(1), 1406263.

Dasgupta, S., Choyke, S., Ferguson, P. L., & McElroy, A. E. (2018). Antioxidant responses and oxidative stress in sheepshead minnow larvae exposed to Corexit 9500® or its component surfactant, DOSS. Aquatic Toxicology, 194, 10-17.

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Thickman, J. D., & Gobler, C. J. (2017). The ability of algal organic matter and surface runoff to promote the abundance of pathogenic and non-pathogenic strains of Vibrio parahaemolyticus in Long Island Sound, USA. PloS one, 12(10), e0185994.

Bowman, M. J., Yaro, R., & Golden, W. B. Regional Storm Surge Planning for Metro New York/New Jersey. In International Conference on Sustainable Infrastructure 2017 (pp. 336-347).

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Young, C. S., & Gobler, C. J. (2017). The organizing effects of elevated CO2 on competition among estuarine primary producers. Scientific Reports, 7.

McCartain, L. D., Townsend, M., Thrush, S. F., Wethey, D. S., Woodin, S. A., Volkenborn, N., & Pilditch, C. A. (2017). The effects of thin mud deposits on the behaviour of a deposit-feeding tellinid bivalve: implications for ecosystem functioning. Marine and Freshwater Behaviour and Physiology, 50(4), 239-255.

Wehrmann, L.M., Riedinger, N., Brunner, B., Kamyshny Jr., A., Hubert, C.R.J., Herbert, L.C., Brüchert, V., Jørgensen, B.B., Ferdelman, T.G., Formolo M.J., 2017. Iron-controlled oxidative sulfur cycling recorded in the distribution and isotopic composition of sulfur species in glacially influenced fjord sediments of west Svalbard. Chemical Geology 466, 678-695.

Mao, X., Waugh, S., Langlois, K., Collier, J.L., Price, R., Garvey, J., Gobler, C. and Walker, H., 2017. Nitrogen transformations and microbial characterization in passive nitrogen removing biofilters (NRBs) for onsite wastewater treatment. Proceedings of the Water Environment Federation, 2017(15), pp.898-906.

Bond, M. E., Valentin-Albanese, J., Babcock, E. A., Abercrombie, D., Lamb, N. F., Miranda, A., Pikitch, E.K. & Chapman, D. D. (2017). Abundance and size structure of a reef shark population within a marine reserve has remained stable for more than a decade. Marine Ecology Progress Series, 576, 1-10.

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Li, Y., & Zhang, M. (2017). The Role of Shallow Convection over the Tibetan Plateau. Journal of Climate, 30(15), 5791-5803.

Hattenrath-Lehmann, T. K., & Gobler, C. J. (2017). Identification of unique microbiomes associated with harmful algal blooms caused by Alexandrium fundyense and Dinophysis acuminata. Harmful Algae, 68, 17-30.

Bond, M. E., Valentin-Albanese, J., Babcock, E. A., Abercrombie, D., Lamb, N. F., Miranda, A., Pikitch, E.K. & Chapman, D. D. (2017). Abundance and size structure of a reef shark population within a marine reserve has remained stable for more than a decade. Marine Ecology Progress Series, 576, 1-10.

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Gleason, F. H., Lilje, O., Dang, C., Geraci-Yee, S., & Collier, J. L. (2017). Possible impacts of zoosporic parasites in diseases of commercially important marine mollusc species: part I. Perkinsozoa. Botanica Marina, 60(4), 401-408.

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McDowall, P., & Lynch, H. J. (2017). The importance of topographically corrected null models for analyzing ecological point processes. Ecology.

Madigan, D. J., Baumann, Z., Snodgrass, O. E., Dewar, H., Berman-Kowalewski, M., Weng, K. C., … & Fisher, N. S. (2017). Assessing Fukushima-derived radiocesium in migratory Pacific predators. Environmental Science & Technology, 51(16), 8962-8971.

Scott, R. C., Lubin, D., Vogelmann, A. M., & Kato, S. (2017). West Antarctic Ice Sheet cloud cover and surface radiation budget from NASA A-train satellites. Journal of Climate, 30(16), 6151-6170.

Rountos, K. J., Gobler, C. J., & Pikitch, E. K. (2017). Ontogenetic Differences in Swimming Behavior of Fish Exposed to the Harmful Dinoflagellate Cochlodinium polykrikoides. Transactions of the American Fisheries Society, 146(5), 1081-1091.

Zhou, X., Heus, T., & Kollias, P. (2017). Influences of Drizzle on Stratocumulus Cloudiness and Organization. Journal of Geophysical Research: Atmospheres.

Monastero, R. N., Karimi, R., Nyland, J. F., Harrington, J., Levine, K., & Meliker, J. R. (2017). Mercury exposure, serum antinuclear antibodies, and serum cytokine levels in the Long Island Study of Seafood Consumption: A cross-sectional study in NY, USA. Environmental Research, 156, 334-340.

Parishani, H., Pritchard, M. S., Bretherton, C. S., Wyant, M. C., & Khairoutdinov, M. (2017). Toward low cloud‐permitting cloud superparameterization with explicit boundary layer turbulence. Journal of Advances in Modeling Earth Systems.

Henderson, M. E., Mills, K. E., Thomas, A. C., Pershing, A. J., & Nye, J. A. Effects of spring onset and summer duration on fish species distribution and biomass along the Northeast United States continental shelf. Reviews in Fish Biology and Fisheries, 1-14.

Kang, Y., Kudela, R. M., & Gobler, C. J. Quantifying nitrogen assimilation rates of individual phytoplankton species and plankton groups during harmful algal blooms via sorting flow cytometry. Limnology and Oceanography: Methods.

Tridon, F., Battaglia, A., Luke, E., & Kollias, P. (2017). Rain retrieval from dual‐frequency radar Doppler spectra: validation and potential for a midlatitude precipitating case‐study. Quarterly Journal of the Royal Meteorological Society, 143(704), 1364-1380.

Taylor, D. (2017) Palm Up, Palm Down. San Antonio, TX: Wings Press.

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Nicolas, J. P., Vogelmann, A. M., Scott, R. C., Wilson, A. B., Cadeddu, M. P., Bromwich, D. H., … & Powers, H. H. (2017). January 2016 extensive summer melt in West Antarctica favoured by strong El Niño. Nature communications, 8, ncomms15799.

Melnychuk, M. C., Dunton, K. J., Jordaan, A., McKown, K. A., & Frisk, M. G. (2017). Informing conservation strategies for the endangered Atlantic sturgeon using acoustic telemetry and multi‐state mark–recapture models. Journal of Applied Ecology, 54(3), 914-925.

Miller, C., Karimi, R., Zhang, Q., Yang, J., & Meliker, J. (2017). Mercury, eicosapentanoic acid and docosahexaenoic acid demonstrate limited effect on plasma paraoxonase-1 activity and blood pressure among avid seafood consumers in the Long Island Study of Seafood Consumption, NY, USA. International journal of hygiene and environmental health, 220(2), 373-377.

Isaacman-VanWertz, G., Massoli, P., O’Brien, R.E., Nowak, J.B., Canagaratna, M.R., Jayne, J.T., Worsnop, D.R., Su, L., Knopf, D.A., Misztal, P.K. and Arata, C., (2017). Using advanced mass spectrometry techniques to fully characterize atmospheric organic carbon: current capabilities and remaining gaps. Faraday Discussions.

Acquistapace, C., Kneifel, S., Löhnert, U., Kollias, P., Maahn, M., & Bauer-Pfundstein, M. (2017). Optimizing observations of drizzle onset with millimeter-wavelength radars. Atmospheric Measurement Techniques, 10(5), 1783-1802.

Chen, J., Pycke, B. F., Brownawell, B. J., Kinney, C. A., Furlong, E. T., Kolpin, D. W., & Halden, R. U. (2017). Occurrence, temporal variation, and estrogenic burden of five parabens in sewage sludge collected across the United States. Science of The Total Environment, 593, 368-374.

Rosen, B. H., Davis, T. W., Gobler, C. J., Kramer, B. J., & Loftin, K. A. (2017). Cyanobacteria of the 2016 Lake Okeechobee and Okeechobee Waterway harmful algal bloom (No. 2017-1054). US Geological Survey.

Price, R.E., and Giovannelli, D. 2017. A Review of the Geochemistry and Microbiology of Marine Shallow-Water Hydrothermal Vents, Reference Module in Earth Systems and Environmental Sciences, Elsevier, 2017. 30-May-17. doi: 10.1016/B978-0-12-409548-9.09523-3.

Yang, K., Davidson, R. A., Nozick, L. K., Blanton, B., & Colle, B. (2017). Scenario-Based Hazard Trees for Depicting Resolution of Hurricane Uncertainty over Time. Natural Hazards Review, 18(3), 04017001.

Brzezinski, M. A., Krause, J. W., Baines, S. B., Collier, J. L., & Ohnemus, D. C. (2017). Patterns and regulation of silicon accumulation in Synechococcus spp. Journal of Phycology.

Farhadzadeh, A. (2017). A study of Lake Erie seiche and low frequency water level fluctuations in the presence of surface ice. Ocean Engineering, 135, 117-136.

Rider, T. (2017). Review of Between Stony Brook Harbor Tides: The Natural History of a Long Island Pocket Bay by R. Lawrence Swanson and Malcolm J. Bowman. Long Island History Journal, Vol 26-1

Swanson, R. L., Wilson, R., Brownawell, B., & Willig, K. (2017). Environmental consequences of the flooding of the Bay Park Sewage Treatment Plant during Superstorm Sandy. Marine Pollution Bulletin.

Lee, C. S., & Fisher, N. S. (2017). Bioaccumulation of methylmercury in a marine copepod. Environmental toxicology and chemistry, 36(5), 1287-1293.

Mahmoudi, N., Beaupré, S. R., Steen, A. D., & Pearson, A. (2017). Sequential bioavailability of sedimentary organic matter to heterotrophic bacteria. Environmental Microbiology.

Narenpitak, P., Bretherton, C. S., & Khairoutdinov, M. F. (2017). Cloud and circulation feedbacks in a near‐global aquaplanet cloud‐resolving model. Journal of Advances in Modeling Earth Systems.

Krause, J. W., Brzezinski, M. A., Baines, S. B., Collier, J. L., Twining, B. S., & Ohnemus, D. C. (2017). Picoplankton contribution to biogenic silica stocks and production rates in the Sargasso Sea. Global Biogeochemical Cycles.

Jackson, L. J., Furman, B. T., & Peterson, B. J. (2017). Morphological response of Zostera marina reproductive shoots to fertilized porewater. Journal of Experimental Marine Biology and Ecology, 489, 1-6.

Aller, J. Y., Radway, J. C., Kilthau, W. P., Bothe, D. W., Wilson, T. W., Vaillancourt, R. D., … & Knopf, D. A. (2017). Size-resolved characterization of the polysaccharidic and proteinaceous components of sea spray aerosol. Atmospheric Environment, 154, 331-347.

Gobler, C. J., Doherty, O. M., Hattenrath-Lehmann, T. K., Griffith, A. W., Kang, Y., & Litaker, R. W. (2017). Ocean warming since 1982 has expanded the niche of toxic algal blooms in the North Atlantic and North Pacific oceans. Proceedings of the National Academy of Sciences, 201619575. doi:10.1073/pnas.1619575114

Farhadzadeh, A., Hashemi, M. R., & Neill, S. (2017). Characterizing the Great Lakes Hydrokinetic Renewable Energy Resource: Lake Erie Wave, Surge and Seiche Characteristics. Energy.

Suter, E. A., Scranton, M. I., Chow, S., Stinton, D., Medina Faull, L., & Taylor, G. T. (2017). Niskin bottle sample collection aliases microbial community composition and biogeochemical interpretation. Limnology and Oceanography, 62(2), 606-617.

Humphries, G. R. W., Naveen, R., Schwaller, M., Che-Castaldo, C., McDowall, P., Schrimpf, M., & Lynch, H. J. (2017). Mapping Application for Penguin Populations and Projected Dynamics (MAPPPD): data and tools for dynamic management and decision support. Polar Record, 1-7.

Zheng, M., Chang, E.K., Colle, B.A., Luo, Y. and Zhu, Y., 2017. Applying Fuzzy Clustering to a Multimodel Ensemble for US East Coast Winter Storms: Scenario Identification and Forecast Verification. Weather and Forecasting, 32(3), pp.881-903.

Riedinger N, Brunner B, Krastel S, Arnold GL, Wehrmann LM, Formolo MJ, Beck A, Bates SM, Henkel S, Kasten S and Lyons TW (2017) Sulfur cycling in an iron oxide-dominated, dynamic marine depositional system: The Argentine continental margin. Frontiers in Earth Sciences 5:33. doi:10.3389/feart.2017.00033

Farhadzadeh, A., & Gangai, J. (2017). Numerical Modeling of Coastal Storms for Ice-Free and Ice-Covered Lake Erie. Journal of Coastal Research.

Schmidt, S. K., Darcy, J. L., Sommers, P., Gunawan, E., Knelman, J. E., & Yager, K. (2017). Freeze–thaw revival of rotifers and algae in a desiccated, high-elevation (5500 meters) microbial mat, high Andes, Perú. Extremophiles, 1-8.

Roberts, K. J., Colle, B. A., & Korfe, N. (2017). Impact of Simulated Twenty-First-Century Changes in Extratropical Cyclones on Coastal Flooding at the Battery, New York City. Journal of Applied Meteorology and Climatology, 56(2), 415-432.

Painemal, D., Chiu, J. Y. C., Minnis, P., Yost, C., Zhou, X., Cadeddu, M., … & Kollias, P. (2017). Aerosol and cloud microphysics covariability in the northeast Pacific boundary layer estimated with ship‐based and satellite remote sensing observations. Journal of Geophysical Research: Atmospheres, 122(4), 2403-2418.

Cernadas-Martín S, Suter EA, Scranton MI, Astor Y, Taylor GT (2017) Aerobic and anaerobic ammonium oxidizers in the Cariaco Basin: distributions of major taxa and nitrogen species across the redoxcline. Aquat Microb Ecol 79:31-48. https://doi.org/10.3354/ame01817

Foley, C. M., Lynch, M. A., Thorne, L. H., & Lynch, H. J. (2017). Listing Foreign Species under the Endangered Species Act: A Primer for Conservation Biologists. BioScience, bix027.

Chen, J., Pycke, B. F., Brownawell, B. J., Kinney, C. A., Furlong, E. T., Kolpin, D. W., & Halden, R. U. (2017). Occurrence, temporal variation, and estrogenic burden of five parabens in sewage sludge collected across the United States. Science of The Total Environment, 593, 368-374.

Wolfe, C. L., Cessi, P., & Cornuelle, B. D. (2017). An Intrinsic Mode of Interannual Variability in the Indian Ocean. Journal of Physical Oceanography, 47(3), 701-719.

Kim, H. M., Zhou, Y., & Alexander, M. A. (2017). Changes in atmospheric rivers and moisture transport over the Northeast Pacific and western North America in response to ENSO diversity. Climate Dynamics, 1-14.

Xie, J., & Zhang, M. (2017). Role of internal atmospheric variability in the 2015 extreme winter climate over the North American continent. Geophysical Research Letters.

Liu, Q., Collier, J. L., & Allam, B. (2017). Seasonality of QPX disease in the Raritan Bay (NY) wild hard clam (Mercenaria mercenaria) population. Aquaculture Research, 48(3), 1269-1278.

Ma, C. G., & Chang, E. K. (2017). Impacts of storm track variations on winter time extreme weather events over the continental US. Journal of Climate, (2017).

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Rahman, S., Aller, R. C., & Cochran, J. K. (2016). Cosmogenic 32Si reveals biogenic silica burial in deltas rivals the Southern Ocean siliceous ooze. Geophysical Research Letters, 43, 7124-7142.

Zhang, M., Somerville, R. C., & Xie, S. (2016). The SCM concept and creation of ARM forcing datasets. Meteorological Monographs, 57, 24-1.

Madigan, D.J., Chiang, W.C., Wallsgrove, N.J., Popp, B.N., Kitagawa, T., Choy, C.A., Tallmon, J., Ahmed, N., Fisher, N.S. and Sun, C.L., (2016). Intrinsic tracers reveal recent foraging ecology of giant Pacific bluefin tuna at their primary spawning grounds. Marine Ecology Progress Series, 553, pp.253-266.

Swanson, L., Dorsch, M., Giampieri, M., Orton, P., Parris, A. S., & Sanderson, E. W. (2016). Dynamics of the Biophysical Systems of Jamaica Bay. In Prospects for Resilience (pp. 65-89). Island Press/Center for Resource Economics.

Harke, M. J., Steffen, M. M., Gobler, C. J., Otten, T. G., Wilhelm, S. W., Wood, S. A., & Paerl, H. W. (2016). A review of the global ecology, genomics, and biogeography of the toxic cyanobacterium, Microcystis spp. Harmful Algae, 54, 4-20.

Davis, T. W., & Gobler, C. J. (2016). Preface for Special Issue on “Global expansion of harmful cyanobacterial blooms: Diversity, ecology, causes, and controls”. Harmful Algae, 54, 1-3.

Gobler, C. J., Burkholder, J. M., Davis, T. W., Harke, M. J., Johengen, T., Stow, C. A., & Van de Waal, D. B. (2016). The dual role of nitrogen supply in controlling the growth and toxicity of cyanobacterial blooms. Harmful Algae, 54, 87-97.

Wang, L., Han, J., Sundahl, B., Thornton, S., Zhu, Y., Zhou, R., Jaye, C., Liu, H., Li, Z.Q., Taylor, G.T. and Fischer, D.A., 2016. Ligand-induced dependence of charge transfer in nanotube–quantum dot heterostructures. Nanoscale, 8(34), pp.15553-15570.

Thorne, L. H., Conners, M. G., Hazen, E. L., Bograd, S. J., Antolos, M., Costa, D. P., & Shaffer, S. A. (2016). Effects of El Niño-driven changes in wind patterns on North Pacific albatrosses. Journal of The Royal Society Interface, 13(119), 20160196.

Zarzycki, C. M., Reed, K. A., Bacmeister, J. T., Craig, A. P., Bates, S. C., & Rosenbloom, N. A. (2016). Impact of surface coupling grids on tropical cyclone extremes in high-resolution atmospheric simulations. Geoscientific Model Development, 9(2), 779-788.

Smirnov, O., Zhang, M., Xiao, T., Orbell, J., Lobben, A., & Gordon, J. (2016). The relative importance of climate change and population growth for exposure to future extreme droughts. Climatic Change, 138(1-2), 41-53.

Kalesse, H., Szyrmer, W., Kneifel, S., Kollias, P., & Luke, E. (2016). Fingerprints of a riming event on cloud radar Doppler spectra: observations and modeling. Atmospheric Chemistry and Physics, 16(5), 2997-3012.

Bender, N. A., Crosbie, K., & Lynch, H. J. (2016). Patterns of tourism in the Antarctic Peninsula region: a 20-year analysis. Antarctic Science, 28(03), 194-203.

Kim, H. M., Kim, D., Vitart, F., Toma, V. E., Kug, J. S., & Webster, P. J. (2016). MJO Propagation across the Maritime Continent in the ECMWF Ensemble Prediction System. Journal of Climate, 29(11), 3973-3988.

Laskin, A., Gilles, M. K., Knopf, D. A., Wang, B., & China, S. (2016). Progress in the analysis of complex atmospheric particles. Annual Review of Analytical Chemistry, 9, 117-143.

Bony, S., Stevens, B., Coppin, D., Becker, T., Reed, K. A., Voigt, A., & Medeiros, B. (2016). Thermodynamic control of anvil cloud amount. Proceedings of the National Academy of Sciences, 201601472.

Chen, C. Y., Ward, D. M., Williams, J. J., & Fisher, N. S. (2016). Metal bioaccumulation by estuarine food webs in New England, USA. Journal of marine science and engineering, 4(2), 41.

Gilbert, F., Hulth, S., Grossi, V., & Aller, R. C. (2016). Redox oscillation and benthic nitrogen mineralization within burrowed sediments: An experimental simulation at low frequency. Journal of Experimental Marine Biology and Ecology, 482, 75-84.

Woodin, S. A., Volkenborn, N., Pilditch, C. A., Lohrer, A. M., Wethey, D. S., Hewitt, J. E., & Thrush, S. F. (2016). Same pattern, different mechanism: Locking onto the role of key species in seafloor ecosystem process. Scientific Reports, 6, 26678.

Kawano, M., Uno, S., Koyama, J., Kokushi, E., & McElroy, A. (2016). Effects of oxygenated polycyclic aromatic hydrocarbons on the early life stages of Japanese medaka. Environmental Science and Pollution Research, 1-8.

Wang, W.-L., Armstrong, R. A., Cochran, J. K., and Heilbrun, C. (2016) 230Th and 234Th as coupled tracers of particle cycling in the ocean: A maximum likelihood approach., Deep Sea Research Part I: Oceanographic Research Papers, 111, 61-70., http://dx.doi.org/10.1016/j.dsr.2016.02.003.

Warren, J. D., Leach, T. H., & Williamson, C. E. (2016). Measuring the distribution, abundance, and biovolume of zooplankton in an oligotrophic freshwater lake with a 710 kHz scientific echosounder. Limnology and Oceanography: Methods.

Landman, N. H., Kruta, I., Denton, J. S., & Cochran, J. K. (2016). Getting unhooked: comment on the hypothesis that heteromorph ammonites were attached to kelp branches on the sea floor, as proposed by. Journal of Molluscan Studies, 82(2), 351-355

Pershing, A.J., Alexander, M.A., Hernandez, C.M., Kerr, L.A., Le Bris, A., Mills, K.E., Nye, J.A., Record, N.R., Scannell, H.A., Scott, J.D. and Sherwood, G.D., 2016. Response to Comments on “Slow adaptation in the face of rapid warming leads to collapse of the Gulf of Maine cod fishery”. Science, 352(6284), pp.423-423.

Shackell, N. L., Frank, K. T., Nye, J. A., & den Heyer, C. E. (2016). A transboundary dilemma: dichotomous designations of Atlantic halibut status in the Northwest Atlantic. ICES Journal of Marine Science: Journal du Conseil, fsw042.

Gobler, C. J., & Baumann, H. (2016). Hypoxia and acidification in ocean ecosystems: coupled dynamics and effects on marine life. Biology Letters, 12(5), 20150976.

Young, C. S., & Gobler, C. J. (2016). Ocean Acidification Accelerates the Growth of Two Bloom-Forming Macroalgae. PloS one, 11(5), e0155152.

Druffel, E. R. M., Beaupré, S. R., & Ziolkowski, L. A. (2016). Radiocarbon in the Oceans. In Radiocarbon and Climate Change (pp. 139-166). Springer International Publishing.

Chapperon, C., Volkenborn, N., Clavier, J., Séité, S., Seabra, R., & Lima, F. P. (2016). Exposure to solar radiation drives organismal vulnerability to climate: Evidence from an intertidal limpet. Journal of Thermal Biology, 57, 92-100.

Trumbore, S. E., Xu, X., Santos, G. M., Czimczik, C. I., Beaupré, S. R., Pack, M. A., … & Ziolkowski, L. (2016). Preparation for radiocarbon analysis. In Radiocarbon and Climate Change (pp. 279-315). Springer International Publishing.

Wehrmann, L. M., Ockert, C., Mix, A. C., Gussone, N., Teichert, B. M. A., & Meister, P. (2016). Repeated occurrences of methanogenic zones, diagenetic dolomite formation and linked silicate alteration in southern Bering Sea sediments (Bowers Ridge, IODP Exp. 323 Site U1341). Deep Sea Research Part II: Topical Studies in Oceanography, 125, 117-132.

Moore, M.J, McElroy, A.E. Geoghegan, P., Siskey, M.R. and Pembroke, A.E. 2016. Founder Monitoring Report: 2015 Results. Boston:Massachusetts Water Resources Authority. Report 2016-05. 40 pp.

Pandey, R., Usui, K., Livingstone, R. A., Fischer, S. A., Pfaendtner, J., Backus, E. H., Knopf, D.A. … & Scheel, J. F. (2016). Ice-nucleating bacteria control the order and dynamics of interfacial water. Science Advances, 2(4), e1501630.

Chen, J., Liu, Y., Zhang, M., & Peng, Y. (2016). New Understanding and Quantification of the Regime Dependence of Aerosol‐Cloud Interaction for Studying Aerosol Indirect Effects. Geophysical Research Letters.

Martinez, C. M., Rohlf, F. J., & Frisk, M. G. (2016). Sexual dimorphism in sister species of Leucoraja skate and its relationship to reproductive strategy and life history. Evolution & Development.

Cahill, A. E., & Levinton, J. S. (2016). Genetic differentiation and reduced genetic diversity at the northern range edge of two species with different dispersal modes. Molecular ecology, 25(2), 515-526.

Soulet, G., Skinner, L. C., Beaupré, S. R., & Galy, V. (2016). A Note on Reporting of Reservoir 14 C Disequilibria and Age Offsets. Radiocarbon, 58(1), 205-211.

Baines, S. B., Chen, X., Vogt, S., Fisher, N. S., Twining, B. S., & Landry, M. R. (2016). Microplankton trace element contents: implications for mineral limitation of mesozooplankton in an HNLC area. Journal of Plankton Research, fbv109.

Trammell, J. H., Jiang, X., Li, L., Kao, A., Zhang, G. J., Chang, E. K., & Yung, Y. (2016). Temporal and Spatial Variability of Precipitation from Observations and Models*. Journal of Climate, 29(7), 2543-2555.

Bluestein, H. B., French, M. M., Snyder, J. C., & Houser, J. B. (2016). Doppler Radar Observations of Anticyclonic Tornadoes in Cyclonically Rotating, Right-Moving Supercells. Monthly Weather Review, 144(4), 1591-1616.

Fisher, S. C., Phillips, P. J., Brownawell, B. J., & Browne, J. P. (2016). Comparison of wastewater-associated contaminants in the bed sediment of Hempstead Bay, New York, before and after Hurricane Sandy. Marine Pollution Bulletin.

Levy, H., Clucas, G.V., Rogers, A.D., Leaché, A.D., Ciborowski, K.L., Polito, M.J., Lynch, H.J., Dunn, M.J. and Hart, T., (2016). Population structure and phylogeography of the Gentoo Penguin (Pygoscelis papua) across the Scotia Arc. Ecology and evolution.

Griffith, A. W., & Gobler, C. J. (2016). Temperature controls the toxicity of the ichthyotoxic dinoflagellate Cochlodinium polykrikoides. MEPS, 545, 63-76.

Reed, K. A., & Medeiros, B. (2016). A reduced complexity framework to bridge the gap between AGCMs and cloud‐resolving models. Geophysical Research Letters.

Pascal, L., Maire, O., Volkenborn, N., Lecroart, P., Bichon, S., de Montaudouin, X., … & Deflandre, B. (2016). Influence of the mud shrimp Upogebia pusilla (Decapoda: Gebiidea) on solute and porewater exchanges in an intertidal seagrass (Zostera noltei) meadow of Arcachon Bay: An experimental assessment. Journal of Experimental Marine Biology and Ecology, 477, 69-79.

Sanchez-Franks, A., Hameed, S., & Wilson, R. E. (2015). The Icelandic Low as a Predictor of the Gulf Stream Northwall Position. Journal of Physical Oceanography, (2015).

Allam, B., & Espinosa, E. P. (2016). Bivalve immunity and response to infections: Are we looking at the right place?. Fish & Shellfish Immunology.

Moniruzzaman, M., Gann, E. R., LeCleir, G. R., Kang, Y., Gobler, C. J., & Wilhelm, S. W. (2016). Diversity and dynamics of algal Megaviridae members during a harmful brown tide caused by the pelagophyte, Aureococcus anophagefferens. FEMS Microbiology Ecology, fiw058.

Chapperon, C., Volkenborn, N., Clavier, J., Séité, S., Seabra, R., & Lima, F. P. (2016). Exposure to solar radiation drives organismal vulnerability to climate: Evidence from an intertidal limpet. Journal of Thermal Biology, 57, 92-100.

Witharana, C., LaRue, M. A., & Lynch, H. J. (2016). Benchmarking of data fusion algorithms in support of earth observation based Antarctic wildlife monitoring. ISPRS Journal of Photogrammetry and Remote Sensing, 113, 124-143.

Karimi, R., Vacchi-Suzzi, C., & Meliker, J. R. (2016). Mercury exposure and a shift toward oxidative stress in avid seafood consumers. Environmental research, 146, 100-107.

Chang, E. K., Ma, C. G., Zheng, C., & Yau, A. M. (2016). Observed and projected decrease in Northern Hemisphere extratropical cyclone activity in summer and its impacts on maximum temperature. Geophysical Research Letters, 43(5), 2200-2208.

Wang, K., del Castillo, C., Corre, E., Espinosa, E. P., & Allam, B. (2016). Clam focal and systemic immune responses to QPX infection revealed by RNA-seq technology. BMC genomics, 17(1), 1.

Choi, J., Son, S. W., Ham, Y. G., Lee, J. Y., & Kim, H. M. (2016). Seasonal-to-interannual prediction skills of near-surface air temperature in the CMIP5 decadal hindcast experiments. Journal of Climate, (2016).

Giner, J. L., Ceballos, H., Tang, Y. Z., & Gobler, C. J. (2016). Sterols and Fatty Acids of the Harmful Dinoflagellate Cochlodinium polykrikoides. Chemistry & biodiversity, 13(2), 249-252.

O’Leary, S. J., Martinez, C. M., Baumann, H., Abercrombie, D. L., Poulakis, G. R., Murray, C. H., … & Chapman, D. D. (2016). Population genetics and geometric morphometrics of the key silverside, Menidia conchorum, a marine fish in a highly-fragmented, inland habitat. Bulletin of Marine Science.

Espinosa, E. P., Cerrato, R. M., Wikfors, G. H., & Allam, B. (2016). Modeling food choice in the two suspension-feeding bivalves, Crassostrea virginica and Mytilus edulis. Marine Biology, 163(2), 1-13.

Ladino, L.A., Yakobi-Hancock, J.D., Kilthau, W.P., Mason, R.H., Si, M., Li, J., Miller, L.A., Schiller, C.L., Huffman, J.A., Aller, J.Y. and Knopf, D.A., 2016. Addressing the ice nucleating abilities of marine aerosol: A combination of deposition mode laboratory and field measurements. Atmospheric Environment.

Volkenborn N., Woodin S.A., Wethey D.S., Polerecky L. (2016) Bioirrigation in marine sediments. Reference Module in Earth Systems and Environmental Sciences. DOI: 10.1016/B978-0-12-409548-9.09525-7

Cahill, A. E., & Levinton, J. S. (2016). Genetic differentiation and reduced genetic diversity at the northern range edge of two species with different dispersal modes. Molecular ecology, 25(2), 515-526.

Pinaud, S., Portela, J., Duval, D., Nowacki, F.C., Olive, M.A., Allienne, J.F., Galinier, R., Dheilly, N.M., Kieffer-Jaquinod, S., Mitta, G. and Théron, A., 2016. A Shift from Cellular to Humoral Responses Contributes to Innate Immune Memory in the Vector Snail Biomphalaria glabrata. PLoS Pathog, 12(1), p.e1005361.

Hattenrath-Lehmann, T. K., Zhen, Y., Wallace, R. B., Tang, Y. Z., & Gobler, C. J. (2016). Mapping the distribution of cysts from the toxic dinoflagellate, Cochlodinium polykrikoides, in bloom-prone estuaries using a novel fluorescence in situ hybridization assay. Applied and environmental microbiology, 82 (4):1114-1125; 10.1128/AEM.03457-15 FEB 2016

Liu, P., Zhang, Q., Zhang, C., Zhu, Y., Khairoutdinov, M., Kim, H. M., … & Zhang, M. (2016). A Revised Real-Time Multivariate MJO Index. Monthly Weather Review, 144 (2):627-642; 10.1175/MWR-D-15-0237.1 FEB 2016

Li, Y., & Zhang, M. (2016). Cumulus over the Tibetan Plateau in the Summer Based on CloudSat-CALIPSO Data. Journal of Climate, 29 (3):1219-1230; 10.1175/JCLI-D-15-0492.1 FEB 2016.

Chapman, D. D., Feldheim, K.A., Papastamatiou, Y., Hueter, R.H. There and Back Again: A review of residency and return migrations in sharks, with implications for population structure and management. Annual Reviews in Marine Science (Available online in advance of publication).

Ashe, J., Feldheim, K.A., Fields, A., Brooks, E.J., Skomal, G., Gruber, S.H., Chapman, D. D. (In Press). Local population structure and context-dependent isolation by distance in a large coastal shark. Marine Ecology Progress Series.

Kessel, S.T., Chapman, D. D., Franks, B. R., Gedamke, T., Gruber, S. H., Newman, M.J., White, E. R., Perkins, R. G. (In Press). Predictable temperature regulated residency, movement and migration in a large, highly-mobile marine predator. Marine Ecology Progress Series.

Alpert, P. A. & Knopf, D. A. (2016). Analysis of isothermal and cooling-rate-dependent immersion freezing by a unifying stochastic ice nucleation model, Atmospheric Chemistry and Physics 16 (4), 2083-2107

Stubler, A. D., A. K. Stevens and B. J. Peterson. 2016. Using community-wide recruitment and succession patterns to assess sediment stress on Jamaican coral reefs. Journal of Experimental Marine Biology and Ecology 474: 29-38.

Giner, J. L., Ceballos, H., Tang, Y. Z., & Gobler, C. J. (2016). Sterols and Fatty Acids of the Harmful Dinoflagellate Cochlodinium polykrikoides. Chemistry & Biodiversity, 13(2), 249-252.

Espinosa, E. P., Koller, A., & Allam, B. (2016). Proteomic characterization of mucosal secretions in the eastern oyster, Crassostrea virginica. Journal of proteomics, 132, 63-76. DOI information: 10.1016/j.jprot.2015.11.018

Baines, S.B., X. Chen, S. Vogt, N.S. Fisher, B.S. Twining, and M.R. Landry. In press. Elemental content of single-celled plankton in the Costa Rica Upwelling Dome and mineral limitation of mesozooplankton. Journal of Plankton Research

Baines, S.B., X. Chen, B.S. Twining, N.S. Fisher, and M.R. Landry. In press. Factors affecting Fe and Zn contents of mesozooplankton from the Costa Rica Dome. Journal of Plankton Research

Martinez, C.M., F.J. Rohlf and M.G. Frisk (In Press). Sexual dimorphism in sister species of Leucoraja skate and its relationship to reproductive strategy and life history. Evolution & Development.

Li, H., & Colle, B. A. 2015: Future Changes in Convective Storm Days over the Northeastern United States Using Linear Discriminant Analysis Applied to CMIP5 Predictions. J. Climate. doi: http://dx.doi.org/10.1175/JCLI-D-14-00831.1.

Colle, B. A., Sienkiewicz, M. J., Archer, C., Veron, D., Veron, F., Kempton, W., & Mak, J. E. (2016). Improving the mapping and prediction of offshore wind resources (IMPOWR): Experimental overview and first results. Bulletin of the American Meteorological Society, 97(8), 1377-1390.

Pascal, L., Maire, O., Volkenborn, N., Lecroart, P., Bichon, S., de Montaudouin, X., … & Deflandre, B. (2016). Influence of the mud shrimp Upogebia pusilla (Decapoda: Gebiidea) on solute and porewater exchanges in an intertidal seagrass (Zostera noltei) meadow of Arcachon Bay: An experimental assessment. Journal of Experimental Marine Biology and Ecology, 477, 69-79.

Dunton, K. J., Jordaan, A., Secor, D. H., Martinez, C. M., Kehler, T., Hattala, K. A., … & Frisk, M. G. (2016). Age and Growth of Atlantic Sturgeon in the New York Bight. North American Journal of Fisheries Management, 36(1), 62-73.

Trammell, J. H., Jiang, X., Li, L., Kao, A., Zhang, G. J., Chang, E. K., & Yung, Y. (2016). Temporal and Spatial Variability of Precipitation from Observation and Model. Journal of Climate, (2016).

Espinosa, E. P., Cerrato, R. M., Wikfors, G. H., & Allam, B. (2016). Modeling food choice in the two suspension-feeding bivalves, Crassostrea virginica and Mytilus edulis. Marine Biology, 163(2), 1-13.

Martinez, C. M., Rohlf, F. J., & Frisk, M. G. (2016). Re‐evaluation of batoid pectoral morphology reveals novel patterns of diversity among major lineages. Journal of morphology, 277(4), 482-493.

Erickson, M. J., Charney, J. J., & Colle, B. A. (2015). Development of a Fire Weather Index Using Meteorological Observations within the Northeast United States. Journal of Applied Meteorology and Climatology, (2015).

Cuesta, F., Muriel, P., Llambi, L.D., Halloy, S., Aguirre, N., Beck, S., Carilla, J., Menses, R.I., Cuello, S., Grau, A., Gamez, L., Irazabel, J., Jacome, J., Jaramillo, R., Ramirez, L., Samaniego, N., Suarez-Duque, D., Thompson, N., Tupuachi, A., Viñas, P., Yager, K., Becerra, M., Pauli, H., Gosling, W. (2016) Latitudinal and altitudinal patterns of plant community diversity on mountain summits across the tropical Andes. Ecography

Wang, X. H., Wang, D. P., Sun, Z., He, Z., Liu, H., Guan, W., … & Bao, X. (2016). International scientists discuss impact on China’s estuarine and coastal environment by intensive anthropogenic activities–The 2nd workshop on sediment dynamics of muddy coasts and estuaries: Physics, biology and their interactions, Zhoushan, China, 23–26 October, 2015. Estuarine, Coastal and Shelf Science, 168, ii-iii.

Espinosa, E. P., Koller, A., & Allam, B. (2016). Proteomic characterization of mucosal secretions in the eastern oyster, Crassostrea virginica. Journal of proteomics, 132, 63-76.

Wang, K., Espinosa, E. P., Tanguy, A., & Allam, B. (2016). Alterations of the immune transcriptome in resistant and susceptible hard clams (Mercenaria mercenaria) in response to Quahog Parasite Unknown (QPX) and temperature. Fish & shellfish immunology, 49, 163-176.

Stubler, A. D., Stevens, A. K., & Peterson, B. J. (2016). Using community-wide recruitment and succession patterns to assess sediment stress on Jamaican coral reefs. Journal of Experimental Marine Biology and Ecology,474, 29-38.

Martinez, C. M., Rohlf, F. J. and Frisk, M. G. (2016), Sexual dimorphism in sister species of Leucoraja skate and its relationship to reproductive strategy and life history. Evolution & Development. doi: 10.1111/ede.12175

Pochron, S. (2016) Monkeys In The Garden Irven DeVore and the Revolution in the Science of Social Behavior. Smashwords.

Pochron, S. (2016) Monkeys In The Garden Irven DeVore and the Revolution in the Science of Social Behavior. Smashwords.

Rider, Tara. The Once and Future Queen: The Imagining and Reimagining of Ireland. 2016. New Trails and Beaten Paths in Celtic Studies.

Tang, S., Zhang, M., & Xie, S. (2016). An ensemble constrained variational analysis of atmospheric forcing data and its application to evaluate clouds in CAM5. Journal of Geophysical Research: Atmospheres, 121(1), 33-48.

Yee, A. K., & Padilla, D. K. (2015). Allometric Scaling of the Radula in the Atlantic Slippersnail Crepidula fornicata. Journal of Shellfish Research, 34(3), 903-907.

Bretherton, C. S., & Khairoutdinov, M. F. (2015). Convective self‐aggregation feedbacks in near‐global cloud‐resolving simulations of an aquaplanet. Journal of Advances in Modeling Earth Systems.

Supinie, T. A., Jung, Y., Xue, M., Stensrud, D. J., French, M. M., & Bluestein, H. B. (2015). Impact of VORTEX2 Observations on Analyses and Forecasts of the 5 June 2009 Goshen County, Wyoming, Supercell. Monthly Weather Review, (2015).

Bokuniewicz, H., Cochran, J. K., Garcia-Orellana, J., Rodellas, V., Daniel, J. W., & Heilbrun, C. (2015). Intertidal percolation through beach sands as a source of 224,223 Ra to Long Island Sound, New York, and Connecticut, United States. Journal of Marine Research, 73(5), 123-140.

Baumann, H., Wells, R. J. D., Rooker, J. R., Zhang, S., Baumann, Z., Madigan, D. J., … & Fisher, N. S. (2015). Combining otolith microstructure and trace elemental analyses to infer the arrival of juvenile Pacific bluefin tuna in the California current ecosystem. ICES Journal of Marine Science: Journal du Conseil, 72(7), 2128-2138.

Allam, B., and Raftos, D., Immune responses to infectious diseases in bivalves, Journal of Invertebrate Pathology 131: 121-136, ISSN 0022-2011,http://dx.doi.org/10.1016/j.jip.2015.05.005.

Allam, B., & Espinosa, P. E. (2015, April). The multiple, central, roles of mucosal secretions in marine bivalves. In INTEGRATIVE AND COMPARATIVE BIOLOGY (Vol. 55, pp. E4-E4). JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA: OXFORD UNIV PRESS INC.

McCann, M. J., & Padilla, D. K. (2015). Effects of a patchy food environment across life history stages. Journal of Experimental Marine Biology and Ecology, 472, 135-141.

Alpert, P. A., & Knopf, D. A. (2015). Analysis of isothermal and cooling rate dependent immersion freezing by a unifying stochastic ice nucleation model. Atmospheric Chemistry and Physics Discussions, 15(9), 13109-13166.

Fritts, D. C., Wang, L., Geller, M. A., Lawrence, D. A., Werne, J., & Balsley, B. B. (2015). Numerical Modeling of Multi-Scale Dynamics at a High Reynolds Number: Instabilities, Turbulence, and an Assessment of Ozmidov and Thorpe Scales. Journal of the Atmospheric Sciences, (2015).

Baines, S. B., Chen, X., Twining, B. S., Fisher, N. S., & Landry, M. R. (2015). Factors affecting Fe and Zn contents of mesozooplankton from the Costa Rica Dome. Journal of Plankton Research, fbv098.

Khairoutdinov, M., & Zhou, X. (2015, April). Changes in sub-daily precipitation extremes in a global climate model with super-parameterization under CO2 warming. In EGU General Assembly Conference Abstracts (Vol. 17, p. 7931).

Gribble, M. O., Karimi, R., Feingold, B. J., Nyland, J. F., O’Hara, T. M., Gladyshev, M. I., & Chen, C. Y. (2015). Mercury, selenium and fish oils in marine food webs and implications for human health. Journal of the Marine Biological Association of the United Kingdom, 1-17.

Zhou, X-H, D-P. Wang, and D. Chen, 2015b. Validating satellite altimeter measurements of internal tides with long-term TAO/TRITON buoy observations at 2oS-156oE. Geophy. Res. Lett., 42, doi:10.1002/2015GL063669.

Wang L; Han J, Zhu Y, Zhou R, Jaye C, Liu H, Li Z-Q, Taylor G, Fischer D, Appenzelle, J, Wong SS. 2015. Probing the dependence of electron transfer on size and coverage in carbon nanotube-quantum dot heterostructures. J Phys Chem 119: 26327–26338

Chao Ye, Weihua Qiao, Xiaobin Yu, Xiaojun Ji, He Huang, J. L. Collier, Liming Liu. 2015. Reconstruction and analysis of the genome-scale metabolic model ofschizochytrium limacinum SR21 for docosahexaenoic acid production. BMC Genomics 16 :799 (11pp). DOI 10.1186/s12864-015-2042-y

Mars Brisbin M, McElroy A, Pales Espinosa E, Allam B. 2015. Antimicrobial activity in the cuticle of the American lobster, Homarus americanus. Fish and Shellfish Immunology. 44: 542-546.

Lin, Yanluan Lin, Ming Zhao and Minghua Zhang, 2015: Tropical cyclone rainfall area controlled by relative sea surface temperature, Nature Communications 6, 6591m doi:10.1038/ncomms7591

Ridley, H.E., Y. Asmerom, J.U.L. Baldini, S.F.M. Breitenbach, V.V. Aquino, K.M. Prufer, Brendan J. Culleton, V. Polyak, F.A. Lechleitner, D.J. Kennett, M. Zhang, N. Marwan, C.G. Macpherson, L.M. Baldini, T. Xiao, J.L. Peterkin, J. Awe, G.H. Haug, 2015: Aerosol forcing of the position of the intertropical convergence zone since AD 1550. Nat. Geosci., 8 (2015)http://dx.doi.org/10.1038/ngeo2353

Zhang, M., 2015. Coupled Ocean-Atmosphere Models: Physical Processes. P144-152, In: Gerald R.North (editor-in-chief), John Pyle and Fuqing Zhang (editors). Encyclopedia of Atmospheric Sciences, 2nd edition, Vol 4, pp. 144–152. ISBN: 9780123822253, 2998pp, Copyright © 2015 Elsevier Ltd.

Walcker, R., E. J. Anthony, C. Cassou, R.C. Aller, A. Gardel, C. Proisy, J.-M. Martinez, and F. Fromard, 2015, Fluctuations in the extent of mangroves driven by multi-decadal changes in North Atlantic waves. J. Biogeogr., 42, 2209-2219.

A. J. Illingworth, H. W. Barker, A. Beljaars, M. Ceccaldi, H. Chepfer, N. Clerbaux, J. Cole, J. Delanoë, C. Domenech, D. P. Donovan, S. Fukuda, M. Hirakata, R. J. Hogan, A. Huenerbein, P. Kollias, T. Kubota, T. Nakajima, T. Y. Nakajima, T. Nishizawa, Y. Ohno, H. Okamoto, R. Oki, K. Sato, M. Satoh, M. W. Shephard, A. Velázquez-Blázquez, U. Wandinger, T. Wehr, and G.-J. van Zadelhoff, (2015), The EarthCARE Satellite: The Next Step Forward in Global Measurements of Clouds, Aerosols, Precipitation, and Radiation. Bull. Amer. Meteor. Soc., 96, 1311–1332. doi: http://dx.doi.org/10.1175/BAMS-D-12-00227.1

Robert Wood, Matthew Wyant, Christopher S. Bretherton, Jasmine Rémillard, Pavlos Kollias, Jennifer Fletcher, Jayson Stemmler, Simone de Szoeke, Sandra Yuter, Matthew Miller, David Mechem, George Tselioudis, J. Christine Chiu, Julian A. L. Mann, Ewan J. O’Connor, Robin J. Hogan, Xiquan Dong, Mark Miller, Virendra Ghate, Anne Jefferson, Qilong Min, Patrick Minnis, Rabindra Palikonda, Bruce Albrecht, Ed Luke, Cecile Hannay, and Yanluan Lin, (2015), Clouds, Aerosols, and Precipitation in the Marine Boundary Layer: An Arm Mobile Facility Deployment.Bull. Amer. Meteor. Soc., 96, 419–440. doi: http://dx.doi.org/10.1175/BAMS-D-13-00180.1

Chandra, A., Zhang, C., Kollias, P., Matrosov, S., and Szyrmer, W, (2015), Automated rain rate estimates using the Ka-band ARM zenith radar (KAZR), Atmos. Meas. Tech., 8, 3685-3699, doi:10.5194/amt-8-3685-2015.

Battaglia, A. and P. Kollias, (2015), Error Analysis of a Conceptual Cloud Doppler Stereoradar with Polarization Diversity for Better Understanding Space Applications. J. Atmos. Oceanic Technol., 32, 1298–1319. doi: http://dx.doi.org/10.1175/JTECH-D-14-00015.1

Maximilian Maahn, Ulrich Löhnert, Pavlos Kollias, Robert C. Jackson, and Greg M. McFarquhar, (2015), Developing and Evaluating Ice Cloud Parameterizations for Forward Modeling of Radar Moments Using in situ Aircraft Observations. J. Atmos. Oceanic Technol., 32, 880–903. doi: 10.1175/JTECH-D-14-00112.1

Gail Skofronick-Jackson, David Hudak, Walter Petersen, Stephen W. Nesbitt, V. Chandrasekar, Stephen Durden, Kirstin J. Gleicher, Gwo-Jong Huang, Paul Joe, Pavlos Kollias, Kimberly A. Reed, Mathew R. Schwaller, Ronald Stewart, Simone Tanelli, Ali Tokay, James R. Wang, and Mengistu Wolde, (2015), Global Precipitation Measurement Cold Season Precipitation Experiment (GCPEX): For Measurement’s Sake, Let It Snow. Bull. Amer. Meteor. Soc., 96, 1719–1741. doi: http://dx.doi.org/10.1175/BAMS-D-13-00262.1

Mechem, D. B., Giangrande, S. E., Wittman, C. S., Borque, P., Toto, T. and Kollias, P. (2015), Insights from modeling and observational evaluation of a precipitating continental cumulus event observed during the MC3E field campaign. J. Geophys. Res. Atmos., 120, 1980–1995. doi: 10.1002/2014JD022255.

Gledhill, D.K., M.M. White, J. Salisbury, H. Thomas, I. Mlsna, M. Liebman, B. Mook, J. Grear, A.C. Candelmo, R.C. Chambers, C.J. Gobler, C.W. Hunt, A.L. King, N.N. Price, S.R. Signorini, E. Stancioff, C. Stymiest, R.A. Wahle, J.D. Waller, N.D. Rebuck, Z.A. Wang, T.L. Capson, J.R. Morrison, S.R. Cooley, and S.C. Doney. (2015). Ocean and coastal acidification off New England and Nova Scotia. Oceanography 28(2), 182–197, http://dx.doi.org/10.5670/oceanog.2015.41

Feng, S., Li, Z., Liu, Y., Lin, W., Zhang, M., Toto, T., … & Endo, S. (2015). Development of fine‐resolution analyses and expanded large‐scale forcing properties: 2. Scale awareness and application to single‐column model experiments. Journal of Geophysical Research: Atmospheres.

Michael J McCann and Dianna K Padilla 2015. Effects of a patchy food environment across life history stages. Journal of Experimental Marine Biology and Ecology 472: 135-141.

Alexander Y. Karatayev, Demetrio Boltovskoy, Lyubov Burlakova and Dianna K. Padilla 2015. Parallels and contrasts between Limnoperna fortunei and species of Dreissena. In: Limnoperna fortunei: the ecology, distribution and control of a swiftly spreading invasive fouling mussel, Demetrio Boltovskoy, Editor. Springer.

Alexander Y. Karatayev, Lyubov E. Burlakova, Sergey E. Mastitsky, and Dianna K. Padilla 2015. Predicting the spread of aquatic invaders: insight from 200 years of invasion by zebra mussels. Ecological Applications 25: 430-440.

Alexander Y. Karatayev, Lyubov E. Burlakova and Dianna K. Padilla. 2015. Zebra versus quagga mussels: a review of their spread, population dynamics, and ecosystem impacts. Hydrobiologia 746: 97-112.

Chapman, D. D., Feldheim, K. A., Papastamatiou, Y. P., & Hueter, R. E. (2015). There and Back Again: A Review of Residency and Return Migrations in Sharks, with Implications for Population Structure and Management. Annual review of marine science, 7, 547-570.

Ashe, J. L., Feldheim, K. A., Fields, A. T., Reyier, E. A., Brooks, E. J., O’Connell, M. T., … & Chapman, D. D. (2015). Local population structure and context-dependent isolation by distance in a large coastal shark. Mar Ecol Prog Ser, 520, 203-216.

Watanabe, Y. Y., Goldman, K. J., Caselle, J. E., Chapman, D. D., & Papastamatiou, Y. P. (2015). Comparative analyses of animal-tracking data reveal ecological significance of endothermy in fishes. Proceedings of the National Academy of Sciences, 201500316.

Brooks, E. J., Brooks, A. M., Williams, S., Jordan, L. K., Abercrombie, D., Chapman, D. D., … & Grubbs, R. D. (2015). First description of deep-water elasmobranch assemblages in the Exuma Sound, The Bahamas. Deep Sea Research Part II: Topical Studies in Oceanography, 115, 81-91.

Fields, A. T., Feldheim, K. A., Poulakis, G. R., & Chapman, D. D. (2015). Facultative parthenogenesis in a critically endangered wild vertebrate. Current Biology, 25(11), R446-R447.

Tettelbach, S. T., B. J. Peterson, J. M. Carroll, B. T. Furman, S. W. T. Hughes, J. Havelin, J. R. Europe, D. M. Bonal, A. J. Weinstock and C. F. Smith. 2015. Aspiring to an Alternative Stable State: Rebuilding of Bay Scallop Populations and Fisheries Following Intensive Restoration. Marine Ecology Progress Series 529: 121-136.

Berry, D. L., J. A. Goleski, F. Koch, C. C. Wall, B. J. Peterson, O. R. Anderson and C. J. Gobler. 2015. Shifts in Cyanobacterial Strain Dominance during Onset of Harmful Algal Blooms in Florida Bay, USA. Molecular Ecology 70: 361-371.

Furman, B. T., L. J. Jackson, E. Bricker and B. J. Peterson. 2015. Sexual recruitment in Zostera marina: a patch to landscape-scale investigation. Limnology and Oceanography 60(2): 584-599.

Carroll, J. M., L. L. Jackson and B. J. Peterson. 2015. The effect of increasing habitat complexity on bay scallop survival in the presence of different decapod crustacean predators. Estuaries and Coasts 38: 1569-1579

Stubler, A. D., A. R. Duckworth and B. J. Peterson. 2015. Sedimentation affects sponge abundance, diversity and distribution on Jamaican coral reefs. Marine Pollution Bulletin 96: 261-270.

Stubler, A. D., B. T. Furman and B. J. Peterson. 2015. Sponge erosion under acidification and warming scenarios: differential impacts on living and dead coral. Global Change Biology 21(11): 4006-4020.

Furman, B. T. and B. J. Peterson. 2015. Sexual Recruitment in Zostera marina: Progress toward a Predictive Model. PLoS ONE 10(9): e0138206.

Trathan, P. N., P. García-Borboroglu, D. Boersma, C.-A. Bost, R. J. M. Crawford, G. T. Crossin, R. J. Cuthbert, P. Dann, L. S. Davis, S. De la Puente, U. Ellenberg, H.J. Lynch, T. Mattern, K. Pütz, P. J. Seddon, W. Trivelpiece, B. Wienecke. 2015. Assessing human impacts on marine systems, especially upon penguin species: how much do we care? Conservation Biology 29(1): 31-41.

Casanovas, P.V., R. Naveen, S. Forrest, J. Poncet, and H.J. Lynch. 2015. A comprehensive coastal seabird survey maps out the front lines of ecological change on the Western Antarctic Peninsula. Polar Biology 38: 927-940.

LaRue, M., G. Kooyman, H.J. Lynch, and P. Fretwell. 2015. Emigration in emperor penguins: Implications for interpretation of long-term studies. Ecography 38: 114-120.

Zhou, X., P. Kollias and E. Lewis, (2015), Clouds, Precipitation, and Marine Boundary Layer Structure during the MAGIC Field Campaign. J. Climate, 28, 2420–2442. doi: http://dx.doi.org/10.1175/JCLI-D-14-00320.1

Zermeno, D., C. Zhang, P. Kollias and H. Kalesse, (2015), Shallow Cloud Moistening in MJO and non-MJO Large-Scale Convective Events over the ARM Manus Site. J. Atmos. Sciences, doi: http://dx.doi.org/10.1175/JAS-D-14-0322.1

Lamer, K., P. Kollias, and L. Nuijens (2015), Observations of the variability of shallow trade wind cumulus cloudiness and mass flux. J. Geophys. Res. Atmos., 120, 6161–6178. doi: 10.1002/2014JD022950.

Marcus van Lier-Walqui, Ann Fridlind, Andrew Ackerman, Scott Collis, Jonathan Helmus, Donald MacGorman Kirk North, Pavlos Kollias and Derek Posselt, (2015), Polarimetric radar signatures of deep convection: characteristics of KDP columns observed during MC3E. Monthly Weather Review 2015; e-View doi: 10.1175/MWR-D-15-0100.1

Jiwen Fan, Yi-Chin Liu, Kuan-Man Xu, Kirk North, Scott Collis, Xiquan Dong, Guang J. Zhang, Qian Chen, Kollias Pavlos, and Steven J. Ghan, (2015), Improving Representation of Convective Transport for Scale-Aware Parameterization – Part I: Convection and Cloud Properties Simulated with Spectral-Bin and Bulk Microphysics. Accepted, Journal of Geophysical Research – Atmospheres

Kneifel, S., A.von Lerber, J. Tiira, D. Moisseev, P. Kollias, and J. Leinonen (2015), Observed relations between snowfall microphysics and triple-frequency radar measurements. J. Geophys. Res. Atmos., 120, 6034–6055. doi:10.1002/2015JD023156.

Jensen, M., et al., (2015), The Midlatitude Continental Convective Clouds Experiment (MC3E). Accepted to the Bulletin of the American Meteorological Society

Gownaris NJ, Pikitch EK, Ojwang WO, Michener R, Kaufman L (2015) Predicting Species’ Vulnerability in a Massively Perturbed System: The Fishes of Lake Turkana, Kenya. PLoS ONE 10(5): e0127027. doi:10.1371/journal.pone.0127027

Lin, W., Liu, Y., Vogelmann, A. M., Fridlind, A., Endo, S., Song, H., … & Zhang, M. (2015). RACORO Continental Boundary Layer Cloud Investigations. Part III: Separation of Parameterization Biases in Single‐Column Model CAM5 Simulations of Shallow Cumulus. Journal of Geophysical Research: Atmospheres.

Price, R. E., LaRowe, D. E., Italiano, F., Savov, I., Pichler, T., & Amend, J. P. (2015). Subsurface hydrothermal processes and the bioenergetics of chemolithoautotrophy at the shallow-sea vents off Panarea Island (Italy). Chemical Geology, 407, 21-45.

Engel, B.E; Hallock, P; Price, R.E.; and Pichler, T. (2015). Shell dissolution in larger benthic foraminifers exposed to pH and temperature extremes: Results from an in situ experiment. Journal of Foraminiferal Research. 45 (2).

Dasgupta, S., Huang, I.J., and McElroy A. E. 2015. Hypoxia enhances the toxicity of Corexit EC9500A and CEWAFs prepared with Louisiana Sweet Crude Oil (MD-242) to sheepshead minnow (Cyprinodon variegatus) larvae. PLoS One. DOI:10.1371/journal.pone.0128939.

Romany, J.S., McElroy A.E., and Fast, M. 2015. Measures of immune system status in young-of-the-year winter flounder (Pseudopleuronectes americanus) from Long Island coastal bays. J. Fish. Biol. 86:148-161.

K. Park*, L. K. Emmons, Z. Wang and J. E. Mak, Joint Application of Concentration and δ18O to Investigate the Global Atmospheric CO Budget, Atmosphere, 6, 547-578; doi:10.3390/atmos6050547, 2015.

K. Park*, Z. Wang, L. K. Emmons, J. E. Mak, Variation of atmospheric CO, δ13C and δ18O at high northern latitude during 2004-2009: observations and model simulations, J. Geophys.Res.-Atmos., 120, 11,024–11,036, doi:10.1002/2015JD023191, 2015.

P.K. Misztal et al., inc. J.E. Mak, Atmospheric benzenoid emissions from plants rival those from fossil fuel, Nature Sci. Rep., 5, 12064, 2015.

L. Su*, E. G. Patton, J. Vilà-Guerau de Arellano, A. B. Guenther, L. Kaser, B. Yuan, F. Xiong, P. B. Shepson, L. Zhang, D. O. Miller, W. H. Brune, K. Baumann, E. Edgerton, A. Weinheimer, and J. E. Mak, Understanding isoprene photo-oxidation using observations and modeling over a subtropical forest in the Southeast US, Atmos. Chem. Phys. Discuss., 15, 31621-31663, doi:10.5194/acpd-15-31621-2015, 2015.

Thalman, R., Baeza-Romero, M. T., Ball, S. M., Borrás, E., Daniels, M. J. S., Goodall, I. C. A., Henry, S. B., Karl, T., Keutsch, F. N., Kim, S., Mak, J., Monks, P. S., Muñoz, A., Orlando, J., Peppe, S., Rickard, A. R., Ródenas, M., Sánchez, P., Seco, R., Su, L., Tyndall, G., Vázquez, M., Vera, T., Waxman, E., and Volkamer, R.: Instrument intercomparison of glyoxal, methyl glyoxal and NO2 under simulated atmospheric conditions, Atmos. Meas. Tech., 8, 1835-1862, doi:10.5194/amt-8-1835-2015, 2015.

Yoo, C., S. Park, D. Kim, J. H. Yoon, and H. M. Kim, 2015: Boreal winter MJO teleconnection in the Community Atmosphere Model version 5 with the Unified Convection parameterization, J. Climate, 28, 8135-8150

Thorne, L. H., E. L. Hazen, S.J. Bograd, D.G. Foley, M.G. Conners, M.A. Kappes, H. M. Kim, Y. Tremblay, D.P. Costa, and S.A. Shaffer, 2015: Foraging behavior links climate variability and reproduction in North Pacific albatrosses, Movement Ecology, 3:27, DOI: 10.1186/s40462-015-0050-9

Yu, J. 2015 Erratum for “Approximations of the Dispersion Relationship of Water Waves” by J. Yu. J. Eng. Mech., 141(7) . doi: 10.1061/(ASCE)EM.1943-7889.0000941

Yu, J. and Chen, S. 2015 Hydrodynamic instability mechanism for rip currents. Studies in Applied Mathematics. 135: 196-223. doi: 10.1111/sapm.12074

Weidman, P., Herczynski, A., Yu, J. and Howard, L. N. 2015 Experiments on normal modes in a tank with corrugated bottom. J. Fluid Mech., 777: 122-150. doi:10.1017/jfm.2015.318

Carlisle AB, Goldman KJ, Litvin SY, Madigan DJ, Bigman JS, Swithenbank AM, Kline Jr TC & BA Block. 2015. Stable isotope analysis of salmon shark vertebrae reveals ontogenetic changes in habitat in a pelagic shark. Proceedings Royal Society B 282: 20141446.

Madigan DJ. 2015. Understanding bluefin migration using intrinsic tracers in tissues in T. Kitagawa & S. Kimura (Eds.), Biology & Ecology of Bluefin Tuna. Boca Raton, FL: CRC Press.

Carlisle AB, Litvin SY, Hazen EL, Madigan DJ, Goldman KJ, Lea RN & BA Block. 2015. Reconstructing habitat use by juvenile salmon sharks links upwelling to strandings in the California Current. Marine Ecology Progress Series 525: 217-228.

Lyons K, Preti A, Madigan DJ, Wells RJD, Blasius ME, Snodgrass OE, Kacev D, Harris JD, Dewar H, Kohin S, MacKenzie K & CG Lowe. 2015. Insights into the life history and ecology of a large shortfin mako shark (Isurus oxyrinchus) captured in southern California. Journal of Fish Biology. DOI:10.1111/jfb.12709.

Madigan DJ, Brooks EJ, Bond ME, Gelsleichter J, Howey LA, Abercrombie DL, Brooks A & DD Chapman. 2015. Diet shift and associated site-fidelity of oceanic whitetip sharks (Carcharhinus longimanus) along the edge of the Great Bahama Bank. Marine Ecology Progress Series 529: 185-197. DOI: 10.3354/meps11302.

Madigan DJ, Carlisle AB, Gardner LD, Jayasundara N, Micheli F, Schaefer KM, Fuller DW & BA Block. 2015. Assessing niche width of endothermic fish from genes to ecosystem. PNAS 112(27): 8350-8355.

Harris, C.M., K. Lorenz, L.D.C. Fishpool, B. Lascelles, J. Cooper, N. Coria, J.P. Croxall, L.M. Emmerson, R. Fijn, P. Jouventin, M.A. LaRue, Y. Le Maho, H.J. Lynch, R. Naveen, S. Poncet, R.A. Phillips, C.J. Southwell, J.A. van Franeker, H. Weimerskirch, B. Wienecke, and E.J. Woehler. 2015. Important Bird Areas in Antarctica Summary 2015. BirdLife International and Environmental Research & Assessment Ltd., Cambridge.

Rona, P., V. Guida, M.I. Scranton, D. Gong, L. Macelloni, M. Pierdomenico, A. Diercks, V. Asper, and S. Haag. 2015. Hudson submarine canyon head offshore New York and New Jersey: A physical and geochemical investigation of a fertile habitat space. Deep-Sea Research II, 121, 213-232. http://dx.doi.org/10.1016/j/dsr2.2015.07.019

Pierdomenico, M., V.G. Guida, L. Macelloni, F.L. Chiocci, P.A. Rona, M.I. Scranton, V. Asper and A. Diercks. 2015. Sedimentary facies, geomorphic features and habitat distribution at the Hudson Canyon head from AUV multibeam data. Deep-Sea Research II, 121, 112-125. http://dx.doi.org/10.1016/j.dsr2.2015.04.016.

Rodriguez-Mora, M, M.I. Scranton, G.T. Taylor, and A.Y. Chistoserdov. 2015. The dynamics of the bacterial diversity in the redox transition and anoxic zones of the Cariaco Basin assessed by parallel tag sequencing. FEMS Microbiology Ecology, 91(9), fiv088. doi:10.1093/femsec/fiv088.

Pershing, A. J., M. A. Alexander, C. M. Hernandez, L. A. Kerr, A. Le Bris, K. E. Mills, J. A. Nye, N. R. Record, H. A. Scannell, J. D. Scott, G. D. Sherwood, A. C. Thomas. (2015) Slow adaptation in the face of rapid warming leads to the collapse of an iconic fishery. Science 350 (6262): 809-812.

Tommasi, D., J.A. Nye, C. Stock, J. Hare, M. Alexander, K. Drew (2015) Effect of environmental conditions on river herring freshwater survival: a coastwide perspective. Canadian Journal of Fisheries and Aquatic Sciences 72(7): 1037-1047.

Levinton, J., Lord, S., Higeshide. 2015, Are crabs stressed for water on a hot sand flat? Water loss and field water state of two species of intertidal fiddler crabs. J. Exp. Mar. Biol. Ecol. 469: 57-62.

Sebastiano, D., Levinton, J., Doall, M., Kamath, S. 2015, Using a shellfish harvest strategy to extract high nitrogen inputs in coastal bays: Practical and economic implications. Journal of Shellfish Research, 34: 573-583.

Gillett, David, J., Stephan B. Weisberg, Treda Grayson, Anna Hamilton, Virginia Hansen, Erik W. Leppo, Marguerite C. Pelletier, Angel Borja, Donald Cadien, Daniel Dauer, Robert Diaz, Margaret Dutch, Jeffery L. Hyland, Michael Kellog, Peter Larsen, Jeffrey Levinton, Roberto Llansó, Lawrence L. Lovel, Paul Montagna, Dean Pasko, Charles A. Phillips, Chet Rakocinski, J. Ananda Ranasinghe, Denise M. Sanger, Heliana Teixeira, Robert F. Van Dolah, Ronald G. Velarde, and Kathy I. Welch. 2015, Effect of ecological group classification schemes on performance of the AMBI benthic index in US coastal waters Ecological Indicators, 50: 99-107.

Cahill, A. E. and Levinton, J. S. 2015, Genetic differentiation and reduced genetic diversity at the northern range edge of two species with different dispersal modes. Mol Ecol. Accepted Author Manuscript. doi:10.1111/mec.13497

Vogelmann, A. M., Fridlind, A. M., Toto, T., Endo, S., Lin, W., Wang, J., … Zhang, MH & Khairoutdinov, M. (2015). RACORO Continental Boundary Layer Cloud Investigations. Part I: Case Study Development and Ensemble Large‐Scale Forcings. Journal of Geophysical Research: Atmospheres.

Alfaro, D. A., & Khairoutdinov, M. (2015). Thermodynamic constraints on the morphology of simulated midlatitude squall lines. Journal of the Atmospheric Sciences, (2015).

Liu, P., Zhang, Q., Zhang, C., Zhu, Y., Khairoutdinov, M., Kim, H. M., … & Zhang, M. (2015). A Revised Real-Time Multivariate MJO Index. Monthly Weather Review, (2015).

Dheilly NM, Duval D, Mouahid G, Emans R, Allienne J-F, Genthon C, Dubois E, Du Pasquier L, Adema C, Grunau C, Mitta G, and Gourbal B. (2015). Diverse Immunoglobulin-like domain containing lectins in the snail Biomphalaria glabrata. Journal of Developmental and Comparative Immunology 48(1): 234-243

Dheilly NM, Maure F, Ravallec M, Galinier R, Doyon J, Duval D, Leger L, Volkoff A-N, Misse D, Nidelet S, Demolomb V, Brodeur J, Gourbal B, Thomas F, Mitta G. (2015). Who is the puppet master? Replication of a parasitic wasp-associated virus correlates with host behavior manipulation. Proceedings of the Royal Society B Biological Sciences 282(1803) http://rspb.royalsocietypublishing.org/content/282/1803/20142773

Harke, M. J., Davis, T. W., Watson, S. B., & Gobler, C. J. (2015). Nutrient-controlled niche differentiation of western Lake Erie cyanobacterial populations revealed via metatranscriptomic surveys. Environmental science & technology.

Rachel E O’Brien, Bingbing Wang, Alexander Laskin, Nicole Riemer, Matthew West, Qi Zhang, Yele Sun, Xiao‐Ying Yu, Peter Alpert, Daniel A Knopf, Mary K Gilles, Ryan C Moffet (2015). Chemical imaging of ambient aerosol particles: Observational constraints on mixing state parameterization. Journal of Geophysical Research: Atmospheres, 120(18), 9591-9605.

Andrea M. Arangio, Jonathan H. Slade, Thomas Berkemeier, Ulrich Pöschl, Daniel A. Knopf, Manabu Shiraiwa (2015). Multiphase Chemical Kinetics of OH Radical Uptake by Molecular Organic Markers of Biomass Burning Aerosols: Humidity and Temperature Dependence, Surface Reaction, and Bulk Diffusion, J. Phys. Chem. A, 119, 4533−4544.

Sessa, J. A., E. Larina, K. Knoll, M. Garb, J. K. Cochran, B. T. Huber, K. G. MacLeod, and N. H. Landman (2015) Ammonite habitat revealed via isotopic composition and comparisons with co-occurring benthic and planktonic organisms. Proceedings Nat. Acad. Sci. DOI 10.1073/pnas.1507554112.

Landman, N. H., J. C. Grier, J. W. Grier, J. K. Cochran, and S. M. Klofak (2015) 3-D orientation and distribution of ammonites in a concretion from the Upper Cretaceous Pierre Shale of Montana. Swiss J Palaeontol. DOI 10.1007/s13358-015-0084-z.

Cochran, J. K., N. H. Landman, N. L. Larson, K. C. Meehan, M. Garb, and J. Brezina (2015) Geochemical evidence (C and Sr isotopes) for methane seeps as ammonite habitats in the Late Cretaceous (Campanian) Western Interior Seaway. Swiss J Palaeontol. DOI 10.1007/s13358-015-0087-9.

Lamer, K., and P. Kollias (2015), Observations of fair-weather cumuli over land: Dynamical factors controlling cloud size and cover, Geophys. Res. Lett., 42, 8693–8701, doi:10.1002/2015GL064534

Lipton D., Lew D.K., Wallmo K., Wiley P.C., and Dvarskas A. (2015) The evolution of non-market valuation of U.S. Coastal and Marine Resources. Journal of Ocean and Coastal Economics. Article 6. Available at: http://cbe.miis.edu/joce/vol2014/iss1/6/.

Qian, Y., Feng, H., Gallagher, F. J., Zhu, Q., Wu, M., Liu, C.J., Jones, K.W., and Tappero, R.V. (2015). Synchrotron study of metal localozation in Typha latifolia L. root sections. Journal of Synchrotron Radiation. 22: 1459-1468.

Han J, McBean C, Wang L, Hoy J, Jaye C, Liu H, Li Z-Q, Sfeir M, Fischer D, Taylor G, Misewich J, Wong SS. 2015. Probing structure-induced optical behavior in a new class of self-activated luminescent 0D/1D CaWO4 metal oxide – CdSe nanocrystal composite heterostructures. Chem Materials 27: 778−792.

McParland, E, Benitez-Nelson CR, Taylor GT, Rollings A, Lorenzoni L. 2015. Cycling of suspended particulate phosphorus across the redoxcline of the Cariaco Basin. Mar. Chem. 176: 64-74.

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Maloney, E. D., Colle, B. C. and Coauthors, 2014: North American Climate in CMIP5 Experiments: Part III: Assessment of Twenty-First-Century Projections*. J. Climate, 27, 2230-2270. doi: http://dx.doi.org/10.1175/JCLI-D-13-00273.1.

Hodrefe, C, P. Doraiswamy, B. Colle, K. Demerjian, W. Hao, M. Erickson, M. Souders, and J-Y Ku, 2014: Meteorology, Emissions, and Grid Resolution: Effects on Discrete and Probabilistic Model Performance. In: D. Steyn, P. Builtjes, R. Timmermans (eds.): Air Pollution and Modeling and Its Application XXII, NARA Science for Peace and Security Series C: Environmental Security, 493-497. Springer Netherlands.

Wuebbles, D., Meehl, G., Hayhoe, K., Karl, T. R., Kunkel, K., Santer, B., Colle, B. C., … & Sun, L. 2014: CMIP5 climate model analyses: Climate extremes in the United States. Bulletin of the American Meteorological Society, 95(4), 571-583.

Colle, B. A., Stark, D. and Yuter, S.E. 2014: Surface Microphysical Observations within East Coast Winter Storms on Long Island, New York. Mon. Wea. Rev., 142, 3126-3146. doi: http://dx.doi.org/10.1175/MWR-D-14-00035.1

Wilson, R. E., Bratton, S. D., Wang, J., & Colle, B. A. 2014: Evidence for Directional Wind Response in Controlling Inter-annual Variations in Duration and Areal Extent of Summertime Hypoxia in Western Long Island Sound. Estuaries and Coasts, 1-9.

Picca, J.C., D.M. Schultz, B. A. Colle, S. Ganetis, D.R. Novak, and M. Sienkiewicz, 2014: The value of dual-polarization radar in diagnosing the complex microphysical evolution of an intense snowband. Bull. Meteor. Soc., 95, 1825-1834.

Li, H., and B.A. Colle, 2014: Multidecadal changes in the frequency and ambient conditions of warm season convective storms over the northeastern U.S. J. Climate, 27, 7285-7300.

Colle, B.A. 2014: Cold Air Damming. In: Gerald R. North (editor-in-chief), John Pyle and Fuqing Zhang (editors). Encyclopedia of Atmospheric Sciences, 2nd edition, Vol 4, pp. 62–68.

Rountos, K.J., Tang, Y.Z., Cerrato, R.M., Gobler, C.J., Pikitch, E.K. (2014). Toxicity of the harmful dinoflagellate Cochlodinium polykrikoides to early life stages of three estuarine forage fish. Mar Ecol Prog Ser 505: 81-94

McCauley, M. M., Cerrato, R. M., Sclafani, M., & Frisk, M. G. (2014). Diel Behavior in White Perch Revealed using Acoustic Telemetry. Transactions of the American Fisheries Society, 143(5): 1330-1340.

McNamara, M.E., D.J. Lonsdale, and R.M. Cerrato (2014). Role of eutrophication in structuring planktonic communities in the presence of the ctenophore Mnemiopsis leidyi. Mar. Ecol. Prog. Ser. 510: 151-165

Collier, J.L., S.P. Fitzgerald, L.A. Hice, M.G. Frisk, and A.E. McElroy (2014) A New PCR-Based Method Shows That Blue Crabs (Callinectes sapidus (Rathbun)) Consume Winter Flounder (Pseudopleuronectes americanus (Walbaum)). Plos One 9.

Sagarese, S.R., M.G. Frisk, T.J. Miller, K.A. Sosebee, J.A. Musick, and P.J. Rago (2014) Influence of environmental, spatial, and ontogenetic variables on habitat selection and management of spiny dogfish in the Northeast (US) shelf large marine ecosystem. Canadian Journal of Fisheries and Aquatic Sciences 71(4), 567-580.

Skyler R. Sagarese, Michael G. Frisk, Robert M. Cerrato, Kathy A. Sosebee, John A. Musick, and Paul J. Rago (2014). Application of generalized additive models to examine ontogenetic and seasonal distributions of spiny dogfish (Squalus acanthias) in the Northeast (US) shelf large marine ecosystem. Can J. Fish. Aq. Sci. 71: 847-877.

Pycke, B. F., Roll, I. B., Brownawell, B. J., Kinney, C. A., Furlong, E. T., Kolpin, D. W., & Halden, R. U. (2014). Transformation Products and Human Metabolites of Triclocarban and Triclosan in Sewage Sludge Across the United States. Environmental science & technology, 48(14), 7881-7890.

Lara-Martín, P. A., González-Mazo, E., Petrovic, M., Barceló, D., & Brownawell, B. J. (2014). Occurrence, distribution and partitioning of nonionic surfactants and pharmaceuticals in the urbanized Long Island Sound Estuary (NY). Marine pollution bulletin.

Traverso-Soto, J. M., Brownawell, B. J., González-Mazo, E., & Lara-Martín, P. A. (2014). Partitioning of alcohol ethoxylates and polyethylene glycols in the marine environment: Field samplings vs laboratory experiments. Science of the Total Environment, 490, 671-678.

Yuan, W., Geller, M. A. and Love, P. T. (2014), ENSO influence on QBO modulations of the tropical tropopause. Q.J.R. Meteorol. Soc., 140: 1670-1676. doi: 10.1002/qj.2247

Frisk, M.G., Jordaan, A., Miller, T.J. (2014) Moving beyond the current paradigm in marine population connectivity: are adults the missing link? Fish and Fisheries 15, 242-254.

Sheffield, J., et al. (including E.K.M. Chang), 2014: Regional Climate Processes and Projections for North America: CMIP3/CMIP5 differences, attribution and outstanding issues. NOAA Technical Report OAR CPO-2. Available at http://docs.lib.noaa.gov/noaa_documents/OAR/CPO/TR_OAR_CPO/CPO-2.pdf.

Maloney, E.D., S.J. Camargo, E. Chang, et al., 2014: North American climate in CMIP5 experiments: Part III: Assessment of twenty-first-century projections, J. Climate, 27, 2230-2270, doi: 10.1175/JCLI-D-13-00273.1.

Feng, J., Liu, P., Chen, W., & Wang, X. (2014). Contrasting Madden–Julian Oscillation activity during various stages of EP and CP El Niños. Atmospheric Science Letters.

Liu, P. (2014). MJO structure associated with the higher-order CEOF modes. Climate Dynamics, 1-12.

Bluestein, Howard B., J. B. Houser, M. M. French, J. C. Snyder, G. D. Emmitt, I. PopStefanija, C. A. Baldi, and R. T. Bluth, (2014). Observations of the boundary layer near tornadoes and in supercells using a mobile, co-located, pulsed Doppler lidar and radar. J. Atmos. Oceanic Technol., 31, 302-325.

French, Michael M., H. B. Bluestein, I. PopStefanija, C. A. Baldi, and R. T. Bluth, (2014). Mobile, phased-array, Doppler radar observations of tornadoes at X band. Mon. Wea. Rev., 142, 1010-1036.

Skinner, Patrick S., C. C. Weiss, M. M. French, H. B. Bluestein, P. M. Markowski, and Y. P. Richardson, (2014). VORTEX2 observations of a low-level mesocyclone with multiple internal rear-flank downdraft momentum surges in the 18 May 2010 Dumas, Texas supercell. Mon. Wea. Rev., 142, 2935-2960.

Dietrich, D. E., Bowman, M. J., Korotenko, K. A., & Bowman, M. H. E. (2014). Oil Spill Risk Management: Modeling Gulf of Mexico Circulation and Oil Dispersal. John Wiley & Sons.

Garcia-Orellana, J., Cochran, J. K., Bokuniewicz, H., Daniel, J. W. R., Rodellas, V., & Heilbrun, C. (2014). Evaluation of 224Ra as a tracer for submarine groundwater discharge in Long Island Sound (NY). Geochimica et Cosmochimica Acta 114, 314-330.

Koch, F., Burson, A., Tang, Y. Z., Collier, J. L., Fisher, N. S., Sañudo-Wilhelmy, S., & Gobler, C. J. (2014). Alteration of plankton communities and biogeochemical cycles by harmful Cochlodinium polykrikoides (Dinophyceae) blooms. Harmful Algae, 33(0), 41-54. doi: http://dx.doi.org/10.1016/j.hal.2014.01.003

Souders, M. B., Colle, B. A., & Chang, E. K. 2014: The Climatology and Characteristics of Rossby Wave Packets Using a Feature-Based Tracking Technique. Monthly Weather Review, 142(10), 3528-3548.

Souders, M.B., B.A. Colle, and E.K.M. Chang, 2014: A description of an automated approach for feature-based tracking of Rossby wave packets. Mon. Wea. Rev., 142, 3505-3527, doi:10.1175/MWR-D-1300317.1.

Chang, E.K.M., 2014: Impacts of background field removal on CMIP5 projected changes in Pacific winter cyclone activity, J. Geophys. Res. Atmos., 119, 4626-4639, doi:10.1002/2013JD020746.

Xia, X.*, and E.K.M. Chang, 2014: Diabatic damping of zonal index variations, J. Atmos. Sci., 71, 3090-3105, doi:10.1175/JAS-D-13-0292.1.

Doherty, O. M., Riemer, N., & Hameed, S. (2014). Role of the convergence zone over West Africa in controlling Saharan mineral dust load and transport in the boreal summer. Tellus B, 66.

Wallace, R. B., Baumann, H., Grear, J. S., Aller, R. C., & Gobler, C. J. (2014). Coastal ocean acidification: The other eutrophication problem. Estuarine, Coastal and Shelf Science.

del Castillo C, Allam B. (2014). A comparative genomics analysis of the T3SS2α pathogenicity island of Vibrio parahaemolyticus. Journal of Shellfish Research 33(2): 550

Wang K, Pales Espinosa E, Allam B. (2014). Effect of “heat shock” treatments on QPX disease in the hard clam, Mercenaria mercenaria. Journal of Shellfish Research 33(2): 661.

Wang K, Del Castillo C, Pales Espinosa E, Allam B. (2014). Clam focal and systemic immune responses to QPX revealed by RNA-Seq technology. Journal of Shellfish Research 33(2): 661.

Rubin E, Pales Espinosa E, Koller A, Allam B. (2014). Extracellular proteins in quahog parasite unknown (QPX) mucoid secretion. Journal of Shellfish Research 33(2): 648.

Rubin E, Tanguy A, Pales Espinosa E, Allam B. (2014). Differential gene expression in quahog parasite unknown (QPX) in response to clam factors and transcriptomic profiling of five QPX isolates. Journal of Shellfish Research 33(2): 647-648.

Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, et al. (2014). The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. PLoS Biology, 12(6), e1001889.

Rosa M, Ward E, Shumway S, Wikfors G, Pales Espinosa E, Allam B. (2014). Examining seasonal shifts in retention efficiency and mucosal composition in the blue mussel Mytilus edulis. Journal of Shellfish Research 33(2): 647.

Allam B., Corre E, Pales Espinosa E. (2014). Pallial mucus of Crassostrea virginica regulates the expression of putative virulence genes of its pathogen Perkinsus marinus. Journal of Shellfish Research 33(2): 586.

Allam, B., Pales Espinosa, E., Tanguy, A., Jeffroy, F., Le Bris, C., Paillard, C. 2014. Transcriptional changes in manila clam (Ruditapes philippinarum) in response to brown ring disease. Fish and Shellfish immunology. 41, 2-11.

Rubin E, Tanguy A, Perrigault M, Pales Espinosa E, Allam B. (2014). Characterization of the transcriptome and temperature-induced differential gene expression of in quahog parasite unknown QPX, the thraustochytrid parasite of hard clams. BMC Genomics 15: 245.

Pales Espinosa E, Koller T, Allam B. (2014). Shotgun proteomic characterization of the pallial mucus of the oyster Crassostrea virginica. Journal of Shellfish Research 33(2): 640.

Dahl S, Barnes D, Allam B. (2014). QPX disease relationships with environmental parameters monitored over a decade in a Raritan Bay (NY) hard clam fishery. Journal of Shellfish Research 33(2): 599-600.

Pales Espinosa E., Allam B. (2014). Food quality and season affect the expression of the mucosal lectin MeML and food sorting abilities in the blue mussel Mytilus edulis. Journal of Shellfish Research 33(2): 639-640.

Pales Espinosa E., Corre E, Allam B. (2014). Pallial mucus of Crassostrea virginica regulates the expression of putative virulence genes of its pathogen Perkinsus marinus. International Journal for Parasitology 44: 305-317.

Beaupré, S. R. (2014). Chapter 6: The isotopic composition of marine DOC, in Biogeochemistry of Marine Dissolved Organic Carbon, 2nd Edition, edited by D. A. Hansell and C. A. Carlson, pp. 335-368, Academic Press, U.K.

Geers, T.M., E.K. Pikitch, M.G. Frisk (In Press-online February 5, 2014). An Original Model of the Northern Gulf of Mexico using Ecopath with Ecosim and its Implications for the Effects of Fishing on Ecosystem Structure and Maturity. Deep Sea Research Part II: Topical Studies in Oceanography.

Newman, E. T. Biography of a Hacienda: Work and Revolution in Rural Mexico. 2014 University of Arizona Press.

Newman, E. T. Biography of a Hacienda: Work and Revolution in Rural Mexico. 2014 University of Arizona Press.

Dietrich, D. E., Bowman, M. J., Korotenko, K. A., & Bowman, M. H. E. The 2010 Deep Water Horizon and 2002 Supertanker Prestige Accidents. Oil Spill Risk Management: Modeling Gulf of Mexico Circulation and Oil Dispersal, 1-8.

Dietrich, D. E., Bowman, M. J., Korotenko, K. A., & Bowman, M. H. E. The 2010 Deep Water Horizon and 2002 Supertanker Prestige Accidents. Oil Spill Risk Management: Modeling Gulf of Mexico Circulation and Oil Dispersal, 1-8.

Berg, L. K., J. D. Fast, J. C. Barnard, S. P. Burton, B. Cairns, D. Chand, J. M. Comstock, S. Dunagan, R. A. Ferrare, C. J. Flynn, J. W. Hair., C. A. Hostetler., J. Hubbe., R. Johnson, E. I. Kassianov, C. D. Kluzek, P. Kollias, K. Lamer, F. Mei, M. A. Miller, J. Michalsky, I. Ortega, R R. Rogers., P. B. Russell, J. Redemann, A. J. Sedlacek III, M. Segal-Rosenheimer, B. Schmid, J. E. Shilling, Y. Shinozuka, S. R. Springston, J. Tomlinson, M. Tyrrell, J. M. Wilson, R. Volkamer, A. Zelenyuk, and C. M. Berkowitz, (2013), The Two-Column Aerosol Project: Phase I Overview and Impact of Elevated Aerosol Layers on Aerosol Optical Depth, Accepted to the Journal of Geophysical Research

Taylor, D. (2013). The Log from the Sea of Cortez: A Poem Series. San Antonio, TX: Wings Press.

Taylor, D. (2013). The Log from the Sea of Cortez: A Poem Series. San Antonio, TX: Wings Press.

Archer, C. L., Colle, B. C., Monache, L., Dvorak, M. J., Lundquist, J., Bailey, B. H., … & Zack, J. 2013: Meteorology for coastal/offshore wind energy in the United States: recommendations and research needs for the next 10 years. Bulletin of the American Meteorological Society.

Okubo, A., & Levin, S. A. (2013). Diffusion and ecological problems: modern perspectives (Vol. 14). Springer Science & Business Media.

Okubo, A., & Levin, S. A. (2013). Diffusion and ecological problems: modern perspectives (Vol. 14). Springer Science & Business Media.

Aerts, J., Botzen, W., Bowman, M., Dircke, P. and Ward, P., 2013. Climate adaptation and flood risk in coastal cities. Routledge.

Aerts, J., Botzen, W., Bowman, M., Dircke, P. and Ward, P., 2013. Climate adaptation and flood risk in coastal cities. Routledge.

D. Hill, M.J. Bowman, and J.S. Khinda (eds.). 2012. Storm Surge Barriers to Protect New York City: Against the Deluge, Amer. Soc. Civil Eng., pp. 259.

D. Hill, M.J. Bowman, and J.S. Khinda (eds.). 2012. Storm Surge Barriers to Protect New York City: Against the Deluge, Amer. Soc. Civil Eng., pp. 259.

Safina, C. 2011. A Sea in Flames. Random House, Inc. New York.

Safina, C. 2011. A Sea in Flames. Random House, Inc. New York.

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Safina, C. 2010. Nina Delmar and the Great Whale Rescue (Illustr. children’s book).

Safina, C. 2010. Nina Delmar and the Great Whale Rescue (Illustr. children’s book).

Aerts, J., D.C. Major, M.J. Bowman, P. Dierke, M.A. Marfai. 2009. Connecting Delta Cities. VU University Press, Amsterdam, pp. 91.

Aerts, J., D.C. Major, M.J. Bowman, P. Dierke, M.A. Marfai. 2009. Connecting Delta Cities. VU University Press, Amsterdam, pp. 91.

Camhi, M. D., E. K. Pikitch and E. A. Babcock, editors. 2008. Sharks of the Open Ocean: Biology, Fisheries and Conservation. Blackwell Publishing, Oxford, UK. 536 p.

Camhi, M. D., E. K. Pikitch and E. A. Babcock, editors. 2008. Sharks of the Open Ocean: Biology, Fisheries and Conservation. Blackwell Publishing, Oxford, UK. 536 p.

Taylor, D (2008) Praying Up the Sun. San Antonio, TX: Pecan Grove Press

Taylor, D (2008) Praying Up the Sun. San Antonio, TX: Pecan Grove Press

Taylor, D. (2006). Pride of Place: A Contemporary Anthology of Texas Nature Writing. University of North Texas Press.

Taylor, D. (2006). Pride of Place: A Contemporary Anthology of Texas Nature Writing. University of North Texas Press.

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Safina, C. 2006. Voyage of the Turtle. Henry Holt Co. New York.

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Safina, C. 2002. Eye of the Albatross. Henry Holt Co. New York.

Hutner, H. Colonial Women: Race and Culture in Stuart Drama. New York: Oxford University Press, 2001.

Hutner, H. Colonial Women: Race and Culture in Stuart Drama. New York: Oxford University Press, 2001.

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Taylor, D. (2000). The Lawson’s Fork: Headwaters to the Confluence. Spartanburg, SC: Hub City Writers Project, 2000.

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Safina, C. 1998. Song For The Blue Ocean. Henry Holt Co. New York.

Hutner, H. Rereading Aphra Behn: History, Theory, and Criticism. Charlottesville: University Press of Virginia, 1993.

Hutner, H. Rereading Aphra Behn: History, Theory, and Criticism. Charlottesville: University Press of Virginia, 1993.

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2016 Publications

by | Jan 1, 2016

Allam, Bassem Liu, Q., Collier, J. L., & Allam, B. (2016). Seasonality of QPX disease in the Raritan Bay (NY) wild hard clam (Mercenaria mercenaria) population. Aquaculture Research. Aller, Josie Aller, Robert Beaupré, Steven Soulet, G., Skinner, L. C., Beaupré, S....

2015 Publications

by | Jan 5, 2015

Allam, Bassem Wang, K., Espinosa, E. P., Tanguy, A., & Allam, B. (2015). Alterations of the immune transcriptome in resistant and susceptible hard clams (Mercenaria mercenaria) in response to Quahog Parasite Unknown (QPX) and temperature. Fish & Shellfish Immunology....

2014 Publications

by | Jan 10, 2014

Allam, Bassem Rubin, E., Espinosa, E. P., Koller, A., & Allam, B. (2014). Characterization of the secretome of the clam parasite, QPX. International Journal for Parasitology. Raghuvanshi, D. S., Kumari, K., Allam, B. K., & Singh, K. N. (2014). A convenient and green...

2013 Publications

by | Jan 10, 2013

Allam, Bassem Allam B. , Carden WE, Ward JE, Ralph G, Winnicki S, Pales Espinosa E. (2013). Early host-pathogen interactions in marine bivalves: Evidence that the alveolate parasite Perkinsus marinus infects through the oyster mantle during rejection of pseudofeces....

2012 Publications

by | Jan 10, 2012

Allam, Bassem Allam B. 2012. Development of strategies to mitigate QPX disease in the hard clam Mercenaria mercenaria. Journal of Shellfish Research 31(1): 207-207. Sokolowski, M.S., B.A. Allam, K.J. Dunton, M.A. Clark, E.B. Kurtz and M.D.Fast. 2012. Immunophysiology...

2011 Publications

by | Jan 10, 2011

Allam, Bassem Rosa, M.E., J.E. Ward, S.E. Shumway, G.H. Wikfors, B.A. Holohan, E. Pales-Espinosa and B. Allam. 2011. The role of particle surface properties on feeding selectivity by Eastern oysters, Crassostrea virginica, and blue mussels, Mytilus edulis. Journal of...

2010 Publications

by | Jan 10, 2010

Allam, Bassem Pales Espinosa, E., M. Perrigault and B. Allam. 2010. Identification and molecular characterization of a mucosal lectin (MeML) from Mytilus edulis and its potential role in particle capture. Comparative Biochemistry and Physiology 156: 495-501....

2009 Publications

by | Jan 10, 2009

Allam, Bassem Perrigault M., A. Tanguy and B. Allam. 2009. Indentification and quantification of differentially expressed genes in the hard clam, Mercenaria mercenaria, in response to quahog parasite unknown (QPX). BMC Genomics 10: 377. doi:10.1186/1471-2164-10-377...

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