Publications

Peer-reviewed publications by SoMAS Faculty

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Shahraki, Z. M., Mao, X., Waugh, S., Lotfikatouli, S., Walker, H. W., Gobler, C., & Wanlass, J. (2019). Potential release of legacy nitrogen from soil surrounding onsite wastewater leaching pools. Water Research, 115241.

Yakubovskaya, E., T. Zaliznyak, J. Martínez Martínez & G. T. Taylor (2019). Tear down the fluorescent curtain: A new fluorescence suppression method for Raman microspectroscopic analyses. Scientific Reports, 9, 15785. doi:10.1038/s41598-019-52321-3

Aubrecht, K. B., Bourgeois, M., Brush, E. J., MacKellar, J., & Wissinger, J. E. (2019). Integrating Green Chemistry in the Curriculum: Building Student Skills in Systems Thinking, Safety, and Sustainability. Journal of Chemical Education.

Flanagan, A. M., Flood, R. D., Maher, N. P., & Cerrato, R. M. (2019). Quantitatively characterizing benthic community-habitat relationships in soft-sediment, nearshore environments to yield useful results for management. Journal of environmental management, 249, 109361.

Beaupré, S. R., Kieber, D. J., Keene, W. C., Long, M. S., Maben, J. R., Lu, X., … & Chang, R. Y. W. (2019). Oceanic efflux of ancient marine dissolved organic carbon in primary marine aerosol. Science Advances.

Friedman, K., Braccini, M., Bjerregaard‐Walsh, M., Bonfil, R., Bradshaw, C. J., Brouwer, S., … & Frisk, M. G. Informing CITES Parties: Strengthening science‐based decision‐making when listing marine species. Fish and Fisheries.

Bohorquez, J. J., Dvarskas, A., & Pikitch, E. K. (2019). Categorizing global MPAs: A cluster analysis approach. Marine Policy, 108, 103663.

Capotondi, A., Jacox, M., Bowler, C., Kavanaugh, M., Lehodey, P., Barrie, D., Nye, J., … & Eveillard, D. (2019). Observational Needs Supporting Marine Ecosystems Modeling and Forecasting: Insights from US Coastal Applications. Frontiers in Marine Science, 6, 623.

Chi, L., Hameed, S., & Wolfe, C. L. (2019). Comments on “Reconstruction of the Gulf Stream from 1940 to the Present and Correlation with the North Atlantic Oscillation”. Journal of Physical Oceanography, 49(10), 2731-2734.

Endo, S., Zhang, D., Vogelmann, A. M., Kollias, P., Lamer, K., Oue, M., … & Romps, D. M. (2019). Reconciling differences between large‐eddy simulations and Doppler‐lidar observations of continental shallow cumulus cloud‐base vertical velocity. Geophysical Research Letters.

Leonardo, N. M., & Colle, B. A. (2019). An Investigation of Large Along-Track Errors in Extratropical Transitioning North Atlantic Tropical Cyclones in the ECMWF Ensemble. Monthly Weather Review, (2019).

Gownaris, N. J., Santora, C. M., Davis, J. B., & Pikitch, E. K. (2019). Gaps in Protection of Important Ocean Areas: A Spatial Meta-Analysis of Ten Global Mapping Initiatives. Frontiers in Marine Science, 6, 650.

Grieb, T. M., Fisher, N. S., Karimi, R., & Levin, L. (2019). An assessment of temporal trends in mercury concentrations in fish. Ecotoxicology, 1-11.

Pochron, S., Simon, L., Mirza, A., Littleton, A., Sahebzada, F., & Yudell, M. (2019). Glyphosate but not Roundup® harms earthworms (Eisenia fetida). Chemosphere, 125017.

Rossby, T., Flagg, C. N., Donohue, K., Fontana, S., Curry, R., Andres, M., & Forsyth, J. (2019). OLEANDER IS MORE THAN A FLOWER. Oceanography, 32(3), 126.

Young, C. S., Lowell, A., Peterson, B., & Gobler, C. J. (2019). Ocean acidification and food limitation combine to suppress herbivory by the gastropod Lacuna vincta. Marine Ecology Progress Series, 627, 83-94.

Mech, M., Kliesch, L. L., Anhäuser, A., Rose, T., Kollias, P., & Crewell, S. (2019). Microwave Radar/radiometer for Arctic Clouds (MiRAC): first insights from the ACLOUD campaign. Atmospheric Measurement Techniques, 12(9), 5019-5037.

Kim, H. M., Zhou, Y., & Alexander, M. A. (2019). Changes in atmospheric rivers and moisture transport over the Northeast Pacific and western North America in response to ENSO diversity. Climate Dynamics (2019) 52: 7375.

Salmon, O. E., Welp, L. R., Baldwin, M. E., Hajny, K. D., Stirm, B. H., & Shepson, P. B. (2019). Vertical profile observations of water vapor deuterium excess in the lower troposphere. Atmospheric Chemistry and Physics, 19(17), 11525-11543.

Kollias, P., Puigdomènech Treserras, B., & Protat, A. (2019). Calibration of the 2007–2017 record of Atmospheric Radiation Measurements cloud radar observations using CloudSat. Atmospheric Measurement Techniques, 12(9), 4949-4964.

Lamer, K., Puigdomènech Treserras, B., Zhu, Z., Isom, B., Bharadwaj, N., & Kollias, P. (2019). Characterization of shallow oceanic precipitation using profiling and scanning radar observations at the Eastern North Atlantic ARM observatory. Atmospheric Measurement Techniques, 12(9), 4931-4947.

Zhang, D., Vogelmann, A., Kollias, P., Luke, E., Yang, F., Lubin, D., & Wang, Z. (2019). Comparison of Antarctic and Arctic Single‐layer Stratiform Mixed‐phase Cloud Properties Using Ground‐based Remote Sensing Measurements. Journal of Geophysical Research: Atmospheres.

Tang, Y. Z., Ma, Z., Hu, Z., Deng, Y., Yang, A., Lin, S., … & Gobler, C. J. 3,000 km and 1,500‐year presence of Aureococcus anophagefferens reveals indigenous origin of brown tides in China. Molecular Ecology.

Foley, C. M., & Lynch, H. J. (2019). A method to estimate pre‐exploitation population size. Conservation Biology.

Ingram, E. C., Cerrato, R. M., Dunton, K. J., & Frisk, M. G. (2019). Endangered Atlantic Sturgeon in the New York Wind Energy Area: implications of future development in an offshore wind energy site. Scientific reports, 9(1), 1-13.

Frossard, A. A., Long, M. S., Keene, W. C., Duplessis, P., Kinsey, J. D., Maben, J. R., Beaupré, S.R., … & Lu, X. (2019). Marine Aerosol Production via Detrainment of Bubble Plumes Generated in Natural Seawater with a Forced‐Air Venturi. Journal of Geophysical Research: Atmospheres.

Ge, K., & Colle, B. A. (2019). Multi‐Decadal Historical Trends in Tropical Cyclone Intensity and Evolution Characteristics for Two North Atlantic Sub‐basins. Journal of Geophysical Research: Atmospheres.

Wing, A. A., Camargo, S. J., Sobel, A. H., Kim, D., Moon, Y., Murakami, H., Reed, K. A. … & Zhao, M. (2019). Moist static energy budget analysis of tropical cyclone intensification in high-resolution climate models. Journal of Climate, 32(18), 6071-6095.

Dheilly, N. M., Ewald, P. W., Brindley, P. J., Fichorova, R. N., & Thomas, F. (2019). Parasite-microbe-host interactions and cancer risk. PLoS pathogens, 15(8), e1007912.

Li, C., Ding, S., Yang, L., Zhu, Q., Chen, M., Tsang, D. C., … & Zhang, C. (2019). Planar optode: A two-dimensional imaging technique for studying spatial-temporal dynamics of solutes in sediment and soil. Earth-Science Reviews, 102916.

Brunner, K., Rivas, D., & Lwiza, K. M. (2019). Application of classical coastal trapped wave theory to high scattering regions. Journal of Physical Oceanography, (2019).

Oh, S. B., Kollias, P., Lee, J. S., Lee, S. W., Lee, Y. H., & Jeong, J. H. Rain‐Rate Estimation Algorithm using Signal Attenuation of Ka‐band Cloud Radar. Meteorological Applications.

Shantharam, A. K., Padilla, D. K., Peterson, B. J., Doall, M., Lobue, C., & Webb, A. (2019). Macrofaunal Community Structure Following the Restocking of Northern Quahog (Mercenaria mercenaria) to Great South Bay, Long Island, NY. Journal of Shellfish Research, 38(2), 259-270.

Drueke, S., Kirshbaum, D. J., & Kollias, P. Evaluation of Shallow‐Cumulus Entrainment Rate Retrievals Using Large‐Eddy Simulation. Journal of Geophysical Research: Atmospheres.

Shi, R., Xu, S., Qi, Z., Zhu, Q., Huang, H., & Weber, F. (2019). Influence of suspended mariculture on vertical distribution profiles of bacteria in sediment from Daya Bay, Southern China. Marine Pollution Bulletin, 146, 816-826.

Kim, H., Janiga, M. A., & Pegion, K. (2019). MJO Propagation Processes and Mean Biases in the SubX and S2S Reforecasts. Journal of Geophysical Research: Atmospheres.

Zheng, X., Golaz, J. C., Xie, S., Tang, Q., Lin, W., Zhang, M., … & Roesler, E. L. (2019). The Summertime Precipitation Bias in E3SM Atmosphere Model Version 1 (EAMv1) over the Central United States. Journal of Geophysical Research: Atmospheres.

Chi, L., Wolfe, C. L., & Hameed, S. (2019). The Distinction Between the Gulf Stream and its North Wall. Geophysical Research Letters.

Zheng, X., Golaz, J. C., Xie, S., Tang, Q., Lin, W., Zhang, M., … & Roesler, E. L. (2019). The Summertime Precipitation Bias in E3SM Atmosphere Model Version 1 over the Central United States. Journal of Geophysical Research: Atmospheres.

Zhang, T., Lin, W., Lin, Y., Zhang, M., Yu, H., Cao, K., & Xue, W. (2019). Prediction of Tropical Cyclone Genesis from Mesoscale Convective Systems using Machine Learning. Weather and Forecasting, (2019).

Laskin, A., Moffet, R. C., Fraund, M., Wang, J., Gilles, M. K., Knopf, D., & China, S. (2019). Chemical Imaging of Atmospheric Organic Particles in the Southern Great Plains Field Campaign Report (No. DOE/SC-ARM-19-018). DOE Office of Science Atmospheric Radiation Measurement (ARM) Program (United States).

Finn, D., Chandrasekhar, D., & Xiao, Y. (2019). A Region Recovers: Planning for Resilience after Superstorm Sandy. Journal of Planning Education and Research, 0739456X19864145.

Frossard, A. A., Gérard, V., Duplessis, P., Kinsey, J. D., Lu, X., Zhu, Y., … & Beaupré, S. R. (2019). Properties of Seawater Surfactants Associated with Primary Marine Aerosol Particles Produced by Bursting Bubbles at a Model Air–Sea Interface. Environmental science & technology.

Goldsmith, K. A., Lau, S., Poach, M. E., Sakowicz, G. P., Trice, T. M., Ono, C. R., Nye, J.A. … & Saba, G. K. (2019). Scientific considerations for acidification monitoring in the US Mid-Atlantic Region. Estuarine, Coastal and Shelf Science.

Aller, R. C., Aller, J. Y., Zhu, Q., Heilbrun, C., Klingensmith, I., & Kaushik, A. (2019). Worm tubes as conduits for the electrogenic microbial grid in marine sediments. Science Advances, 5(7), eaaw3651.

McDowall, P., & Lynch, H. J. (2019). When the “selfish herd” becomes the “frozen herd”: spatial dynamics and population persistence in a colonial seabird. Ecology.

Jimenez, M. Y., Ivany, L. C., Judd, E. J., & Henkes, G. (2019). Low and seasonally variable salinity in the Pennsylvanian equatorial Appalachian Basin. Earth and Planetary Science Letters, 519, 182-191.

Chavas, D. R., & Reed, K. A. (2019). Dynamical aquaplanet experiments with uniform thermal forcing: system dynamics and implications for tropical cyclone genesis and size. Journal of the Atmospheric Sciences, (2019).

Connelly, R., & Colle, B. A. (2019). Validation of Snow Multi-Bands in the Comma Head of an Extratropical Cyclone Using a 40-Member Ensemble. Weather and Forecasting, (2019).

Brunner, K., Rivas, D., & Lwiza, K. M. (2019). Application of classical coastal trapped wave theory to high scattering regions. Journal of Physical Oceanography, (2019).

Ko, H. C., Chun, H. Y., Wilson, R., & Geller, M. A. (2019). Characteristics of Atmospheric Turbulence Retrieved from High Vertical‐Resolution Radiosonde Data in the US. Journal of Geophysical Research: Atmospheres, 124(14), 7553-7579.

Bopp, J. J., Sclafani, M., Smith, D. R., McKown, K., Sysak, R., & Cerrato, R. M. (2019). Geographic-Specific Capture–Recapture Models Reveal Contrasting Migration and Survival Rates of Adult Horseshoe Crabs (Limulus polyphemus). Estuaries and Coasts, 1-16.

Olin, J. A., Cerrato, R. M., Nye, J. A., Sagarese, S. R., Sclafani, M., Zacharias, J. P., & Frisk, M. G. (2019). Evidence for Ecosystem Changes Within a Temperate Lagoon Following a Hurricane-Induced Barrier Island Breach. Estuaries and Coasts, 1-15.

Wang, S., McNamara, S. M., Moore, C. W., Obrist, D., Steffen, A., Shepson, P. B., … & Pratt, K. A. (2019). Direct detection of atmospheric atomic bromine leading to mercury and ozone depletion. Proceedings of the National Academy of Sciences, 116(29), 14479-14484.

Lucca, B. M., & Warren, J. D. (2019). Fishery-independent observations of Atlantic menhaden abundance in the coastal waters south of New York. Fisheries Research, 218, 229-236.

Hajny, K., Salmon, O. E., Rudek, J., Lyon, D. R., Stuff, A. A., Stirm, B. H., … & Shepson, P. B. (2019). Observations of Methane Emissions from Natural Gas-Fired Power Plants. Environmental Science & Technology.

Pinardi, N., Cessi, P., Borile, F., & Wolfe, C. L. (2019). The Mediterranean Sea Overturning Circulation. Journal of Physical Oceanography, 49(7), 1699-1721.

Battaglia, A., & Kollias, P. (2019). Evaluation of differential absorption radars in the 183 GHz band for profiling water vapour in ice clouds. Atmospheric Measurement Techniques, 12(6), 3335-3349.

Xie, S., Wang, Y. C., Lin, W., Ma, H. Y., Tang, Q., Tang, S., … & Zhang, M. (2019). Improved Diurnal Cycle of Precipitation in E3SM with a Revised Convective Triggering Function. Journal of Advances in Modeling Earth Systems.

Aller, R. C., & Cochran, J. K. (2019). The critical role of bioturbation for particle dynamics, priming potential, and organic C remineralization in marine sediments: local and basin scales. Frontiers in Earth Science, 7, 157.

Adamczak, S. K., Pabst, A., McLellan, W., & Thorne, L. (2019). Using 3D models to improve estimates of marine mammal size and external morphology. Frontiers in Marine Science, 6, 334.

Lynch, M. A., Youngflesh, C., Agha, N. H., Ottinger, M. A., & Lynch, H. J. (2019). Tourism and stress hormone measures in Gentoo Penguins on the Antarctic Peninsula. Polar Biology, 1-8.

Moffet, R. C., Wang, J., Laskin, A., Gilles, M. K., & Knopf, D. (2019). Chemical Imaging of Atmospheric Organic Particles in the Eastern North Atlantic Field Campaign Report (No. DOE/SC-ARM-19-013). DOE Office of Science Atmospheric Radiation Measurement (ARM) Program (United States).

McNamara, S. M., Raso, A. R., Wang, S., Thanekar, S., Boone, E. J., Kolesar, K. R., … Shepson, P. B. & Pratt, K. A. (2019). Springtime Nitrogen Oxide-Influenced Chlorine Chemistry in the Coastal Arctic. Environmental science & technology.

Sissmann, O., Price, R., Elvert, M., Heuer, V. B., Prieto, X., Monnin, C., … & Kohler, E. (2019). Abiogenic formation of H2, light hydrocarbons and other short-chain organic compounds within the serpentinite mud volcanoes of the Marianna Trench. In E3S Web of Conferences (Vol. 98, p. 02011). EDP Sciences.

Satoh, M., B. Stevens, F. Judt, M. Khairoutdinov, S.-J. Lin, W. Putman, and P. Duben (2019). Global Cloud-Resolving Models, Curr Clim Change Rep, https://doi.org/10.1007/s40641-019-00131-0

Griffith, A. W., Doherty, O. M., & Gobler, C. J. (2019). Ocean warming along temperate western boundaries of the Northern Hemisphere promotes an expansion of Cochlodinium polykrikoides blooms. Proceedings of the Royal Society B, 286(1904), 20190340.

Louca, S., Scranton, M. I., Taylor, G. T., Astor, Y. M., Crowe, S. A., & Doebeli, M. (2019). Circumventing kinetics in biogeochemical modeling. Proceedings of the National Academy of Sciences, 116(23), 11329-11338.

Bond, M. E., Valentin-Albanese, J., Babcock, E. A., Heithaus, M. R., Grubbs, R. D., Cerrato, R., Peterson B. J., Pikitch E. K., & Chapman, D. D. (2019). Top predators induce habitat shifts in prey within marine protected areas. Oecologia, 1-11.

Herrington, A. R., Lauritzen, P. H., Reed, K. A., Goldhaber, S., & Eaton, B. E. Exploring a Lower‐Resolution Physics Grid in CAM‐SE‐CSLAM. Journal of Advances in Modeling Earth Systems.

Bourdeau, P. E., & Padilla, D. K. (2019). Cue specificity of predator-induced phenotype in a marine snail: is a crab just a crab?. Marine Biology, 166(7), 84.

Lu, X., and S. R. Beaupré (2019), Optimized volume determinations and uncertainties for accurate and precise manometry, Radiocarbon, doi:10.1017/RDC.2019.43.

Dias, B. S., Frisk, M. G., & Jordaan, A. (2019). Opening the tap: Increased riverine connectivity strengthens marine food web pathways. PloS one, 14(5), e0217008.

Griffith, A. W., & Gobler, C. J. (2019). Harmful algal blooms: a climate change co-stressor in marine and freshwater ecosystems. Harmful Algae.

Zheng, M., Chang, E. K., & Colle, B. A. (2019). Evaluating US East Coast Winter Storms in a Multimodel Ensemble Using EOF and Clustering Approaches. Monthly Weather Review, 147(6), 1967-1987.

Carroll, J. M., Stubler, A. D., Finelli, C. M., & Peterson, B. J. (2019). The Potential use of Seagrass Herbivory Patterns as an Indicator of Herbivore Community Change after Tropical Marine Protected Area Establishment. Gulf and Caribbean Research, 30(1), SC1-SC6.

Collier, J. L., & Rest, J. S. (2019). Swimming, gliding, and rolling toward the mainstream: cell biology of marine protists. Molecular biology of the cell, 30(11), 1245-1248.

Buongiorno, J., Herbert, L.C., Wehrmann, L.M., Michaud, A.B., Laufer, K., Røy, H., Jørgensen, B.B., Szynkiewicz, A., Faiia, A., Yeager, K.M., Schindler, K. and Lloyd, K.G., 2019. Complex Microbial Communities Drive Iron and Sulfur Cycling in Arctic Fjord Sediments. Applied and Environmental Microbiology, 85(14): e00949-19.

Cochran, J. K., Bokuniewicz, H. J., & Yager, P. L. (2019). Encyclopedia of Ocean Sciences. Academic Press.

Cochran, J. K., Bokuniewicz, H. J., & Yager, P. L. (2019). Encyclopedia of Ocean Sciences. Academic Press.

Louca, S., Astor, Y. M., Doebeli, M., Taylor, G. T., & Scranton, M. I. (2019). Microbial metabolite fluxes in a model marine anoxic ecosystem. BioRxiv, 625087.

Zheng, C., & Chang, E. K. M. (2019). The Role of MJO Propagation, Lifetime, and Intensity on Modulating the Temporal Evolution of the MJO Extratropical Response. Journal of Geophysical Research: Atmospheres, 124(10), 5352-5378.

Lin, N., Marsooli, R., & Colle, B. A. (2019). Storm surge return levels induced by mid-to-late-twenty-first-century extratropical cyclones in the Northeastern United States. Climatic Change, 1-16.

Langendijk, G., Aubry-Wake, C., Osman, M., Gulizia, C., Attig-Bahar, F., Behrens, E., van der Linden, E. C., … & Reed, K. A.(2019). Three ways forwards to improve regional information for extreme events: an early career perspective. Frontiers in Environmental Science, 7, 6.

Rountos, K. J., Kim, J. J., Hattenrath-Lehmann, T. K., & Gobler, C. J. (2019). Effects of the harmful algae, Alexandrium catenella and Dinophysis acuminata, on the survival, growth, and swimming activity of early life stages of forage fish. Marine environmental research, 148, 46-56.

Goldsmith, K. A., Lau, S., Poach, M. E., Sakowicz, G. P., Trice, T. M., Ono, C. R., Nye, J.A. … & Saba, G. K. (2019). Scientific considerations for acidification monitoring in the US Mid-Atlantic Region. Estuarine, Coastal and Shelf Science.

Acquistapace, C., Löhnert, U., Maahn, M., & Kollias, P. (2019). A new criterion to improve operational drizzle detection with ground-based remote sensing. Journal of Atmospheric and Oceanic Technology, (2019).

Klein, J, Tucker C, Nolin, A, Hopping K, Reid C., Steger A., Grêt‐Regamey S. Lavorel, B. Müller, E. T. Yeh, R. B. Boone, P. Bourgeron, V. Butsic, E. Castellanos, X. Chen, S. K. Dong G, Greenwood, M, Keiler, R. Marchant, R. Seidl, T. Spies, Thorn J., and K. Yager, (2019). Catalyzing transformations to sustainability in the world’s mountains. Earth’s Future, 7, 547– 557. https://doi.org/10.1029/2018EF001024

Klein, J. A., Tucker, C. M., Nolin, A. W., Hopping, K. A., Reid, R. S., Steger, C., … & Boone, R. B. (2019). Catalyzing transformations to sustainability in the world’s mountains. Earth’s Future, 7(5), 547-557.

Slade, J. H., Ault, A. P., Bui, A., Ditto, J., Lei, Z., Bondy, A. L., … & Shepson, P.B. (2019). Bouncier Particles at Night: Biogenic Secondary Organic Aerosol Chemistry and Sulfate Drive Diel Variations in the Aerosol Phase in a Mixed Forest. Environmental science & technology.

Frisk, M. G., Shipley, O. N., Martinez, C. M., McKown, K. A., Zacharias, J. P., & Dunton, K. J. (2019). First Observations of Long‐Distance Migration in a Large Skate Species, the Winter Skate: Implications for Population Connectivity, Ecosystem Dynamics, and Management. Marine and Coastal Fisheries, 11(2), 202-212.

Levinton, J., & Doall, M. (2019). Feeding Access of Eastern Oysters to the Winter–Spring Phytoplankton Bloom: Evidence from Jamaica Bay, New York. Journal of Shellfish Research, 38(1), 115-121.

Walker, B. D., S. R. Beaupré, S. Griffin, and E. R. M. Druffel (2019). UV photochemical oxidation and extraction of marine dissolved organic carbon at UC Irvine: status, surprises, and methodological recommendations. Radiocarbon, 1-15, doi: 10.1017/rdc.2019.9

Wang, W. L., & Lee, C. (2019). A Bayesian statistical approach to inferring particle dynamics from in-situ pump POC and chloropigment data from the Mediterranean Sea. Marine Chemistry.

Hu, W., Liu, P., Zhang, Q., & He, B. (2019). Dominant patterns of winter-time intraseasonal surface air temperature over the CONUS in response to MJO convections. Climate Dynamics, 1-20.

Halfacre, J. W., Shepson, P. B., & Pratt, K. A. (2019). pH-dependent production of molecular chlorine, bromine, and iodine from frozen saline surfaces. Atmospheric Chemistry and Physics, 19(7), 4917-4931.

Tamborski, J., van Beek, P., Rodellas, V., Monnin, C., Bergsma, E., Stieglitz, T., Heilbrun, C. , Cochran, J. K., … & Bejannin, S. (2019). Temporal variability of lagoon–sea water exchange and seawater circulation through a Mediterranean barrier beach. Limnology and Oceanography.

Rius, M., Rest, J., & Collier, J. (2019). Why does a heterotrophic marine protist produce carotenoids? Genetic approaches to investigate the ecophysiology of the thraustochytrid Aurantiochytrium limacinum. Access Microbiology, 1(1A).

Wakeham, S. G., & Lee, C. (2019). Limits of our knowledge, part 2: Selected frontiers in marine organic biogeochemistry. Marine Chemistry.

Raven, J. A., Gobler, C. J., & Hansen, P. J. (2019). Dynamic CO2 and pH levels in coastal, estuarine, and inland waters: Theoretical and observed effects on harmful algal blooms. Harmful Algae.

Griffith, A. W., Harke, M. J., DePasquale, E., Berry, D. L., & Gobler, C. J. (2019). The harmful algae, Cochlodinium polykrikoides and Aureococcus anophagefferens, elicit stronger transcriptomic and mortality response in larval bivalves (Argopecten irradians) than climate change stressors. Ecology and evolution.

Gobler, C. J., Young, C. S., Goleski, J., Stevens, A., Thickman, J., Wallace, R. B., … & Hattenrath-Lehmann, T. K. (2019). Accidental ecosystem restoration? Assessing the estuary-wide impacts of a new ocean inlet created by Hurricane Sandy. Estuarine, Coastal and Shelf Science.

McCartin, K., Jordaan, A., Sclafani, M., Cerrato, R., & Frisk, M. G. (2019). A New Paradigm in Alewife Migration: Oscillations between Spawning Grounds and Estuarine Habitats. Transactions of the American Fisheries Society.

Zheng, M., Chang, E. K., & Colle, B. A. (2019). Evaluating US East Coast Winter Storms in a Multi-Model Ensemble Using EOF and Clustering Approaches. Monthly Weather Review, (2019).

Oue, M., Kollias, P., Shapiro, A., Tatarevic, A., & Matsui, T. (2019). Investigation of observational error sources in multi-Doppler-radar three-dimensional variational vertical air motion retrievals. Atmospheric Measurement Techniques, 12(3), 1999-2018.

Seo, E., Lee, M. I., Jeong, J. H., Koster, R. D., Schubert, S. D., Kim, H. M., … & Scaife, A. A. (2019). Impact of soil moisture initialization on boreal summer subseasonal forecasts: mid-latitude surface air temperature and heat wave events. Climate Dynamics, 52(3-4), 1695-1709.

Zarzycki, C. M., Jablonowski, C., Kent, J., Lauritzen, P. H., Nair, R., Reed, K. A., … & Heikes, R. (2019). DCMIP2016: the splitting supercell test case. Geoscientific Model Development, 12, 879-892.

Pochron, S., Choudhury, M., Gomez, R., Hussaini, S., Illuzzi, K., Mann, M., Mezic, M., Nikakis, J. & Tucker, C. (2019). Temperature and body mass drive earthworm (Eisenia fetida) sensitivity to a popular glyphosate-based herbicide. Applied Soil Ecology.

Portet, A., Pinaud, S., Chaparro, C., Galinier, R., Dheilly, N. M., Portela, J., … & Gourbal, B. (2019). Sympatric versus allopatric evolutionary contexts shape differential immune response in Biomphalaria/Schistosoma interaction. PLoS pathogens, 15(3), e1007647.

Cooper, D. J., Sueltenfuss, J., Oyague, E., Yager, K., Slayback, D., Caballero, E. M. C., … & Mark, B. G. Drivers of Peatland Water Table Dynamics in the Central Andes, Bolivia and Peru. Hydrological Processes.

Moriceau B, Gehlen M, Tréguer P, Baines S, Livage J and André L (2019) Editorial: Biogeochemistry and Genomics of Silicification and Silicifiers. Front. Mar. Sci. 6:57. doi: 10.3389/fmars.2019.00057

Orton, P. , Lin, N. , Gornitz, V. , Colle, B. , Booth, J. , Feng, K. , Buchanan, M. , Oppenheimer, M. and Patrick, L. (2019), New York City Panel on Climate Change 2019 Report Chapter 4: Coastal Flooding. Ann. N.Y. Acad. Sci., 1439: 95-114. doi:10.1111/nyas.14011

González, J. E., Ortiz, L. , Smith, B. K., Devineni, N. , Colle, B. , Booth, J. F., Ravindranath, A. , Rivera, L. , Horton, R. , Towey, K. , Kushnir, Y. , Manley, D. , Bader, D. and Rosenzweig, C. (2019), New York City Panel on Climate Change 2019 Report Chapter 2: New Methods for Assessing Extreme Temperatures, Heavy Downpours, and Drought. Ann. N.Y. Acad. Sci., 1439: 30-70. doi:10.1111/nyas.14007

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Ren, X., Hall, D. L., Vinciguerra, T., Benish, S. E., Stratton, P. R., Ahn, D., Shepson, P. B., et al. (2019). Methane emissions from the Marcellus Shale in Southwestern Pennsylvania and northern West Virginia based on airborne measurements. Journal of Geophysical Research: Atmospheres, 124, 1862–1878.  https://doi.org/10.1029/2018JD029690

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Griffith, A. W., Shumway, S. E., & Gobler, C. J. (2019). Differential Mortality of North Atlantic Bivalve Molluscs During Harmful Algal Blooms Caused by the Dinoflagellate, Cochlodinium (aka Margalefidinium) polykrikoides. Estuaries and Coasts, 42(1), 190-203.

Yang, K., Davidson, R. A., Vergara, H., Kolar, R. L., Dresback, K. M., Colle, B. A., … & Nozick, L. K. (2019). Incorporating inland flooding into hurricane evacuation decision support modeling. Natural Hazards, 1-22.

Reed, K. A., Bacmeister, J. T., Huff, J. J. A., Wu, X., Bates, S. C., & Rosenbloom, N. A. (2019). Exploring the impact of dust on North Atlantic hurricanes in a high‐resolution climate model. Geophysical Research Letters.

Chia, M. A., Kramer, B. J., Jankowiak, J. G., Bittencourt-Oliveira, M. D. C., & Gobler, C. J. (2019). The Individual and Combined Effects of the Cyanotoxins, Anatoxin-a and Microcystin-LR, on the Growth, Toxin Production, and Nitrogen Fixation of Prokaryotic and Eukaryotic Algae. Toxins, 11(1), 43.

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Muller-Karger F, Astor Y, Benitez-Nelson C, Buck K, Fanning K, Lorenzoni L, Montes E, Scranton M, Rueda-Roa D, Taylor G, Thunell R, Tappa E, Varela R. (2019). Scientific legacy of the CARIACO oceanographic time-series program. Annual Review of Marine Sciences 11:413–37.

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Donaton, J., Durham, K., Cerrato, R., Schwerzmann, J., & Thorne, L. H. (2019). Long-term changes in loggerhead sea turtle diet indicate shifts in the benthic community associated with warming temperatures. Estuarine, Coastal and Shelf Science.

Shipley, O. N., Lee, C. S., Fisher, N. S., Burruss, G., Frisk, M. G., Brooks, E. J., … & Madigan, D. J. (2019). Trophodynamics and mercury bioaccumulation in reef and open-ocean fishes from The Bahamas with a focus on two teleost predators. Marine Ecology Progress Series, 608, 221-232.

Xie, J., Zhang, M., & Liu, H. (2019). Role of Arctic sea ice in the 2014–15 Eurasian warm winter. Geophysical Research Letters.

Shipley, O. N., Olin, J. A., Power, M., Cerrato, R. M., & Frisk, M. G. (2018). Questioning assumptions of trophic behavior in a broadly ranging marine predator guild. Ecography.

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Milligan, R. J., Bernard, A. M., Boswell, K. M., Bracken-Grissom, H. D., D’Elia, M. A., deRada, S., … & Hu, C. (2018). The Application of Novel Research Technologies by the Deep Pelagic Nekton Dynamics of the Gulf of Mexico (DEEPEND) Consortium. Marine Technology Society Journal, 52(6), 81-86.

Fuirst, M., Veit, R. R., Hahn, M., Dheilly, N., & Thorne, L. H. (2018). Effects of urbanization on the foraging ecology and microbiota of the generalist seabird Larus argentatus. PloS one, 13(12), e0209200.

Herrington, A. R., Lauritzen, P. H., Taylor, M. A., Goldhaber, S., Eaton, B. E., Bacmeister, J. T., … & Ullrich, P. A. (2019). Physics–Dynamics Coupling with Element-Based High-Order Galerkin Methods: Quasi-Equal-Area Physics Grid. Monthly Weather Review, 147(1), 69-84.

Herrington, A. R., Lauritzen, P. H., Taylor, M. A., Goldhaber, S., Eaton, B. E., Bacmeister, J. T., … & Ullrich, P. A. (2018). Physics-dynamics coupling with element-based high-order Galerkin methods: quasi equal-area physics grid. Monthly Weather Review, (2018).

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Frassoni, A., Castilho, D., Rixen, M., Ramirez, E., de Mattos, J. G. Z., Kubota, P., … & de Campos Velho, H. F. (2018). Building the Next Generation of Climate Modelers: Scale-Aware Physics Parameterization and the “Grey Zone” Challenge. Bulletin of the American Meteorological Society, 99(11), ES185-ES189.

Cisternas Novoa, C., Lee, C., Tang, T., de Jesus, R., & Engel, A. (2018). Effects of higher CO2 and temperature on exopolymer particle content and physical properties of marine aggregates. Frontiers in Marine Science, 5, 500.

Zheng, G., Wang, Y., Aiken, A. C., Gallo, F., Jensen, M. P., Kollias, P., … & Wood, R. (2018). Marine boundary layer aerosol in the eastern North Atlantic: seasonal variations and key controlling processes. Atmospheric Chemistry and Physics, 18(23), 17615-17635.

Tomasetti S.J., Morrell B.K., Merlo L.R., Gobler C.J. (2018). Individual and combined effects of low dissolved oxygen and low pH on survival of early stage larval blue crabs, Callinectes sapidus. PLoS ONE 13(12): e0208629. https://doi.org/10.1371/journal.pone.0208629

Khairoutdinov, M. F., & Emanuel, K. (2018). Intraseasonal Variability in a Cloud-Permitting Near-Global Equatorial Aquaplanet Model. Journal of the Atmospheric Sciences, 75(12), 4337-4355.

Siskey, M. R., Shipley, O. N., & Frisk, M. G. Skating on thin ice: Identifying the need for species‐specific data and defined migration ecology of Rajidae spp. Fish and Fisheries.

Parishani, H., Pritchard, M. S., Bretherton, C. S., Terai, C. R., Wyant, M. C., Khairoutdinov, M., & Singh, B. Insensitivity of the cloud response to surface warming under radical changes to boundary layer turbulence and cloud microphysics: Results from the UltraParameterized CAM. Journal of Advances in Modeling Earth Systems.

Dvarskas, A. (2018). Experimental ecosystem accounting for coastal and marine areas: A pilot application of the SEEA-EEA in Long Island coastal bays. Marine Policy.

Robledo, J. A. F., Yadavalli, R., Allam, B., Pales-Espinosa, E., Gerdol, M., Greco, S., … & Tracy, A. N. (2018). From the raw bar to the bench: Bivalves as models for human health. Developmental & Comparative Immunology.

Bire, S., & Wolfe, C. L. (2018). The role of eddies in buoyancy-driven eastern boundary currents. Journal of Physical Oceanography, (2018).

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Kim, H., F. Vitart, and D.E. Waliser, 2018: Prediction of the Madden–Julian Oscillation: A Review. J. Climate, 31, 9425–9443, https://doi.org/10.1175/JCLI-D-18-0210.1

Ziegler, C. M., Zacharias, J. P., & Frisk, M. G. (2018). Migration diversity, spawning behavior and habitat utilization of Winter Flounder. Canadian Journal of Fisheries and Aquatic Sciences, (ja).

Borque, P., Luke, E. P., Kollias, P., & Yang, F. (2018). Relationship Between Turbulence and Drizzle in Continental and Marine Low Stratiform Clouds. Journal of the Atmospheric Sciences, 75(12), 4139-4148.

Humphries, G. R. W., Che-Castaldo, C., Bull, P. J., Lipstein, G., Ravia, A., Carrión, B., … & Lynch, H. J. (2018). Predicting the future is hard and other lessons from a population time series data science competition. Ecological Informatics, 48, 1-11.

Schultz, D. M., Bosart, L. F., Colle, B. A., Davies, H. C., Dearden, C., Keyser, D., … & Winters, A. C. (2018). Extratropical Cyclones: A Century Of Research On Meteorology’s Centerpiece. Meteorological Monographs.

Taylor, G. T., Suter, E. A., Pachiadaki, M. G., Astor, Y., Edgcomb, V. P., & Scranton, M. I. (2017). Temporal shifts in dominant sulfur-oxidizing chemoautotrophic populations across the Cariaco Basin’s redoxcline. Deep Sea Research Part II: Topical Studies in Oceanography.

Chandrasekhar, D., Xiao, Y., Rothfeder, R. and Finn, D. (2018). What drives household recovery after disasters? A case study of New York City after 2012 Hurricane Sandy. Journal of Environmental Planning and Management. https://doi.org/10.1080/09640568.2018.1492907

Zhou, Y., Kim, H., & Guan, B. (2018). Life Cycle of Atmospheric Rivers: Identification and Climatological Characteristics. Journal of Geophysical Research: Atmospheres.

Young, C. S., & Gobler, C. J. (2018). The ability of macroalgae to mitigate the negative effects of ocean acidification on four species of North Atlantic bivalve. Biogeosciences, 15(20), 6167-6183.

Kollias, P., Battaglia, A., Tatarevic, A., Lamer, K., Tridon, F., & Pfitzenmaier, L. (2018, October). The EarthCARE cloud profiling radar (CPR) doppler measurements in deep convection: challenges, post-processing, and science applications. In Remote Sensing of the Atmosphere, Clouds, and Precipitation VII (Vol. 10776, p. 107760R). International Society for Optics and Photonics.

Kopec, A. D., Kidd, K. A., Fisher, N. S., Bowen, M., Francis, C., Payne, K., & Bodaly, R. A. (2019). Spatial and temporal trends of mercury in the aquatic food web of the lower Penobscot River, Maine, USA, affected by a chlor-alkali plant. Science of The Total Environment, 649, 770-791.

Lamer, K., Fridlind, A. M., Ackerman, A. S., Kollias, P., Clothiaux, E. E., & Kelley, M. (2018). 2-SIM: a GCM-oriented ground-observation forward-simulator framework for objective evaluation of cloud and precipitation phase. Geoscientific Model Development, 11(10), 4195-4214.

Wang, C., Cerrato, R. M., & Fisher, N. S. (2018). Temporal changes in 137Cs concentrations in fish, sediments, and seawater off Fukushima Japan. Environmental Science & Technology.

Zipori, A., Reicher, N., Erel, Y., Rosenfeld, D., Sandler, A., Knopf, D. A., & Rudich, Y. (2018). The role of secondary ice processes in mid‐latitude continental clouds. Journal of Geophysical Research: Atmospheres.

Khairoutdinov, M. F., & Emanuel, K. (2018). Intraseasonal Variability in a Cloud-Permitting Near-Global Equatorial Aqua-Planet Model. Journal of the Atmospheric Sciences, (2018).

Zipori, A., Reicher, N., Erel, Y., Rosenfeld, D., Sandler, A., Knopf, D. A., & Rudich, Y. (2018). The Role of Secondary Ice Processes in Midlatitude Continental Clouds. Journal of Geophysical Research: Atmospheres.

Xiao, Y., Wu, K., Finn, D. and Chandrasekar, D. (2018) “Community Businesses as Social Units in Post-Disaster Recovery,” Journal of Planning Education and Research. https://doi.org/10.1177/0739456X18804328

Stevens, A. M., & Gobler, C. J. (2018). Interactive effects of acidification, hypoxia, and thermal stress on growth, respiration, and survival of four North Atlantic bivalves. Marine Ecology Progress Series, 604, 143-161.

Stevens, A. M., & Gobler, C. J. (2018). Interactive effects of acidification, hypoxia, and thermal stress on growth, respiration, and survival of four North Atlantic bivalves. Marine Ecology Progress Series, 604, 143-161.

Lau, Y. T., Santos, B., Barbosa, M., Espinosa, E. P., & Allam, B. (2018). Regulation of apoptosis-related genes during interactions between oyster hemocytes and the alveolate parasite Perkinsus marinus. Fish & shellfish immunology.

Zhu, J., Zhang, M., Zhang, Y., Zeng, X., & Xiao, X. (2018). Response of tropical terrestrial gross primary production to the super El Niño event in 2015. Journal of Geophysical Research: Biogeosciences.

Stepanuk, J. E., Read, A. J., Baird, R. W., Webster, D. L., & Thorne, L. H. (2018). Spatiotemporal patterns of overlap between short-finned pilot whales and the US pelagic longline fishery in the Mid-Atlantic Bight: An assessment to inform the management of fisheries bycatch. Fisheries Research, 208, 309-320.

Röhr, M. E., Holmer, M., Baum, J. K., Björk, M., Chin, D., Chalifour, L., Peterson, B., … & Duffy, J. E. Blue carbon storage capacity of temperate eelgrass (Zostera marina) meadows. Global Biogeochemical Cycles.

Ganetis, S. A., Colle, B. A., Yuter, S. E., & Hoban, N. P. (2018). Environmental Conditions Associated with Observed Snowband Structures within Northeast US Winter Storms. Monthly Weather Review, 146(11), 3675-3690.

Rossby, T., Flagg, C., Chafik, L., Harden, B., & Søiland, H. (2018). A Direct Estimate of Volume, Heat, and Freshwater Exchange Across the Greenland‐Iceland‐Faroe‐Scotland Ridge. Journal of Geophysical Research: Oceans.

Rossby, T., Flagg, C., Chafik, L., Harden, B., & Søiland, H. (2018). A direct estimate of volume, heat and fresh water exchange across the Greenland‐Iceland‐Faroe‐Scotland Ridge. Journal of Geophysical Research: Oceans.

Rossby, T., Flagg, C., Chafik, L., Harden, B., & Søiland, H. (2018). A direct estimate of volume, heat and fresh water exchange across the Greenland‐Iceland‐Faroe‐Scotland Ridge. Journal of Geophysical Research: Oceans.

Griffith, A. W., Shumway, S. E., & Gobler, C. J. (2018). Differential Mortality of North Atlantic Bivalve Molluscs During Harmful Algal Blooms Caused by the Dinoflagellate, Margalefidinium polykrikoides. Estuaries and Coasts, 1-14.

Illingworth, A. J., Battaglia, A., Bradford, J., Forsythe, M., Joe, P., Kollias, P., … & Midthassel, R. (2018). WIVERN: A new satellite concept to provide global in-cloud winds, precipitation and cloud properties. Bulletin of the American Meteorological Society, (2018).

Küchler, N., Kneifel, S., Kollias, P., & Löhnert, U. Revisiting liquid water content retrievals in warm stratified clouds: The modified Frisch. Geophysical Research Letters.

Frisk, M. G., Dolan, T. E., McElroy, A. E., Zacharias, J. P., Xu, H., & Hice, L. A. (2018). Assessing the drivers of the collapse of Winter Flounder: Implications for management and recovery. Journal of Sea Research, 141, 1-13.

Gownaris, N. J., Rountos, K. J., Kaufman, L., Kolding, J., Lwiza, K. M. M., & Pikitch, E. K. (2018). Water level fluctuations and the ecosystem functioning of lakes. Journal of Great Lakes Research.

Hameed, S., Wolfe, C. L., & Chi, L. (2018). Impact of the Atlantic Meridional Mode on Gulf Stream North Wall Position. Journal of Climate, (2018).

Armstrong, C. T., Erdner, D. L., McClelland, J. W., Sanderson, M. P., Anderson, D. M., Gobler, C. J., & Smith, J. L. (2018). Impact of nitrogen chemical form on the isotope signature and toxicity of a marine dinoflagellate. Marine Ecology Progress Series, 602, 63-76.

Ohnemus, D. C., Krause, J. W., Brzezinski, M. A., Collier, J. L., Baines, S. B., & Twining, B. S. (2018). The chemical form of silicon in marine Synechococcus. Marine Chemistry.

Rudd, J. W., Bodaly, R. A., Fisher, N. S., Kelly, C. A., Kopec, D., & Whipple, C. (2018). Fifty years after its discharge, methylation of legacy mercury trapped in the Penobscot Estuary sustains high mercury in biota. Science of The Total Environment, 642, 1340-1352.

Smith L.C., Dheilly, N.M., et al. (2018) Echinodermata: The Complex Immune System in Echinoderms. In: Cooper E. (eds) Advances in Comparative Immunology. Springer, Cham

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Bokuniewicz, H., & Jang, S. G. (2018). Dredging Intensity: A Spatio-Temporal Indicator for Managing Marine Resources. Environmental management, 62(5), 987-994.

Zhang, M., Mariotti, A., Lin, Z., Ramasmamy, V., Lamarque, J., Xie, Z., & Zhu, J. (2018). Coordination to Understand and Reduce Global Model Biases by US and Chinese Institutions. Bulletin of the American Meteorological Society, (2018).

Zheng, C., Kar-Man Chang, E., Kim, H. M., Zhang, M., & Wang, W. (2018). Impacts of the Madden–Julian Oscillation on Storm-Track Activity, Surface Air Temperature, and Precipitation over North America. Journal of Climate, 31(15), 6113-6134.

Thomas, D. M., Lee, C. S., & Fisher, N. S. (2018). Bioaccumulation and trophic transfer of 137 Cs in marine and freshwater plankton. Chemosphere.

Waller R.F., Cleves P.A., Rubio-Brotons M., Woods A., Bender S.J., Edgcomb V., Gann, E.R., Jones, A.C., Teytelman, L., von Dassow, P., Wilhelm, S.W., and Collier, J.L. (2018) Strength in numbers: Collaborative science for new experimental model systems. PLoS Biol 16(7): e2006333. https://doi.org/10.1371/journal.pbio.2006333

Chang, E. K. M. (2018). CMIP5 Projected Change in Northern Hemisphere Winter Cyclones with Associated Extreme Winds. Journal of Climate, (2018).

Young, C. S., Peterson, B. J., & Gobler, C. J. (2018). The Bloom-Forming Macroalgae, Ulva, Outcompetes the Seagrass, Zostera marina, Under High CO 2 Conditions. Estuaries and Coasts, 1-16.

Wirth, C., & Warren, J. D. (2018). Spatial and temporal variation in toadfish (Opsanus tau) and cusk eel (Ophidion marginatum) mating choruses in eelgrass (Zostera marina) beds in a shallow, temperate estuary. Bioacoustics, 1-18.

He, B., Liu, P., Zhu, Y., & Hu, W. (2018). Prediction and predictability of Northern Hemisphere persistent maxima of 500-hPa geopotential height eddies in the GEFS. Climate Dynamics, 1-17.

Li, X., Doherty, A. C., Brownawell, B., & Lara-Martin, P. A. (2018). Distribution and diagenetic fate of synthetic surfactants and their metabolites in sewage-impacted estuarine sediments. Environmental Pollution.

Phillips, J. M., Bricelj, V. M., Mitch, M., Cerrato, R. M., MacQuarrie, S., & Connell, L. B. (2018). Biogeography of resistance to paralytic shellfish toxins in softshell clam, Mya arenaria (L.), populations along the Atlantic coast of North America. Aquatic Toxicology.

Liou, Y. C., Bluestein, H. B., French, M. M., & Wienhoff, Z. B. (2018). Single-Doppler velocity retrieval of the wind field in a tornadic supercell using mobile, phased-array, Doppler radar data. Journal of Atmospheric and Oceanic Technology, (2018).

Witts, J. D., Landman, N. H., Garb, M. P., Boas, C., Larina, E., Rovelli, R., … & Cochran, J. K. (2018). A fossiliferous spherule-rich bed at the Cretaceous–Paleogene (K–Pg) boundary in Mississippi, USA: Implications for the K–Pg mass extinction event in the Mississippi Embayment and Eastern Gulf Coastal Plain. Cretaceous Research.

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Foley, C. M., Hart, T., & Lynch, H. J. (2018). King Penguin populations increase on South Georgia but explanations remain elusive. Polar Biology, 41(6), 1111-1122.

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Feng, H., Qian, Y., Cochran, J. K., Zhu, Q., Heilbrun, C., Li, L., … & Nazareski, E. (2018). Seasonal differences in trace element concentrations and distribution in Spartina alterniflora root tissue. Chemosphere, 204, 359-370.

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Madigan, D. J., Snodgrass, O. E., & Fisher, N. S. (2018). From migrants to mossbacks: tracer-and tag-inferred habitat shifts in the California yellowtail Seriola dorsalis. Marine Ecology Progress Series, 597, 221-230.

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Kramer, B. J., Davis, T. W., Meyer, K. A., Rosen, B. H., Goleski, J. A., Dick, G. J., … & Gobler, C. J. (2018). Nitrogen limitation, toxin synthesis potential, and toxicity of cyanobacterial populations in Lake Okeechobee and the St. Lucie River Estuary, Florida, during the 2016 state of emergency event. PloS one, 13(5), e0196278.

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Erickson, M. J., Colle, B. A., & Charney, J. J. (2018). Evaluation and Postprocessing of Ensemble Fire Weather Predictions over the Northeast United States. Journal of Applied Meteorology and Climatology, 57(5), 1135-1153.

Hardisty, D. S., Lyons, T. W., Riedinger, N., Isson, T. T., Owens, J. D., Aller, R. C., … & Masterson, A. L. (2018). An evaluation of sedimentary molybdenum and iron as proxies for pore fluid paleoredox conditions. American Journal of Science, 318(5), 527-556.

Schwaller, M. R., Lynch, H. J., Tarroux, A., & Prehn, B. (2018). A continent-wide search for Antarctic petrel breeding sites with satellite remote sensing. Remote Sensing of Environment, 210, 444-451.

Madigan, D.J., Li, M., Yin, R., Baumann, H., Snodgrass, O.E., Dewar, H., Krabbenhoft, D.P., Baumann, Z., Fisher, N.S., Balcom, P.H. and Sunderland, E.M., (2018). Mercury stable isotopes reveal influence of foraging depth on mercury concentrations and growth in Pacific bluefin tuna. Environmental science & technology.

Ray, R., Michaud, E., Aller, R. C., Vantrepotte, V., Gleixner, G., Walcker, R., … & Thouzeau, G. The sources and distribution of carbon (DOC, POC, DIC) in a mangrove dominated estuary (French Guiana, South America). Biogeochemistry, 1-25.

Youngflesh, C., Jenouvrier, S., Hinke, J. T., DuBois, L., St Leger, J., Trivelpiece, W. Z., … & Lynch, H. J. (2017). Rethinking ‘normal’: The role of stochasticity in the phenology of a synchronously breeding seabird. Journal of Animal Ecology.

Berdalet, E., Kudela, R., Banas, N. S., Bresnan, E., Burford, M. A., Davidson, K., Gobler, C.J. … & Montresor, M. (2018). GlobalHAB: fostering international coordination on harmful algal bloom research in aquatic systems. Global ecology and oceanography of harmful algal blooms. Springer, Cham, 425-447.

Blanton, B., Dresback, K., Colle, B., Kolar, R., Vergara, H., Hong, Y., … & Wachtendorf, T. (2018). An Integrated Scenario Ensemble-Based Framework for Hurricane Evacuation Modeling: Part 2-Hazard Modeling. Risk analysis: an official publication of the Society for Risk Analysis.

Arora, K., Goff, J. A., Wood, L. J., Flood, R. D., & Christensen, B. (2018). Analysis of hummocky bedforms offshore Fire Island, New York, generated by superstorm Sandy. Continental Shelf Research.

Hornstein, J., Espinosa, E. P., Cerrato, R. M., Lwiza, K. M., & Allam, B. (2018). The influence of temperature stress on the physiology of the Atlantic surfclam, Spisula solidissima. Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology.

Wang, J., Kim, H. M., Chang, E. K., & Son, S. W. Modulation of the MJO and North Pacific Storm Track Relationship by the QBO. Journal of Geophysical Research: Atmospheres.

Yang, F., Luke, E. P., Kollias, P., Kostinski, A. B., & Vogelmann, A. M. (2018). Scaling of drizzle virga depth with cloud thickness for marine stratocumulus clouds. Geophysical Research Letters.

Farhadzadeh, A., Arabi, M. G., & Bokuniewicz, H. (2018). Contribution of seiche to beach profile evolution in eastern Lake Erie. Shore & Beach, 86(2), 19.

Grosvenor, D. P., Sourdeval, O., Zuidema, P., Ackerman, A., Alexandrov, M. D., Bennartz, R., Kollias, P., et al. (2018). Remote sensing of droplet number concentration in warm clouds: A review of the current state of knowledge and perspectives. Reviews of Geophysics, 56, 409–453.

Chia, M. A., Jankowiak, J. G., Kramer, B. J., Goleski, J. A., Huang, I. S., Zimba, P. V., … & Gobler, C. J. (2018). Succession and toxicity of Microcystis and Anabaena (Dolichospermum) blooms are controlled by nutrient-dependent allelopathic interactions. Harmful Algae, 74, 67-77.

Liu, S., Goff, J. A., Flood, R. D., Christensen, B., & Austin Jr, J. A. (2018). Sorted bedforms off Western Long Island, New York, USA: Asymmetrical morphology and twelve‐year migration record. Sedimentology.

Zhu, J., Zeng, X., Zhang, M., Dai, Y., Ji, D., Li, F., … & Song, X. (2018). Evaluation of the New Dynamic Global Vegetation Model in CAS-ESM. Advances in Atmospheric Sciences, 35(6), 659-670.

Ramesh, K., Melzner, F., Griffith, A. W., Gobler, C. J., Rouger, C., Tasdemir, D., & Nehrke, G. (2018). In vivo characterization of bivalve larval shells: a confocal Raman microscopy study. Journal of The Royal Society Interface, 15(141), 20170723.

Lau, Y. T., Gambino, L., Santos, B., Espinosa, E. P., & Allam, B. (2018). Regulation of oyster (Crassostrea virginica) hemocyte motility by the intracellular parasite Perkinsus marinus: A possible mechanism for host infection. Fish & shellfish immunology, 78, 18-25.

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Yu, H., & Zhang, M. (2018). Explaining the Year‐to‐Year Variability of the Eastern Pacific Inter‐Tropical Convergence Zone (ITCZ) in the Boreal Spring. Journal of Geophysical Research: Atmospheres.

O’Leary, B. C., Ban, N. C., Fernandez, M., Friedlander, A. M., García-Borboroglu, P., Golbuu, Y., … Pikitch, E.K. & McCauley, D. J. (2018). Addressing Criticisms of Large-Scale Marine Protected Areas. BioScience.

Wirth, V., Riemer, M., Chang, E. K., & Martius, O. (2018). Rossby Wave Packets on the Midlatitude Waveguide—A Review. Monthly Weather Review, (2018).

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Hartman, R., Espinosa, E. P., & Allam, B. (2018). Identification of clam plasma proteins that bind its pathogen Quahog Parasite Unknown. Fish & Shellfish Immunology, 77, 214-221.

Davidson, R. A., Nozick, L. K., Wachtendorf, T., Blanton, B., Colle, B., Kolar, R. L., … & Leonardo, N. (2018). An Integrated Scenario Ensemble‐Based Framework for Hurricane Evacuation Modeling: Part 1—Decision Support System. Risk analysis.

Zhang, D., Wang, Z., Kollias, P., Vogelmann, A. M., Yang, K., & Luo, T. (2018). Ice particle production in mid-level stratiform mixed-phase clouds observed with collocated A-Train measurements. Atmospheric Chemistry and Physics, 18(6), 4317-4327.

Wang, W., Lee, C., & Primeau, F. (2018). Inferring particle dynamics in the Mediterranean Sea from in-situ pump POC and chloropigment data using Bayesian statistics. Biogeosci. Discuss.

Erickson, M. J., Colle, B. A., & Charney, J. J. (2018). Evaluation and Post-Processing of Ensemble Fire Weather Predictions over the Northeast United States. Journal of Applied Meteorology and Climatology, (2018).

Segre, P. S., Bocconcelli, A., Hickmott, L. S., Howes, G., Warren, J. D., & Chiang, G. (2018). Offshore hummingbird sightings in Chilean Patagonia. The Wilson Journal of Ornithology, 130(3), 796-799.

Gobler, C. J., Merlo, L. R., Morrell, B. K., & Griffith, A. W. (2018). Temperature, Acidification, and Food Supply Interact to Negatively Affect the Growth and Survival of the Forage Fish, Menidia beryllina (Inland Silverside), and Cyprinodon variegatus (Sheepshead Minnow). Frontiers in Marine Science, 5, 86.

Urmy, S. S., & Warren, J. D. (2018). Foraging hotspots of common and roseate terns: the influence of tidal currents, bathymetry, and prey density. Marine Ecology Progress Series, 590, 227-245.

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Wang, J., Kim, H.-M. & Chang, E. K. M. (2018). Interannual Modulation of Northern Hemisphere Winter Storm Tracks by the QBO. Geophysical Research Letters, 45. https://doi.org/10.1002/2017GL076929

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Lau, Y. T., Gambino, L., Santos, B., Espinosa, E. P., & Allam, B. (2018). Transepithelial migration of mucosal hemocytes in Crassostrea virginica and potential role in Perkinsus marinus pathogenesis. Journal of invertebrate pathology, 153, 122-129.

Wing, A. A., Reed, K. A., Satoh, M., Stevens, B., Bony, S., & Ohno, T. (2018). Radiative–convective equilibrium model intercomparison project. Geoscientific Model Development, 11(2), 793.

Oue, M., Kollias, P., Ryzhkov, A., & Luke, E. P. (2018). Toward Exploring the Synergy Between Cloud Radar Polarimetry and Doppler Spectral Analysis in Deep Cold Precipitating Systems in the Arctic. Journal of Geophysical Research: Atmospheres.

Gobler, C. J., Merlo, L. R., Morell, B. K., & Griffith, A. W. (2018). Temperature, acidification, and food supply interact to negatively affect the growth and survival of the forage fish, Menidia beryllina (inland silverside) and Cyprinodon variegatus (sheepshead minnow). Frontiers in Marine Science, 5, 86.

Wehner, M. F., Reed, K. A., Loring, B., Stone, D., & Krishnan, H. (2018). Changes in tropical cyclones under stabilized 1.5 and 2.0° C global warming scenarios as simulated by the Community Atmospheric Model under the HAPPI protocols. Earth System Dynamics, 9(1), 187.

Isaacman-VanWertz, G., Massoli, P., O’Brien, R., Lim, C., Franklin, J.P., Moss, J.A., Hunter, J.F., Nowak, J.B., Canagaratna, M.R., Misztal, P.K., Su, L., Knopf, D.A., and Arata, C.,  (2018). Chemical evolution of atmospheric organic carbon over multiple generations of oxidation. Nature Chemistry, p.1.

Dvarskas, A. (2018). Mapping ecosystem services supply chains for coastal Long Island communities: Implications for resilience planning. Ecosystem Services, 30, 14-26.

Shipley, O. N., Murchie, K. J., Frisk, M. G., O’Shea, O. R., Winchester, M. M., Brooks, E. J., … & Power, M. Trophic niche dynamics of three nearshore benthic predators in The Bahamas. Hydrobiologia, 1-12.

Madigan, D. J., Baumann, Z., Carlisle, A. B., Snodgrass, O., Dewar, H., & Fisher, N. S. (2018). Isotopic insights into migration patterns of Pacific bluefin tuna in the eastern Pacific Ocean. Canadian Journal of Fisheries and Aquatic Sciences, (999), 1-11.

Pochron, S., Nikakis, J., Illuzzi, K. et al. (2018). Exposure to aged crumb rubber reduces survival time during a stress test in earthworms (Eisenia fetida). Environ Sci Pollut Res (2018). https://doi.org/10.1007/s11356-018-1433-4

Espinosa, E. P., & Allam, B. (2018). Reverse genetics demonstrate the role of mucosal C-type lectins in food particle selection in the oyster Crassostrea virginica. Journal of Experimental Biology, jeb-174094.

Herrington, A. R., & Reed, K. A. (2018). An Idealized Test of the Response of the Community Atmosphere Model to Near‐Grid‐Scale Forcing Across Hydrostatic Resolutions. Journal of Advances in Modeling Earth Systems, 10(2), 560-575.

Grzelak, K., Tamborski, J., Kotwicki, L., & Bokuniewicz, H. (2018). Ecostructuring of marine nematode communities by submarine groundwater discharge. Marine Environmental Research, 136, 106-119.

Schrimpf, M., Naveen, R., & Lynch, H. J. (2018). Population status of the Antarctic shag Phalacrocorax (atriceps) bransfieldensis. Antarctic Science, 1-9.

Lucca, B. M., & Warren, J. D. (2018). Acoustically Measured Distribution and Abundance of Atlantic Menhaden (Brevoortia tyrannus) in a Shallow Estuary in Long Island, NY. Estuaries and Coasts, 1-12.

Smirnov, O., Steinwand, M. C., Xiao, T., & Zhang, M. (2018). Climate Impacts, Political Institutions, and Leader Survival: Effects of Droughts and Flooding Precipitation. Economics of Disasters and Climate Change, 1-21.

Alexander, M. A., Scott, J. D., Friedland, K. D., Mills, K. E., Nye, J. A., Pershing, A. J., & Thomas, A. C. (2018). Projected sea surface temperatures over the 21st century: Changes in the mean, variability and extremes for large marine ecosystem regions of Northern Oceans. Elem Sci Anth, 6(1), 9. DOI: http://doi.org/10.1525/elementa.191

Dasgupta, S., Choyke, S., Ferguson, P. L., & McElroy, A. E. (2018). Antioxidant responses and oxidative stress in sheepshead minnow larvae exposed to Corexit 9500® or its component surfactant, DOSS. Aquatic Toxicology, 194, 10-17.

Zhang, Y., Xie, S., Klein, S. A., Marchand, R., Kollias, P., Clothiaux, E. E., … & Tang, S. (2018). The ARM Cloud Radar Simulator for Global Climate Models: A New Tool for Bridging Field Data and Climate Models. Bulletin of the American Meteorological Society, (2017).

Knopf, D. A., Alpert, P. A., Wang, B., The Role of Organic Aerosol in Atmospheric Ice Nucleation: A Review. ACS Earth Space Chem., Article ASAP DOI: 10.1021/acsearthspacechem.7b00120.

Hattenrath-Lehmann, T. K., Lusty, M. W., Wallace, R. B., Haynes, B., Wang, Z., Broadwater, M., … Chytalo, K. & Gobler, C. J. (2018). Evaluation of Rapid, Early Warning Approaches to Track Shellfish Toxins Associated with Dinophysis and Alexandrium Blooms. Marine Drugs, 16(1), 28.

Zhou, X., Ackerman, A. S., Fridlind, A. M., & Kollias, P. (2018). Simulation of mesoscale cellular convection in marine stratocumulus. Part I: Drizzling conditions. Journal of the Atmospheric Sciences, (2017).

Flanagan, A. M., Flood, R. D., Frisk, M. G., Garza, C. D., Lopez, G. R., Maher, N. P. & Cerrato, R. M. (2018). The relationship between observational scale and explained variance in benthic communities. PLoS ONE, 13(1), e0189313.

Chen, J., Liu, Y., Zhang, M., & Peng, Y. (2018). Height Dependency of Aerosol‐Cloud Interaction Regimes. Journal of Geophysical Research: Atmospheres, 123(1), 491-506.

Korfe, N. G., & Colle, B. A. (2018). Evaluation of Cool-Season Extratropical Cyclones in a Multimodel Ensemble for Eastern North America and the Western Atlantic Ocean. Weather and Forecasting, 33(1), 109-127.

Gurr, S. J., Goleski, J., Lima, F. P., Seabra, R., Gobler, C. J., & Volkenborn, N. (2018). Cardiac responses of the bay scallop Argopecten irradians to diel-cycling hypoxia. Journal of Experimental Marine Biology and Ecology, 500, 18-29.

Rémillard, J., Fridlind, A. M., Ackerman, A. S., Tselioudis, G., Kollias, P., Mechem, D. B., … & Chuang, P. Y. (2017). Use of cloud radar Doppler spectra to evaluate stratocumulus drizzle size distributions in large-eddy simulations with size-resolved microphysics. Journal of Applied Meteorology and Climatology, 56(12), 3263-3283.

Chen, J., Liu, Y., Zhang, M., & Peng, Y. (2017). Height Dependency of Aerosol‐Cloud Interaction Regimes. Journal of Geophysical Research: Atmospheres.

Snelgrove, P.V., Soetaert, K., Solan, M., Thrush, S., Wei, C.L., Danovaro, R., Fulweiler, R.W., Kitazato, H., Ingole, B., Norkko, A., Parkes, R.J. and Volkenborn, N., (2017). Global Carbon Cycling on a Heterogeneous Seafloor. Trends in ecology & evolution.

Suter EA, Pachiadaki MG, Taylor GT, Astor Y, Edgcomb VP. (2017) Free-living chemoautotrophic and particle-attached heterotrophic prokaryotes dominate microbial assemblages along a pelagic marine redox gradient. Environ Microbiol, doi:10.1111/1462-2920.13997.

Thorne, L. H., Foley, H. J., Baird, R. W., Webster, D. L., Swaim, Z. T., & Read, A. J. (2017). Movement and foraging behavior of short-finned pilot whales in the Mid-Atlantic Bight: importance of bathymetric features and implications for management. Marine Ecology Progress Series, 584, 245-257.

Berdalet, E., R. Kudela, E. Urban, H. Enevoldsen, N.S. Banas, E. Bresnan, M. Burford, K. Davidson, C.J. Gobler, B. Karlson, P.T. Lim, L. Mackenzie, M. Montresor, V.L. Trainer, G. Usup, and K. Yin. 2017. GlobalHAB: A new program to promote international research, observations, and modeling of harmful algal blooms in aquatic systems. Oceanography 30(1):70–81, https://doi.org/10.5670/oceanog.2017.111.

Tamborski, J. J., Cochran, J. K., Heilbrun, C., Rafferty, P., Fitzgerald, P., Zhu, Q., & Salazar, C. (2017). Investigation of pore water residence times and drainage velocities in salt marshes using short-lived radium isotopes. Marine Chemistry, 196, 107-115.

Ullrich, P. A., Jablonowski, C., Kent, J., Lauritzen, P. H., Nair, R., Reed, K. A., … & Konor, C. (2017). DCMIP2016: a review of non-hydrostatic dynamical core design and intercomparison of participating models. Geoscientific Model Development, 10(12), 4477.

Baumann, H., & Nye, J. (2017). Fatty acid profiles of M. menidia females and their unfertilized eggs.

Baumann, H., & Nye, J. (2017). Survival, length, and growth responses of M. menidia offspring from different females exposed to contrasting CO2 environments.

Riaz, S. M., Iqbal, M. J., & Hameed, S. (2017). Impact of the North Atlantic Oscillation on winter climate of Germany. Tellus A: Dynamic Meteorology and Oceanography, 69(1), 1406263.

Dasgupta, S., Choyke, S., Ferguson, P. L., & McElroy, A. E. (2018). Antioxidant responses and oxidative stress in sheepshead minnow larvae exposed to Corexit 9500® or its component surfactant, DOSS. Aquatic Toxicology, 194, 10-17.

Korfe, N. G., & Colle, B. A. (2017). Evaluation of Cool-Season Extratropical Cyclones in a Multi-Model Ensemble for Eastern North America and the Western Atlantic Ocean. Weather and Forecasting, (2017).

Alldred, M., Liberti, A., & Baines, S. B. (2017). Impact of salinity and nutrients on salt marsh stability. Ecosphere, 8(11).

Saraf, S. R., Frenkel, A., Harke, M. J., Jankowiak, J. G., Gobler, C. J., & McElroy, A. E. (2017). Effects of Microcystis on development of early life stage Japanese medaka (Oryzias latipes): Comparative toxicity of natural blooms, cultured Microcystis and microcystin-LR. Aquatic Toxicology.

GOBLER, C. J. (2017). PDD BASED ON THE FINAL ENVIRONMENTAL IMPACT STATEMENT.

Zhou, X., & Khairoutdinov, M. F. (2017). Changes in Temperature and Precipitation Extremes in Superparameterized CAM in Response to Warmer SSTs. Journal of Climate, 30(24), 9827-9845.

Lau, Y. T., Sussman, L., Espinosa, E. P., Katalai, S., & Allam, B. (2017). Characterization of hemocytes from different body fluids of the eastern oyster Crassostrea virginica. Fish & Shellfish Immunology 71: 372-379

Zarnoch, C. B., Hoellein, T. J., Furman, B. T., & Peterson, B. J. (2017). Eelgrass meadows, Zostera marina (L.), facilitate the ecosystem service of nitrogen removal during simulated nutrient pulses in Shinnecock Bay, New York, USA. Marine Pollution Bulletin, 124(1), 376-387.

Gobler, C. J., Hattenrath-Lehmann, T. K., Doherty, O. M., Griffith, A. W., Kang, Y., & Litaker, R. W. (2017). Reply to Dees et al.: Ocean warming promotes species-specific increases in the cellular growth rates of harmful algal blooms. Proceedings of the National Academy of Sciences, 201715749.

Fratantoni, D. M., O’Brien, J. K., Flagg, C., & Rossby, T. (2017). AXIS–an Autonomous eXpendable Instrument System. Journal of Atmospheric and Oceanic Technology, (2017).

Fryer, P., Wheat, G., Williams, T., and the Expedition 366 Scientists, 2017. Expedition 366 Preliminary Report: Mariana Convergent Margin and South Chamorro Seamount. International Ocean Discovery Program. https://doi.org/10.14379/iodp.pr.366.2017

Chavas, D. R., K. A. Reed and J. A. Knaff (2017), Physical understanding of the tropical cyclone wind-pressure relationship, Nature Communications, 8, 1360, doi: 10.1038/s41467-017-01546-9

Küchler, N., Kneifel, S., Löhnert, U., Kollias, P., Czekala, H., & Rose, T. (2017). A W-Band Radar–Radiometer System for Accurate and Continuous Monitoring of Clouds and Precipitation. Journal of Atmospheric and Oceanic Technology, 34(11), 2375-2392.

Zhang, Z., & Colle, B. A. (2017). Changes in Extratropical Cyclone Precipitation and Associated Processes During the 21st Century over Eastern North America and the Western Atlantic Using a Cyclone-Relative Approach. Journal of Climate, (2017).

Zhou, X., Ackerman, A. S., Fridlind, A. M., Wood, R., & Kollias, P. (2017). Impacts of solar-absorbing aerosol layers on the transition of stratocumulus to trade cumulus clouds. Atmospheric Chemistry and Physics, 17(20), 12725-12742.

Xu, H., Miller, T. J., Hameed, S., Alade, L. A., & Nye, J. A. Evaluating the utility of the Gulf Stream Index for predicting recruitment of Southern New England‐Mid Atlantic yellowtail flounder. Fisheries Oceanography. DOI: 10.1111/fog.12236

Zhou, Y., & Kim, H. M. (2017). Prediction of atmospheric rivers over the North Pacific and its connection to ENSO in the North American multi-model ensemble (NMME). Climate Dynamics, 1-15.

Xu, N., Wang, M., Tang, Y., Zhang, Q., Duan, S., & Gobler, C. J. (2017). Acute toxicity of the cosmopolitan bloom-forming dinoflagellate Akashiwo sanguinea to finfish, shellfish, and zooplankton. Aquatic Microbial Ecology, 80(3), 209-222.

Astor, Y.M., Lorenzoni, L., Guzman, L., Fuentes, G., Muller-Karger, F., Varela, R., Scranton, M., Taylor, G.T. and Thunell, R., 2017. Distribution and variability of the dissolved inorganic carbon system in the Cariaco Basin, Venezuela. Marine Chemistry, 195, 15-26.

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Tang, T., Filippino, K. C., Liu, Z., Mulholland, M. R., & Lee, C. (2017). Peptide hydrolysis and uptake of peptide hydrolysis products in the James River estuary and lower Chesapeake Bay. Marine Chemistry.

Zhang, Y., Klein, S. A., Fan, J., Chandra, A. S., Kollias, P., Xie, S., & Tang, S. (2017). Large-eddy simulation of shallow cumulus over land: A composite case based on ARM long-term observations at its Southern Great Plains site. Journal of the Atmospheric Sciences, (2017).

Kang, Y., & Gobler, C. J. (2017). The brown tide algae, Aureococcus anophagefferens and Aureoumbra lagunensis (Pelagophyceae), allelopathically inhibit the growth of competing microalgae during harmful algal blooms. Limnology and Oceanography.

Lin, Y., Dong, W., Zhang, M., Xie, Y., Xue, W., Huang, J., & Luo, Y. (2017). Causes of model dry and warm bias over central US and impact on climate projections. Nature Communications, 8.

Thickman, J. D., & Gobler, C. J. (2017). The ability of algal organic matter and surface runoff to promote the abundance of pathogenic and non-pathogenic strains of Vibrio parahaemolyticus in Long Island Sound, USA. PloS one, 12(10), e0185994.

Bowman, M. J., Yaro, R., & Golden, W. B. Regional Storm Surge Planning for Metro New York/New Jersey. In International Conference on Sustainable Infrastructure 2017 (pp. 336-347).

Liu, P., Zhu, Y., Zhang, Q., Gottschalck, J., Zhang, M., Melhauser, C., Li, W., Guan, H., Zhou, X., Hou, D. and Peña, M., (2017). Climatology of tracked persistent maxima of 500-hPa geopotential height. Climate Dynamics, pp.1-17.

Ling, J., Kegelmeyer, W. P., Aditya, K., Kolla, H., Reed, K. A., Shead, T. M., & Davis, W. L. (2017, October). Using feature importance metrics to detect events of interest in scientific computing applications. In 2017 IEEE 7th Symposium on Large Data Analysis and Visualization (LDAV) (pp. 55-63). IEEE.

Leonardo, N. M., & Colle, B. A. (2017). Verification of Multimodel Ensemble Forecasts of North Atlantic Tropical Cyclones. Weather and Forecasting, 32(6), 2083-2101.

Lee, C. S., & Fisher, N. S. (2017). Bioaccumulation of methylmercury in a marine diatom and the influence of dissolved organic matter. Marine Chemistry.

Dasgupta, S., & McElroy, A. E. (2017). Cytotoxicity and CYP1A inhibition in rainbow trout liver (RTL-W1) cell lines exposed to dispersant Corexit 9500 and its major surfactant components. Toxicology in Vitro, 44, 377-381.

Tinoco, A. I., Furman, B. T., Darnell, K. M., & Peterson, B. J. (2017). Submerged aquatic vegetation, topography and flow characteristics in the upper, tidal Hudson River: Progress toward a predictive habitat model. Aquatic Botany, 142, 53-60.

Fan, S., Knopf, D. A., Heymsfield, A. J., & Donner, L. J. (2017). Modeling of aircraft measurements of ice crystal concentration in the Arctic and a parameterization for mixed-phase cloud. Journal of the Atmospheric Sciences, (2017).

Rahman, S., Aller, R. C., & Cochran, J. K. (2017). The missing silica sink: revisiting the marine sedimentary Si cycle using cosmogenic 32Si. Global Biogeochemical Cycles, 31, 1559-1578.

Lynch, H. J., Foley, C. M., Lynch, M. A., & Thorne, L. H. (2017). Response to Van Norman. BioScience, bix109.

Shipley, O.N., Murchie, K.J., Frisk, M.G., Brooks, E.J., Shea, O.R.O., & Power M. (2017). Low lipid and urea effects and inter-tissue comparisons of stable isotope signatures in three nearshore elasmobranchs. Marine Ecology Progress Series, 579, 233-238.

Kim, H. M., & Kim, B. M. (2017). Relative Contributions of Atmospheric Energy Transport and Sea Ice Loss to the Recent Warm Arctic Winter. Journal of Climate, 30(18), 7441-7450.

Griffith, A. W., & Gobler, C. J. (2017). Transgenerational exposure of North Atlantic bivalves to ocean acidification renders offspring more vulnerable to low pH and additional stressors. Scientific Reports, 7.

Tamborski, J. J., Cochran, J. K., & Bokuniewicz, H. J. (2017). Submarine groundwater discharge driven nitrogen fluxes to Long Island Sound, NY: Terrestrial vs. marine sources. Geochimica et Cosmochimica Acta, 218, 40-57.

Fan, J., Han, B., Varble, A., Morrison, H., North, K., Kollias, P., … & Lin, Y. (2017). Cloud‐resolving model intercomparison of an MC3E squall line case: Part I—Convective updrafts. Journal of Geophysical Research: Atmospheres, 122(17), 9351-9378.

Zhou, X., & Khairoutdinov, M. F. (2017). Changes in Temperature and Precipitation Extremes in Super-parameterized CAM in Response to Warmer SSTs. Journal of Climate, (2017).

North, K. W., Oue, M., Kollias, P., Giangrande, S. E., Collis, S. M., & Potvin, C. K. (2017). Vertical air motion retrievals in deep convective clouds using the ARM scanning radar network in Oklahoma during MC3E. Atmospheric Measurement Techniques, 10(8), 2785.

Hu, Z., Wang, D. P., He, X., Li, M., Wei, J., Pan, D., & Bai, Y. (2017). Episodic surface intrusions in the Yellow Sea during relaxation of northerly winds. Journal of Geophysical Research: Oceans.

Thomas, A. C., Pershing, A. J., Friedland, K. D., Nye, J. A., Mills, K. E., Alexander, M. A., … & Henderson, M. E. (2017). Seasonal trends and phenology shifts in sea surface temperature on the North American northeastern continental shelf. Elem Sci Anth, 5.

Waugh, S., & Aller, R. C. (2017). N 2 production and fixation in deep-tier burrows of Squilla empusa in muddy sediments of Great Peconic Bay. Journal of Sea Research.

Tang, S., Zhang, M., & Xie, S. (2017). Investigating the Dependence of SCM Simulated Precipitation and Clouds on the Spatial Scale of Large‐Scale Forcing at SGP. Journal of Geophysical Research: Atmospheres.

Naeger, A. R., Colle, B. A., & Molthan, A. (2017). Evaluation of Cloud Microphysical Schemes for a Warm Frontal Snowband During the GPM Cold Season Precipitation Experiment (GCPEx). Monthly Weather Review, (2017).

Pikitch, E. K., Boersma, P. D., Boyd, I. L., Conover, D. O., Cury, P., Essington, T. E., … & Plaganyi, E. (2017). The strong connection between forage fish and their predators: A response to Hilborn et al.(2017). Fisheries Research.

Young, C. S., & Gobler, C. J. (2017). The organizing effects of elevated CO2 on competition among estuarine primary producers. Scientific Reports, 7.

McCartain, L. D., Townsend, M., Thrush, S. F., Wethey, D. S., Woodin, S. A., Volkenborn, N., & Pilditch, C. A. (2017). The effects of thin mud deposits on the behaviour of a deposit-feeding tellinid bivalve: implications for ecosystem functioning. Marine and Freshwater Behaviour and Physiology, 50(4), 239-255.

Wehrmann, L.M., Riedinger, N., Brunner, B., Kamyshny Jr., A., Hubert, C.R.J., Herbert, L.C., Brüchert, V., Jørgensen, B.B., Ferdelman, T.G., Formolo M.J., 2017. Iron-controlled oxidative sulfur cycling recorded in the distribution and isotopic composition of sulfur species in glacially influenced fjord sediments of west Svalbard. Chemical Geology 466, 678-695.

Mao, X., Waugh, S., Langlois, K., Collier, J.L., Price, R., Garvey, J., Gobler, C. and Walker, H., 2017. Nitrogen transformations and microbial characterization in passive nitrogen removing biofilters (NRBs) for onsite wastewater treatment. Proceedings of the Water Environment Federation, 2017(15), pp.898-906.

Bond, M. E., Valentin-Albanese, J., Babcock, E. A., Abercrombie, D., Lamb, N. F., Miranda, A., Pikitch, E.K. & Chapman, D. D. (2017). Abundance and size structure of a reef shark population within a marine reserve has remained stable for more than a decade. Marine Ecology Progress Series, 576, 1-10.

Narenpitak, P., Bretherton, C. S., & Khairoutdinov, M. F. (2017). Cloud and circulation feedbacks in a near‐global aquaplanet cloud‐resolving model. Journal of Advances in Modeling Earth Systems.

Sollich, M; Yoshinaga, M.Y.; Häusler, S; Price, R.E.; Hinrichs, K-U; Bühring, S.I. (2017). Heat stress dictates microbial lipid composition along a thermal gradient in marine sediments. Frontiers in Microbiology.

J. Yu, R. E. Wilson and C. N. Flagg 2017 A Hydraulic Model for Multiple-Bay-Inlet Systems onBarrier Islands. Estuaries and Coasts DOI 10.1007/s12237-017-0294-2

Taylor GT, Suter EA, Li ZQ, Chow S, Stinton D, Zaliznyak T and Beaupré SR (2017) Single-Cell Growth Rates in Photoautotrophic Populations Measured by Stable Isotope Probing and Resonance Raman Microspectrometry. Front. Microbiol. 8:1449. doi: 10.3389/fmicb.2017.01449

Li, Y., & Zhang, M. (2017). The Role of Shallow Convection over the Tibetan Plateau. Journal of Climate, 30(15), 5791-5803.

Hattenrath-Lehmann, T. K., & Gobler, C. J. (2017). Identification of unique microbiomes associated with harmful algal blooms caused by Alexandrium fundyense and Dinophysis acuminata. Harmful Algae, 68, 17-30.

Bond, M. E., Valentin-Albanese, J., Babcock, E. A., Abercrombie, D., Lamb, N. F., Miranda, A., Pikitch, E.K. & Chapman, D. D. (2017). Abundance and size structure of a reef shark population within a marine reserve has remained stable for more than a decade. Marine Ecology Progress Series, 576, 1-10.

Kim, H. M. (2017). The impact of the mean moisture bias on the key physics of MJO propagation in the ECMWF reforecast. Journal of Geophysical Research: Atmospheres, 122(15), 7772-7784.

Zhang, Z., & Colle, B. A. (2017). Changes in Extratropical Cyclone Precipitation and Associated Processes During the 21st Century over Eastern North America and the Western Atlantic Using a Cyclone-Relative Approach. Journal of Climate, (2017).

Collier, J. L., Geraci-Yee, S., Lilje, O., & Gleason, F. H. (2017). Possible impacts of zoosporic parasites in diseases of commercially important marine mollusc species: part II. Labyrinthulomycota. Botanica Marina, 60(4), 409-417.

Gleason, F. H., Lilje, O., Dang, C., Geraci-Yee, S., & Collier, J. L. (2017). Possible impacts of zoosporic parasites in diseases of commercially important marine mollusc species: part I. Perkinsozoa. Botanica Marina, 60(4), 401-408.

Dheilly NM, Bolnick D, Bordenstein S, Brindley PJ, Figueres C, Holmes EC, Martinez Martinez J, Phillips AJ, Poulin R, Rosario K (2017). Parasite Microbiome Project: Systematic investigation of microbiome dynamics within and across parasite-host interactions mSystems 2(4)

McDowall, P., & Lynch, H. J. (2017). The importance of topographically corrected null models for analyzing ecological point processes. Ecology.

Madigan, D. J., Baumann, Z., Snodgrass, O. E., Dewar, H., Berman-Kowalewski, M., Weng, K. C., … & Fisher, N. S. (2017). Assessing Fukushima-derived radiocesium in migratory Pacific predators. Environmental Science & Technology, 51(16), 8962-8971.

Scott, R. C., Lubin, D., Vogelmann, A. M., & Kato, S. (2017). West Antarctic Ice Sheet cloud cover and surface radiation budget from NASA A-train satellites. Journal of Climate, 30(16), 6151-6170.

Rountos, K. J., Gobler, C. J., & Pikitch, E. K. (2017). Ontogenetic Differences in Swimming Behavior of Fish Exposed to the Harmful Dinoflagellate Cochlodinium polykrikoides. Transactions of the American Fisheries Society, 146(5), 1081-1091.

Zhou, X., Heus, T., & Kollias, P. (2017). Influences of Drizzle on Stratocumulus Cloudiness and Organization. Journal of Geophysical Research: Atmospheres.

Monastero, R. N., Karimi, R., Nyland, J. F., Harrington, J., Levine, K., & Meliker, J. R. (2017). Mercury exposure, serum antinuclear antibodies, and serum cytokine levels in the Long Island Study of Seafood Consumption: A cross-sectional study in NY, USA. Environmental Research, 156, 334-340.

Parishani, H., Pritchard, M. S., Bretherton, C. S., Wyant, M. C., & Khairoutdinov, M. (2017). Toward low cloud‐permitting cloud superparameterization with explicit boundary layer turbulence. Journal of Advances in Modeling Earth Systems.

Henderson, M. E., Mills, K. E., Thomas, A. C., Pershing, A. J., & Nye, J. A. Effects of spring onset and summer duration on fish species distribution and biomass along the Northeast United States continental shelf. Reviews in Fish Biology and Fisheries, 1-14.

Kang, Y., Kudela, R. M., & Gobler, C. J. Quantifying nitrogen assimilation rates of individual phytoplankton species and plankton groups during harmful algal blooms via sorting flow cytometry. Limnology and Oceanography: Methods.

Tridon, F., Battaglia, A., Luke, E., & Kollias, P. (2017). Rain retrieval from dual‐frequency radar Doppler spectra: validation and potential for a midlatitude precipitating case‐study. Quarterly Journal of the Royal Meteorological Society, 143(704), 1364-1380.

Taylor, D. (2017) Palm Up, Palm Down. San Antonio, TX: Wings Press.

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Nicolas, J. P., Vogelmann, A. M., Scott, R. C., Wilson, A. B., Cadeddu, M. P., Bromwich, D. H., … & Powers, H. H. (2017). January 2016 extensive summer melt in West Antarctica favoured by strong El Niño. Nature communications, 8, ncomms15799.

Melnychuk, M. C., Dunton, K. J., Jordaan, A., McKown, K. A., & Frisk, M. G. (2017). Informing conservation strategies for the endangered Atlantic sturgeon using acoustic telemetry and multi‐state mark–recapture models. Journal of Applied Ecology, 54(3), 914-925.

Miller, C., Karimi, R., Zhang, Q., Yang, J., & Meliker, J. (2017). Mercury, eicosapentanoic acid and docosahexaenoic acid demonstrate limited effect on plasma paraoxonase-1 activity and blood pressure among avid seafood consumers in the Long Island Study of Seafood Consumption, NY, USA. International journal of hygiene and environmental health, 220(2), 373-377.

Isaacman-VanWertz, G., Massoli, P., O’Brien, R.E., Nowak, J.B., Canagaratna, M.R., Jayne, J.T., Worsnop, D.R., Su, L., Knopf, D.A., Misztal, P.K. and Arata, C., (2017). Using advanced mass spectrometry techniques to fully characterize atmospheric organic carbon: current capabilities and remaining gaps. Faraday Discussions.

Acquistapace, C., Kneifel, S., Löhnert, U., Kollias, P., Maahn, M., & Bauer-Pfundstein, M. (2017). Optimizing observations of drizzle onset with millimeter-wavelength radars. Atmospheric Measurement Techniques, 10(5), 1783-1802.

Chen, J., Pycke, B. F., Brownawell, B. J., Kinney, C. A., Furlong, E. T., Kolpin, D. W., & Halden, R. U. (2017). Occurrence, temporal variation, and estrogenic burden of five parabens in sewage sludge collected across the United States. Science of The Total Environment, 593, 368-374.

Rosen, B. H., Davis, T. W., Gobler, C. J., Kramer, B. J., & Loftin, K. A. (2017). Cyanobacteria of the 2016 Lake Okeechobee and Okeechobee Waterway harmful algal bloom (No. 2017-1054). US Geological Survey.

Price, R.E., and Giovannelli, D. 2017. A Review of the Geochemistry and Microbiology of Marine Shallow-Water Hydrothermal Vents, Reference Module in Earth Systems and Environmental Sciences, Elsevier, 2017. 30-May-17. doi: 10.1016/B978-0-12-409548-9.09523-3.

Yang, K., Davidson, R. A., Nozick, L. K., Blanton, B., & Colle, B. (2017). Scenario-Based Hazard Trees for Depicting Resolution of Hurricane Uncertainty over Time. Natural Hazards Review, 18(3), 04017001.

Brzezinski, M. A., Krause, J. W., Baines, S. B., Collier, J. L., & Ohnemus, D. C. (2017). Patterns and regulation of silicon accumulation in Synechococcus spp. Journal of Phycology.

Farhadzadeh, A. (2017). A study of Lake Erie seiche and low frequency water level fluctuations in the presence of surface ice. Ocean Engineering, 135, 117-136.

Rider, T. (2017). Review of Between Stony Brook Harbor Tides: The Natural History of a Long Island Pocket Bay by R. Lawrence Swanson and Malcolm J. Bowman. Long Island History Journal, Vol 26-1

Swanson, R. L., Wilson, R., Brownawell, B., & Willig, K. (2017). Environmental consequences of the flooding of the Bay Park Sewage Treatment Plant during Superstorm Sandy. Marine Pollution Bulletin.

Lee, C. S., & Fisher, N. S. (2017). Bioaccumulation of methylmercury in a marine copepod. Environmental toxicology and chemistry, 36(5), 1287-1293.

Mahmoudi, N., Beaupré, S. R., Steen, A. D., & Pearson, A. (2017). Sequential bioavailability of sedimentary organic matter to heterotrophic bacteria. Environmental Microbiology.

Narenpitak, P., Bretherton, C. S., & Khairoutdinov, M. F. (2017). Cloud and circulation feedbacks in a near‐global aquaplanet cloud‐resolving model. Journal of Advances in Modeling Earth Systems.

Krause, J. W., Brzezinski, M. A., Baines, S. B., Collier, J. L., Twining, B. S., & Ohnemus, D. C. (2017). Picoplankton contribution to biogenic silica stocks and production rates in the Sargasso Sea. Global Biogeochemical Cycles.

Jackson, L. J., Furman, B. T., & Peterson, B. J. (2017). Morphological response of Zostera marina reproductive shoots to fertilized porewater. Journal of Experimental Marine Biology and Ecology, 489, 1-6.

Aller, J. Y., Radway, J. C., Kilthau, W. P., Bothe, D. W., Wilson, T. W., Vaillancourt, R. D., … & Knopf, D. A. (2017). Size-resolved characterization of the polysaccharidic and proteinaceous components of sea spray aerosol. Atmospheric Environment, 154, 331-347.

Gobler, C. J., Doherty, O. M., Hattenrath-Lehmann, T. K., Griffith, A. W., Kang, Y., & Litaker, R. W. (2017). Ocean warming since 1982 has expanded the niche of toxic algal blooms in the North Atlantic and North Pacific oceans. Proceedings of the National Academy of Sciences, 201619575. doi:10.1073/pnas.1619575114

Farhadzadeh, A., Hashemi, M. R., & Neill, S. (2017). Characterizing the Great Lakes Hydrokinetic Renewable Energy Resource: Lake Erie Wave, Surge and Seiche Characteristics. Energy.

Suter, E. A., Scranton, M. I., Chow, S., Stinton, D., Medina Faull, L., & Taylor, G. T. (2017). Niskin bottle sample collection aliases microbial community composition and biogeochemical interpretation. Limnology and Oceanography, 62(2), 606-617.

Humphries, G. R. W., Naveen, R., Schwaller, M., Che-Castaldo, C., McDowall, P., Schrimpf, M., & Lynch, H. J. (2017). Mapping Application for Penguin Populations and Projected Dynamics (MAPPPD): data and tools for dynamic management and decision support. Polar Record, 1-7.

Zheng, M., Chang, E.K., Colle, B.A., Luo, Y. and Zhu, Y., 2017. Applying Fuzzy Clustering to a Multimodel Ensemble for US East Coast Winter Storms: Scenario Identification and Forecast Verification. Weather and Forecasting, 32(3), pp.881-903.

Riedinger N, Brunner B, Krastel S, Arnold GL, Wehrmann LM, Formolo MJ, Beck A, Bates SM, Henkel S, Kasten S and Lyons TW (2017) Sulfur cycling in an iron oxide-dominated, dynamic marine depositional system: The Argentine continental margin. Frontiers in Earth Sciences 5:33. doi:10.3389/feart.2017.00033

Farhadzadeh, A., & Gangai, J. (2017). Numerical Modeling of Coastal Storms for Ice-Free and Ice-Covered Lake Erie. Journal of Coastal Research.

Schmidt, S. K., Darcy, J. L., Sommers, P., Gunawan, E., Knelman, J. E., & Yager, K. (2017). Freeze–thaw revival of rotifers and algae in a desiccated, high-elevation (5500 meters) microbial mat, high Andes, Perú. Extremophiles, 1-8.

Roberts, K. J., Colle, B. A., & Korfe, N. (2017). Impact of Simulated Twenty-First-Century Changes in Extratropical Cyclones on Coastal Flooding at the Battery, New York City. Journal of Applied Meteorology and Climatology, 56(2), 415-432.

Painemal, D., Chiu, J. Y. C., Minnis, P., Yost, C., Zhou, X., Cadeddu, M., … & Kollias, P. (2017). Aerosol and cloud microphysics covariability in the northeast Pacific boundary layer estimated with ship‐based and satellite remote sensing observations. Journal of Geophysical Research: Atmospheres, 122(4), 2403-2418.

Cernadas-Martín S, Suter EA, Scranton MI, Astor Y, Taylor GT (2017) Aerobic and anaerobic ammonium oxidizers in the Cariaco Basin: distributions of major taxa and nitrogen species across the redoxcline. Aquat Microb Ecol 79:31-48. https://doi.org/10.3354/ame01817

Foley, C. M., Lynch, M. A., Thorne, L. H., & Lynch, H. J. (2017). Listing Foreign Species under the Endangered Species Act: A Primer for Conservation Biologists. BioScience, bix027.

Chen, J., Pycke, B. F., Brownawell, B. J., Kinney, C. A., Furlong, E. T., Kolpin, D. W., & Halden, R. U. (2017). Occurrence, temporal variation, and estrogenic burden of five parabens in sewage sludge collected across the United States. Science of The Total Environment, 593, 368-374.

Wolfe, C. L., Cessi, P., & Cornuelle, B. D. (2017). An Intrinsic Mode of Interannual Variability in the Indian Ocean. Journal of Physical Oceanography, 47(3), 701-719.

Xie, J., & Zhang, M. (2017). Role of internal atmospheric variability in the 2015 extreme winter climate over the North American continent. Geophysical Research Letters.

Liu, Q., Collier, J. L., & Allam, B. (2017). Seasonality of QPX disease in the Raritan Bay (NY) wild hard clam (Mercenaria mercenaria) population. Aquaculture Research, 48(3), 1269-1278.

Ma, C. G., & Chang, E. K. (2017). Impacts of storm track variations on winter time extreme weather events over the continental US. Journal of Climate, (2017).

China, S., Alpert, P. A., Zhang, B., Schum, S., Dzepina, K., Wright, K., … & Knopf, D. A. (2017). Ice cloud formation potential by free tropospheric particles from long‐range transport over the Northern Atlantic Ocean. Journal of Geophysical Research: Atmospheres.

Guo, Y., Shinoda, T., Lin, J., & Chang, E. K. (2017). Variations of Northern Hemisphere Storm Track and Extratropical Cyclone Activity Associated with the Madden-Julian Oscillation. Journal of Climate, (2017).

Wang, W. L., Lee, C., Cochran, J. K., Primeau, F. W., & Armstrong, R. A. (2017). A novel statistical analysis of chloropigment fluxes to constrain particle exchange and organic matter remineralization rate constants in the Mediterranean Sea. Marine Chemistry, 192, 49-58.

Dvarskas, A. (2017). Dynamically linking economic models to ecological condition for coastal zone management: Application to sustainable tourism planning. Journal of Environmental Management, 188, 163-172.

Yin, H., Zhu, Q., & Aller, R. C. (2017). An irreversible planar optical sensor for multi-dimensional measurements of sedimentary H 2 S. Marine Chemistry.

Herrington, A. R. and K. A. Reed (2017) An explanation for the sensitivity of the Community Atmosphere Model to horizontal resolution on aqua-planets. Journal of Climate. doi: 10.1175/JCLI-D-16-0069.1

Karatayev, A. Y., Burlakova, L. E., & Padilla, D. K. Can introduced species replace lost biodiversity? A test with freshwater molluscs. Hydrobiologia, 1-12.

Hattenrath-Lehmann, T. K., Ossiboff, R. J., Burnell, C. A., Rauschenberg, C. D., Hynes, K., Burke, R. L., … & Gobler, C. J. (2017). The role of a PSP-producing Alexandrium bloom in an unprecedented diamondback terrapin (Malaclemys terrapin) mortality event in Flanders Bay, New York, USA. Toxicon, 129, 36-43.

Tamborski, J. J., Cochran, J. K., & Bokuniewicz, H. J. (2017). Application of 224 Ra and 222 Rn for evaluating seawater residence times in a tidal subterranean estuary. Marine Chemistry. 189: 32–45.

Wehner, M. F., Reed, K. A., & Zarzycki, C. M. (2017). High-Resolution Multi-decadal Simulation of Tropical Cyclones. In Hurricanes and Climate Change (pp. 187-211). Springer International Publishing.

Kasina, M., Bock, S., Würdemann, H., Pudlo, D., Picard, A., Lichtschlag, A., März, C., Wagenknecht, L., Wehrmann, L.M., Vogt, C., Meister, P. (2017) Mineralogical and geochemical analysis of Fe-phases in drill-cores from the Triassic Stuttgart Formation at Ketzin CO2 storage site before CO2 arrival. Environ Earth Sci 76: 161. doi:10.1007/s12665-017-6460-9

McCoy, E., Borrett, S. R., LaPeyre, M. K., & Peterson, B. J. (2017). Estimating the impact of oyster restoration scenarios on transient fish production. Restoration Ecology.

Charnawskas, J. C., Alpert, P. A., Lambe, A., Berkemeier, T., O’Brien, R. E., Massoli, P., … Knopf, D.A. & Davidovits, P. (2017). Condensed-phase biogenic-anthropogenic interactions with implications for cold cloud formation. Faraday Discussions.

Martinez, C. M., Duplisea, D. E., Cerrato, R. M., & Frisk, M. G. (2017). Exploration of Trends in Interspecific Abundance-Occupancy Relationships Using Empirically Derived Simulated Communities. PloS one, 12(1), e0170816.

Colle, B. A., Naeger, A. R., & Molthan, A. (2017). Evolution of an Intense Warm Frontal Precipitation Band During the GPM Cold-Season Precipitation Experiment (GCPEx)

Slade, J. H., Shiraiwa, M., Arangio, A., Su, H., Pöschl, U., Wang, J., & Knopf, D. A. (2017). Cloud droplet activation through oxidation of organic aerosol influenced by temperature and particle phase state. Geophysical Research Letters.

Wang, J., Kim, H. M., & Chang, E. K. (2017). Changes in Northern Hemisphere Winter Storm Tracks under the Background of Arctic Amplification. Journal of Climate, (2017).

Rubin, E., Tanguy, A., Pales Espinosa, E., & Allam, B. (2017). Differential Gene Expression in Five Isolates of the Clam Pathogen, Quahog Parasite Unknown (QPX). Journal of Eukaryotic Microbiology.

Seimon TA, Seimon A, Yager K, Reider K, Delgado A, Sowell P, Tupayachi A, Konecky B, McAloose D, Halloy S. Long-term monitoring of tropical alpine habitat change, Andean anurans, and chytrid fungus in the Cordillera Vilcanota, Peru: Results from a decade of study. Ecology and Evolution;00:1–14

Scoccimarro, E., Fogli, P. G., Reed, K. A., Gualdi, S., Masina, S., & Navarra, A. (2017). Tropical Cyclone Interaction with the Ocean: The Role of High-Frequency (Subdaily) Coupled Processes. Journal of Climate, 30(1), 145-162.

Barrett, B. S., & Hameed, S. (2017). Seasonal Variability in Precipitation in Central and Southern Chile: Modulation by the South Pacific High. Journal of Climate, 30(1), 55-69.

Kim, O. Y., Kim, H. M., Lee, M. I., & Min, Y. M. (2017). Dynamical–statistical seasonal prediction for western North Pacific typhoons based on APCC multi-models. Climate Dynamics, 48(1-2), 71-88.

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Kang, Y., Tang, Y. Z., Taylor, G. T., & Gobler, C. J. (2016). Discovery of a resting stage in the harmful, brown tide‐causing pelagophyte, Aureoumbra lagunensis: a mechanism potentially facilitating recurrent blooms and geographic expansion. Journal of Phycology.

Lee, C. S., Lutcavage, M. E., Chandler, E., Madigan, D. J., Cerrato, R. M., & Fisher, N. S. (2016). Declining Mercury Concentrations in Bluefin Tuna Reflect Reduced Emissions to the North Atlantic Ocean. Environmental Science & Technology.

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Walker, B. D., Beaupré, S. R., Guilderson, T. P., McCarthy, M. D., & Druffel, E. R. M. (2016). Pacific carbon cycling constrained by organic matter size, age and composition relationships. Nature Geoscience.

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Baumann, Z., Mason, R.P., Conover, D.O., Balcom, P., Chen, C.Y., Buckman, K.L., Fisher, N.S. and Baumann, H., 2016. Mercury bioaccumulation increases with latitude in a coastal marine fish (Atlantic silverside, Menidia menidia). Canadian Journal of Fisheries and Aquatic Sciences, (999), pp.1-7.

Wang, C., Baumann, Z., Madigan, D. J., & Fisher, N. S. (2016). Contaminated Marine Sediments As a Source of Cesium Radioisotopes for Benthic Fauna near Fukushima. Environmental Science & Technology, 50(19), 10448-10455.

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Lynch, H. J., White, R., Naveen, R., Black, A., Meixler, M. S., & Fagan, W. F. (2016). In stark contrast to widespread declines along the Scotia Arc, a survey of the South Sandwich Islands finds a robust seabird community. Polar Biology, 1-11.

Finn, D., Chandrasekhar, D. and Xiao, Y. (2016) “Planning for resilience in the New York metro region after Superstorm Sandy” in edited collection Spatial planning and resilience following disasters: International and comparative perspectives, Greiving, Ubaura & Tesliar eds. Bristol: Policy Press. 117-135.

Morse, R. E., Friedland, K. D., Tommasi, D., Stock, C., & Nye, J. (2016). Distinct zooplankton regime shift patterns across ecoregions of the US Northeast continental shelf Large Marine Ecosystem. Journal of Marine Systems.

Yu, H., Zhang, M., Lin, W., & Zhang, X. (2016). Cloud transitions: comparison of temporal variation in the southeastern Pacific with the spatial variation in the northeastern Pacific at low latitudes. International Journal of Climatology.

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Madigan, D. J., Chiang, W. C., Wallsgrove, N. J., Popp, B. N., Kitagawa, T., Choy, C. A., … & Sun, C. L. (2016). Intrinsic tracers reveal recent foraging ecology of giant Pacific bluefin tuna at their primary spawning grounds. Marine Ecology Progress Series, 553, 253-266.

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Stubler, A. D., & Peterson, B. J. Ocean acidification accelerates net calcium carbonate loss in a coral rubble community. Coral Reefs, 1-9.

Chang, E. K., & Yau, A. M. (2016). Northern Hemisphere winter storm track trends since 1959 derived from multiple reanalysis datasets. Climate Dynamics, 47(5-6), 1435-1454.

Colle, B. A., Sienkiewicz, M. J., Archer, C., Veron, D., Veron, F., Kempton, W., & Mak, J. E. (2015). Improving the Mapping and Prediction of Offshore Wind Resources (IMPOWR): Experimental Overview and First Results. Bulletin of the American Meteorological Society, (2015).

Dasgupta, S., Di Giulio, R. T., Drollette, B. D., Plata, D., Brownawell, B. J., & McElroy, A. E. (2016). Hypoxia depresses CYP1A induction and enhances DNA damage, but has minimal effects on antioxidant responses in sheepshead minnow (Cyprinodon variegatus) larvae exposed to dispersed crude oil. Aquatic Toxicology.

Knoll, K., Landman, N. H., Cochran, J. K., Macleod, K. G., & Sessa, J. A. (2016). Microstructural preservation and the effects of diagenesis on the carbon and oxygen isotope composition of Late Cretaceous aragonitic mollusks from the Gulf Coastal Plain and the Western Interior Seaway. American Journal of Science, 316(7), 591-613.

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Moffet, R. C., O’Brien, R. E., Alpert, P., Kelly, S. T., Pham, D. Q., Gilles, M. K., … & Laskin, A. Morphology and Mixing of BC Particles Collected in Central California During the CARES Field Study.

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Uno, S., Kokushi, E., Kawano, M., McElroy, A. E., & Koyama, J. (2016). Toxic evaluations of sediments in Tokyo Bay, Japan, using Japanese medaka embryos. Environmental Science and Pollution Research, 1-8.

Wang, K., Espinosa, E. P., & Allam, B. (2016). Effect of “heat shock” treatments on QPX disease and stress response in the hard clam, Mercenaria mercenaria. Journal of invertebrate pathology, 138, 39-49.

Rodriguez-Mora, M. J., Edgcomb, V. P., Taylor, C., Scranton, M. I., Taylor, G. T., & Chistoserdov, A. Y. (2016). The diversity of sulfide oxidation and sulfate reduction genes expressed by the bacterial communities of the Cariaco Basin, Venezuela. The open microbiology journal, 10, 140.

Patton, E. G., Guenther, A. B., Shepson, P. B., Miller, D. O., Brune, W. H., Misztal, P. K., … & Mak, J. E. (2016). Understanding isoprene photooxidation using observations and modeling over a subtropical forest in the southeastern US. Atmospheric Chemistry and Physics, 16(12), 7725.

Sagarese, S. R., Frisk, M. G., Cerrato, R. M., Sosebee, K. A., Musick, J. A., & Rago, P. J. (2016). Diel Variations in Survey Catch Rates and Survey Catchability of Spiny Dogfish and their Pelagic Prey in the Northeast US Continental Shelf Large Marine Ecosystem. Marine and Coastal Fisheries, 8(1), 244-262.

Bacmeister, J. T., Reed, K. A., Hannay, C., Lawrence, P., Bates, S., Truesdale, J. E., … & Levy, M. (2016). Projected changes in tropical cyclone activity under future warming scenarios using a high-resolution climate model. Climatic Change, 1-14.

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Breece, M. W., Fox, D. A., Dunton, K. J., Frisk, M. G., Jordaan, A., & Oliver, M. J. (2016). Dynamic seascapes predict the marine occurrence of an endangered species: Atlantic Sturgeon Acipenser oxyrinchus oxyrinchus. Methods in Ecology and Evolution.

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Hu, Z., Wang, D. P., Pan, D., He, X., Miyazawa, Y., Bai, Y., … & Gong, F. (2016). Mapping surface tidal currents and Changjiang plume in the East China Sea from Geostationary Ocean Color Imager. Journal of Geophysical Research: Oceans.

Hall, D. M., Ullrich, P. A., Reed, K. A., Jablonowski, C., Nair, R. D., & Tufo, H. M. (2016). Dynamical Core Model Intercomparison Project (DCMIP) tracer transport test results for CAM‐SE. Quarterly Journal of the Royal Meteorological Society, 142(697), 1672-1684.

Urmy, S. S., Williamson, C. E., Leach, T. H., Schladow, S. G., Overholt, E. P., & Warren, J. D. (2016). Vertical redistribution of zooplankton in an oligotrophic lake associated with reduction in ultraviolet radiation by wildfire smoke. Geophysical Research Letters, 43(8), 3746-3753.

Karimi, R., Chen, C. Y., & Folt, C. L. (2016). Comparing nearshore benthic and pelagic prey as mercury sources to lake fish: the importance of prey quality and mercury content. Science of The Total Environment, 565, 211-221.

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Zhang, M., Somerville, R. C., & Xie, S. (2016). The SCM concept and creation of ARM forcing datasets. Meteorological Monographs, 57, 24-1.

Madigan, D.J., Chiang, W.C., Wallsgrove, N.J., Popp, B.N., Kitagawa, T., Choy, C.A., Tallmon, J., Ahmed, N., Fisher, N.S. and Sun, C.L., (2016). Intrinsic tracers reveal recent foraging ecology of giant Pacific bluefin tuna at their primary spawning grounds. Marine Ecology Progress Series, 553, pp.253-266.

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Harke, M. J., Steffen, M. M., Gobler, C. J., Otten, T. G., Wilhelm, S. W., Wood, S. A., & Paerl, H. W. (2016). A review of the global ecology, genomics, and biogeography of the toxic cyanobacterium, Microcystis spp. Harmful Algae, 54, 4-20.

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Wang, L., Han, J., Sundahl, B., Thornton, S., Zhu, Y., Zhou, R., Jaye, C., Liu, H., Li, Z.Q., Taylor, G.T. and Fischer, D.A., 2016. Ligand-induced dependence of charge transfer in nanotube–quantum dot heterostructures. Nanoscale, 8(34), pp.15553-15570.

Thorne, L. H., Conners, M. G., Hazen, E. L., Bograd, S. J., Antolos, M., Costa, D. P., & Shaffer, S. A. (2016). Effects of El Niño-driven changes in wind patterns on North Pacific albatrosses. Journal of The Royal Society Interface, 13(119), 20160196.

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Kalesse, H., Szyrmer, W., Kneifel, S., Kollias, P., & Luke, E. (2016). Fingerprints of a riming event on cloud radar Doppler spectra: observations and modeling. Atmospheric Chemistry and Physics, 16(5), 2997-3012.

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Kim, H. M., Kim, D., Vitart, F., Toma, V. E., Kug, J. S., & Webster, P. J. (2016). MJO Propagation across the Maritime Continent in the ECMWF Ensemble Prediction System. Journal of Climate, 29(11), 3973-3988.

Laskin, A., Gilles, M. K., Knopf, D. A., Wang, B., & China, S. (2016). Progress in the analysis of complex atmospheric particles. Annual Review of Analytical Chemistry, 9, 117-143.

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Chen, C. Y., Ward, D. M., Williams, J. J., & Fisher, N. S. (2016). Metal bioaccumulation by estuarine food webs in New England, USA. Journal of marine science and engineering, 4(2), 41.

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Woodin, S. A., Volkenborn, N., Pilditch, C. A., Lohrer, A. M., Wethey, D. S., Hewitt, J. E., & Thrush, S. F. (2016). Same pattern, different mechanism: Locking onto the role of key species in seafloor ecosystem process. Scientific Reports, 6, 26678.

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Martinez, C. M., Rohlf, F. J., & Frisk, M. G. (2016). Sexual dimorphism in sister species of Leucoraja skate and its relationship to reproductive strategy and life history. Evolution & Development.

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Trammell, J. H., Jiang, X., Li, L., Kao, A., Zhang, G. J., Chang, E. K., & Yung, Y. (2016). Temporal and Spatial Variability of Precipitation from Observations and Models*. Journal of Climate, 29(7), 2543-2555.

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Griffith, A. W., & Gobler, C. J. (2016). Temperature controls the toxicity of the ichthyotoxic dinoflagellate Cochlodinium polykrikoides. MEPS, 545, 63-76.

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Chapperon, C., Volkenborn, N., Clavier, J., Séité, S., Seabra, R., & Lima, F. P. (2016). Exposure to solar radiation drives organismal vulnerability to climate: Evidence from an intertidal limpet. Journal of Thermal Biology, 57, 92-100.

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Wang, K., del Castillo, C., Corre, E., Espinosa, E. P., & Allam, B. (2016). Clam focal and systemic immune responses to QPX infection revealed by RNA-seq technology. BMC genomics, 17(1), 1.

Choi, J., Son, S. W., Ham, Y. G., Lee, J. Y., & Kim, H. M. (2016). Seasonal-to-interannual prediction skills of near-surface air temperature in the CMIP5 decadal hindcast experiments. Journal of Climate, (2016).

Giner, J. L., Ceballos, H., Tang, Y. Z., & Gobler, C. J. (2016). Sterols and Fatty Acids of the Harmful Dinoflagellate Cochlodinium polykrikoides. Chemistry & biodiversity, 13(2), 249-252.

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Espinosa, E. P., Cerrato, R. M., Wikfors, G. H., & Allam, B. (2016). Modeling food choice in the two suspension-feeding bivalves, Crassostrea virginica and Mytilus edulis. Marine Biology, 163(2), 1-13.

Ladino, L.A., Yakobi-Hancock, J.D., Kilthau, W.P., Mason, R.H., Si, M., Li, J., Miller, L.A., Schiller, C.L., Huffman, J.A., Aller, J.Y. and Knopf, D.A., 2016. Addressing the ice nucleating abilities of marine aerosol: A combination of deposition mode laboratory and field measurements. Atmospheric Environment.

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Cahill, A. E., & Levinton, J. S. (2016). Genetic differentiation and reduced genetic diversity at the northern range edge of two species with different dispersal modes. Molecular ecology, 25(2), 515-526.

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Hattenrath-Lehmann, T. K., Zhen, Y., Wallace, R. B., Tang, Y. Z., & Gobler, C. J. (2016). Mapping the distribution of cysts from the toxic dinoflagellate, Cochlodinium polykrikoides, in bloom-prone estuaries using a novel fluorescence in situ hybridization assay. Applied and environmental microbiology, 82 (4):1114-1125; 10.1128/AEM.03457-15 FEB 2016

Liu, P., Zhang, Q., Zhang, C., Zhu, Y., Khairoutdinov, M., Kim, H. M., … & Zhang, M. (2016). A Revised Real-Time Multivariate MJO Index. Monthly Weather Review, 144 (2):627-642; 10.1175/MWR-D-15-0237.1 FEB 2016

Li, Y., & Zhang, M. (2016). Cumulus over the Tibetan Plateau in the Summer Based on CloudSat-CALIPSO Data. Journal of Climate, 29 (3):1219-1230; 10.1175/JCLI-D-15-0492.1 FEB 2016.

Chapman, D. D., Feldheim, K.A., Papastamatiou, Y., Hueter, R.H. There and Back Again: A review of residency and return migrations in sharks, with implications for population structure and management. Annual Reviews in Marine Science (Available online in advance of publication).

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Kessel, S.T., Chapman, D. D., Franks, B. R., Gedamke, T., Gruber, S. H., Newman, M.J., White, E. R., Perkins, R. G. (In Press). Predictable temperature regulated residency, movement and migration in a large, highly-mobile marine predator. Marine Ecology Progress Series.

Alpert, P. A. & Knopf, D. A. (2016). Analysis of isothermal and cooling-rate-dependent immersion freezing by a unifying stochastic ice nucleation model, Atmospheric Chemistry and Physics 16 (4), 2083-2107

Stubler, A. D., A. K. Stevens and B. J. Peterson. 2016. Using community-wide recruitment and succession patterns to assess sediment stress on Jamaican coral reefs. Journal of Experimental Marine Biology and Ecology 474: 29-38.

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Espinosa, E. P., Koller, A., & Allam, B. (2016). Proteomic characterization of mucosal secretions in the eastern oyster, Crassostrea virginica. Journal of proteomics, 132, 63-76. DOI information: 10.1016/j.jprot.2015.11.018

Baines, S.B., X. Chen, S. Vogt, N.S. Fisher, B.S. Twining, and M.R. Landry. In press. Elemental content of single-celled plankton in the Costa Rica Upwelling Dome and mineral limitation of mesozooplankton. Journal of Plankton Research

Baines, S.B., X. Chen, B.S. Twining, N.S. Fisher, and M.R. Landry. In press. Factors affecting Fe and Zn contents of mesozooplankton from the Costa Rica Dome. Journal of Plankton Research

Martinez, C.M., F.J. Rohlf and M.G. Frisk (In Press). Sexual dimorphism in sister species of Leucoraja skate and its relationship to reproductive strategy and life history. Evolution & Development.

Li, H., & Colle, B. A. 2015: Future Changes in Convective Storm Days over the Northeastern United States Using Linear Discriminant Analysis Applied to CMIP5 Predictions. J. Climate. doi: http://dx.doi.org/10.1175/JCLI-D-14-00831.1.

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Pascal, L., Maire, O., Volkenborn, N., Lecroart, P., Bichon, S., de Montaudouin, X., … & Deflandre, B. (2016). Influence of the mud shrimp Upogebia pusilla (Decapoda: Gebiidea) on solute and porewater exchanges in an intertidal seagrass (Zostera noltei) meadow of Arcachon Bay: An experimental assessment. Journal of Experimental Marine Biology and Ecology, 477, 69-79.

Dunton, K. J., Jordaan, A., Secor, D. H., Martinez, C. M., Kehler, T., Hattala, K. A., … & Frisk, M. G. (2016). Age and Growth of Atlantic Sturgeon in the New York Bight. North American Journal of Fisheries Management, 36(1), 62-73.

Trammell, J. H., Jiang, X., Li, L., Kao, A., Zhang, G. J., Chang, E. K., & Yung, Y. (2016). Temporal and Spatial Variability of Precipitation from Observation and Model. Journal of Climate, (2016).

Espinosa, E. P., Cerrato, R. M., Wikfors, G. H., & Allam, B. (2016). Modeling food choice in the two suspension-feeding bivalves, Crassostrea virginica and Mytilus edulis. Marine Biology, 163(2), 1-13.

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Wang, X. H., Wang, D. P., Sun, Z., He, Z., Liu, H., Guan, W., … & Bao, X. (2016). International scientists discuss impact on China’s estuarine and coastal environment by intensive anthropogenic activities–The 2nd workshop on sediment dynamics of muddy coasts and estuaries: Physics, biology and their interactions, Zhoushan, China, 23–26 October, 2015. Estuarine, Coastal and Shelf Science, 168, ii-iii.

Espinosa, E. P., Koller, A., & Allam, B. (2016). Proteomic characterization of mucosal secretions in the eastern oyster, Crassostrea virginica. Journal of proteomics, 132, 63-76.

Wang, K., Espinosa, E. P., Tanguy, A., & Allam, B. (2016). Alterations of the immune transcriptome in resistant and susceptible hard clams (Mercenaria mercenaria) in response to Quahog Parasite Unknown (QPX) and temperature. Fish & shellfish immunology, 49, 163-176.

Stubler, A. D., Stevens, A. K., & Peterson, B. J. (2016). Using community-wide recruitment and succession patterns to assess sediment stress on Jamaican coral reefs. Journal of Experimental Marine Biology and Ecology,474, 29-38.

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Pochron, S. (2016) Monkeys In The Garden Irven DeVore and the Revolution in the Science of Social Behavior. Smashwords.

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Rider, Tara. The Once and Future Queen: The Imagining and Reimagining of Ireland. 2016. New Trails and Beaten Paths in Celtic Studies.

Tang, S., Zhang, M., & Xie, S. (2016). An ensemble constrained variational analysis of atmospheric forcing data and its application to evaluate clouds in CAM5. Journal of Geophysical Research: Atmospheres, 121(1), 33-48.

Yee, A. K., & Padilla, D. K. (2015). Allometric Scaling of the Radula in the Atlantic Slippersnail Crepidula fornicata. Journal of Shellfish Research, 34(3), 903-907.

Bretherton, C. S., & Khairoutdinov, M. F. (2015). Convective self‐aggregation feedbacks in near‐global cloud‐resolving simulations of an aquaplanet. Journal of Advances in Modeling Earth Systems.

Supinie, T. A., Jung, Y., Xue, M., Stensrud, D. J., French, M. M., & Bluestein, H. B. (2015). Impact of VORTEX2 Observations on Analyses and Forecasts of the 5 June 2009 Goshen County, Wyoming, Supercell. Monthly Weather Review, (2015).

Bokuniewicz, H., Cochran, J. K., Garcia-Orellana, J., Rodellas, V., Daniel, J. W., & Heilbrun, C. (2015). Intertidal percolation through beach sands as a source of 224,223 Ra to Long Island Sound, New York, and Connecticut, United States. Journal of Marine Research, 73(5), 123-140.

Baumann, H., Wells, R. J. D., Rooker, J. R., Zhang, S., Baumann, Z., Madigan, D. J., … & Fisher, N. S. (2015). Combining otolith microstructure and trace elemental analyses to infer the arrival of juvenile Pacific bluefin tuna in the California current ecosystem. ICES Journal of Marine Science: Journal du Conseil, 72(7), 2128-2138.

Allam, B., and Raftos, D., Immune responses to infectious diseases in bivalves, Journal of Invertebrate Pathology 131: 121-136, ISSN 0022-2011,http://dx.doi.org/10.1016/j.jip.2015.05.005.

Allam, B., & Espinosa, P. E. (2015, April). The multiple, central, roles of mucosal secretions in marine bivalves. In INTEGRATIVE AND COMPARATIVE BIOLOGY (Vol. 55, pp. E4-E4). JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA: OXFORD UNIV PRESS INC.

McCann, M. J., & Padilla, D. K. (2015). Effects of a patchy food environment across life history stages. Journal of Experimental Marine Biology and Ecology, 472, 135-141.

Alpert, P. A., & Knopf, D. A. (2015). Analysis of isothermal and cooling rate dependent immersion freezing by a unifying stochastic ice nucleation model. Atmospheric Chemistry and Physics Discussions, 15(9), 13109-13166.

Fritts, D. C., Wang, L., Geller, M. A., Lawrence, D. A., Werne, J., & Balsley, B. B. (2015). Numerical Modeling of Multi-Scale Dynamics at a High Reynolds Number: Instabilities, Turbulence, and an Assessment of Ozmidov and Thorpe Scales. Journal of the Atmospheric Sciences, (2015).

Baines, S. B., Chen, X., Twining, B. S., Fisher, N. S., & Landry, M. R. (2015). Factors affecting Fe and Zn contents of mesozooplankton from the Costa Rica Dome. Journal of Plankton Research, fbv098.

Khairoutdinov, M., & Zhou, X. (2015, April). Changes in sub-daily precipitation extremes in a global climate model with super-parameterization under CO2 warming. In EGU General Assembly Conference Abstracts (Vol. 17, p. 7931).

Gribble, M. O., Karimi, R., Feingold, B. J., Nyland, J. F., O’Hara, T. M., Gladyshev, M. I., & Chen, C. Y. (2015). Mercury, selenium and fish oils in marine food webs and implications for human health. Journal of the Marine Biological Association of the United Kingdom, 1-17.

Zhou, X-H, D-P. Wang, and D. Chen, 2015b. Validating satellite altimeter measurements of internal tides with long-term TAO/TRITON buoy observations at 2oS-156oE. Geophy. Res. Lett., 42, doi:10.1002/2015GL063669.

Wang L; Han J, Zhu Y, Zhou R, Jaye C, Liu H, Li Z-Q, Taylor G, Fischer D, Appenzelle, J, Wong SS. 2015. Probing the dependence of electron transfer on size and coverage in carbon nanotube-quantum dot heterostructures. J Phys Chem 119: 26327–26338

Chao Ye, Weihua Qiao, Xiaobin Yu, Xiaojun Ji, He Huang, J. L. Collier, Liming Liu. 2015. Reconstruction and analysis of the genome-scale metabolic model ofschizochytrium limacinum SR21 for docosahexaenoic acid production. BMC Genomics 16 :799 (11pp). DOI 10.1186/s12864-015-2042-y

Mars Brisbin M, McElroy A, Pales Espinosa E, Allam B. 2015. Antimicrobial activity in the cuticle of the American lobster, Homarus americanus. Fish and Shellfish Immunology. 44: 542-546.

Lin, Yanluan Lin, Ming Zhao and Minghua Zhang, 2015: Tropical cyclone rainfall area controlled by relative sea surface temperature, Nature Communications 6, 6591m doi:10.1038/ncomms7591

Ridley, H.E., Y. Asmerom, J.U.L. Baldini, S.F.M. Breitenbach, V.V. Aquino, K.M. Prufer, Brendan J. Culleton, V. Polyak, F.A. Lechleitner, D.J. Kennett, M. Zhang, N. Marwan, C.G. Macpherson, L.M. Baldini, T. Xiao, J.L. Peterkin, J. Awe, G.H. Haug, 2015: Aerosol forcing of the position of the intertropical convergence zone since AD 1550. Nat. Geosci., 8 (2015)http://dx.doi.org/10.1038/ngeo2353

Zhang, M., 2015. Coupled Ocean-Atmosphere Models: Physical Processes. P144-152, In: Gerald R.North (editor-in-chief), John Pyle and Fuqing Zhang (editors). Encyclopedia of Atmospheric Sciences, 2nd edition, Vol 4, pp. 144–152. ISBN: 9780123822253, 2998pp, Copyright © 2015 Elsevier Ltd.

Walcker, R., E. J. Anthony, C. Cassou, R.C. Aller, A. Gardel, C. Proisy, J.-M. Martinez, and F. Fromard, 2015, Fluctuations in the extent of mangroves driven by multi-decadal changes in North Atlantic waves. J. Biogeogr., 42, 2209-2219.

A. J. Illingworth, H. W. Barker, A. Beljaars, M. Ceccaldi, H. Chepfer, N. Clerbaux, J. Cole, J. Delanoë, C. Domenech, D. P. Donovan, S. Fukuda, M. Hirakata, R. J. Hogan, A. Huenerbein, P. Kollias, T. Kubota, T. Nakajima, T. Y. Nakajima, T. Nishizawa, Y. Ohno, H. Okamoto, R. Oki, K. Sato, M. Satoh, M. W. Shephard, A. Velázquez-Blázquez, U. Wandinger, T. Wehr, and G.-J. van Zadelhoff, (2015), The EarthCARE Satellite: The Next Step Forward in Global Measurements of Clouds, Aerosols, Precipitation, and Radiation. Bull. Amer. Meteor. Soc., 96, 1311–1332. doi: http://dx.doi.org/10.1175/BAMS-D-12-00227.1

Robert Wood, Matthew Wyant, Christopher S. Bretherton, Jasmine Rémillard, Pavlos Kollias, Jennifer Fletcher, Jayson Stemmler, Simone de Szoeke, Sandra Yuter, Matthew Miller, David Mechem, George Tselioudis, J. Christine Chiu, Julian A. L. Mann, Ewan J. O’Connor, Robin J. Hogan, Xiquan Dong, Mark Miller, Virendra Ghate, Anne Jefferson, Qilong Min, Patrick Minnis, Rabindra Palikonda, Bruce Albrecht, Ed Luke, Cecile Hannay, and Yanluan Lin, (2015), Clouds, Aerosols, and Precipitation in the Marine Boundary Layer: An Arm Mobile Facility Deployment.Bull. Amer. Meteor. Soc., 96, 419–440. doi: http://dx.doi.org/10.1175/BAMS-D-13-00180.1

Chandra, A., Zhang, C., Kollias, P., Matrosov, S., and Szyrmer, W, (2015), Automated rain rate estimates using the Ka-band ARM zenith radar (KAZR), Atmos. Meas. Tech., 8, 3685-3699, doi:10.5194/amt-8-3685-2015.

Battaglia, A. and P. Kollias, (2015), Error Analysis of a Conceptual Cloud Doppler Stereoradar with Polarization Diversity for Better Understanding Space Applications. J. Atmos. Oceanic Technol., 32, 1298–1319. doi: http://dx.doi.org/10.1175/JTECH-D-14-00015.1

Maximilian Maahn, Ulrich Löhnert, Pavlos Kollias, Robert C. Jackson, and Greg M. McFarquhar, (2015), Developing and Evaluating Ice Cloud Parameterizations for Forward Modeling of Radar Moments Using in situ Aircraft Observations. J. Atmos. Oceanic Technol., 32, 880–903. doi: 10.1175/JTECH-D-14-00112.1

Gail Skofronick-Jackson, David Hudak, Walter Petersen, Stephen W. Nesbitt, V. Chandrasekar, Stephen Durden, Kirstin J. Gleicher, Gwo-Jong Huang, Paul Joe, Pavlos Kollias, Kimberly A. Reed, Mathew R. Schwaller, Ronald Stewart, Simone Tanelli, Ali Tokay, James R. Wang, and Mengistu Wolde, (2015), Global Precipitation Measurement Cold Season Precipitation Experiment (GCPEX): For Measurement’s Sake, Let It Snow. Bull. Amer. Meteor. Soc., 96, 1719–1741. doi: http://dx.doi.org/10.1175/BAMS-D-13-00262.1

Mechem, D. B., Giangrande, S. E., Wittman, C. S., Borque, P., Toto, T. and Kollias, P. (2015), Insights from modeling and observational evaluation of a precipitating continental cumulus event observed during the MC3E field campaign. J. Geophys. Res. Atmos., 120, 1980–1995. doi: 10.1002/2014JD022255.

Gledhill, D.K., M.M. White, J. Salisbury, H. Thomas, I. Mlsna, M. Liebman, B. Mook, J. Grear, A.C. Candelmo, R.C. Chambers, C.J. Gobler, C.W. Hunt, A.L. King, N.N. Price, S.R. Signorini, E. Stancioff, C. Stymiest, R.A. Wahle, J.D. Waller, N.D. Rebuck, Z.A. Wang, T.L. Capson, J.R. Morrison, S.R. Cooley, and S.C. Doney. (2015). Ocean and coastal acidification off New England and Nova Scotia. Oceanography 28(2), 182–197, http://dx.doi.org/10.5670/oceanog.2015.41

Feng, S., Li, Z., Liu, Y., Lin, W., Zhang, M., Toto, T., … & Endo, S. (2015). Development of fine‐resolution analyses and expanded large‐scale forcing properties: 2. Scale awareness and application to single‐column model experiments. Journal of Geophysical Research: Atmospheres.

Michael J McCann and Dianna K Padilla 2015. Effects of a patchy food environment across life history stages. Journal of Experimental Marine Biology and Ecology 472: 135-141.

Alexander Y. Karatayev, Demetrio Boltovskoy, Lyubov Burlakova and Dianna K. Padilla 2015. Parallels and contrasts between Limnoperna fortunei and species of Dreissena. In: Limnoperna fortunei: the ecology, distribution and control of a swiftly spreading invasive fouling mussel, Demetrio Boltovskoy, Editor. Springer.

Alexander Y. Karatayev, Lyubov E. Burlakova, Sergey E. Mastitsky, and Dianna K. Padilla 2015. Predicting the spread of aquatic invaders: insight from 200 years of invasion by zebra mussels. Ecological Applications 25: 430-440.

Alexander Y. Karatayev, Lyubov E. Burlakova and Dianna K. Padilla. 2015. Zebra versus quagga mussels: a review of their spread, population dynamics, and ecosystem impacts. Hydrobiologia 746: 97-112.

Chapman, D. D., Feldheim, K. A., Papastamatiou, Y. P., & Hueter, R. E. (2015). There and Back Again: A Review of Residency and Return Migrations in Sharks, with Implications for Population Structure and Management. Annual review of marine science, 7, 547-570.

Ashe, J. L., Feldheim, K. A., Fields, A. T., Reyier, E. A., Brooks, E. J., O’Connell, M. T., … & Chapman, D. D. (2015). Local population structure and context-dependent isolation by distance in a large coastal shark. Mar Ecol Prog Ser, 520, 203-216.

Watanabe, Y. Y., Goldman, K. J., Caselle, J. E., Chapman, D. D., & Papastamatiou, Y. P. (2015). Comparative analyses of animal-tracking data reveal ecological significance of endothermy in fishes. Proceedings of the National Academy of Sciences, 201500316.

Brooks, E. J., Brooks, A. M., Williams, S., Jordan, L. K., Abercrombie, D., Chapman, D. D., … & Grubbs, R. D. (2015). First description of deep-water elasmobranch assemblages in the Exuma Sound, The Bahamas. Deep Sea Research Part II: Topical Studies in Oceanography, 115, 81-91.

Fields, A. T., Feldheim, K. A., Poulakis, G. R., & Chapman, D. D. (2015). Facultative parthenogenesis in a critically endangered wild vertebrate. Current Biology, 25(11), R446-R447.

Tettelbach, S. T., B. J. Peterson, J. M. Carroll, B. T. Furman, S. W. T. Hughes, J. Havelin, J. R. Europe, D. M. Bonal, A. J. Weinstock and C. F. Smith. 2015. Aspiring to an Alternative Stable State: Rebuilding of Bay Scallop Populations and Fisheries Following Intensive Restoration. Marine Ecology Progress Series 529: 121-136.

Berry, D. L., J. A. Goleski, F. Koch, C. C. Wall, B. J. Peterson, O. R. Anderson and C. J. Gobler. 2015. Shifts in Cyanobacterial Strain Dominance during Onset of Harmful Algal Blooms in Florida Bay, USA. Molecular Ecology 70: 361-371.

Furman, B. T., L. J. Jackson, E. Bricker and B. J. Peterson. 2015. Sexual recruitment in Zostera marina: a patch to landscape-scale investigation. Limnology and Oceanography 60(2): 584-599.

Carroll, J. M., L. L. Jackson and B. J. Peterson. 2015. The effect of increasing habitat complexity on bay scallop survival in the presence of different decapod crustacean predators. Estuaries and Coasts 38: 1569-1579

Stubler, A. D., A. R. Duckworth and B. J. Peterson. 2015. Sedimentation affects sponge abundance, diversity and distribution on Jamaican coral reefs. Marine Pollution Bulletin 96: 261-270.

Stubler, A. D., B. T. Furman and B. J. Peterson. 2015. Sponge erosion under acidification and warming scenarios: differential impacts on living and dead coral. Global Change Biology 21(11): 4006-4020.

Furman, B. T. and B. J. Peterson. 2015. Sexual Recruitment in Zostera marina: Progress toward a Predictive Model. PLoS ONE 10(9): e0138206.

Trathan, P. N., P. García-Borboroglu, D. Boersma, C.-A. Bost, R. J. M. Crawford, G. T. Crossin, R. J. Cuthbert, P. Dann, L. S. Davis, S. De la Puente, U. Ellenberg, H.J. Lynch, T. Mattern, K. Pütz, P. J. Seddon, W. Trivelpiece, B. Wienecke. 2015. Assessing human impacts on marine systems, especially upon penguin species: how much do we care? Conservation Biology 29(1): 31-41.

Casanovas, P.V., R. Naveen, S. Forrest, J. Poncet, and H.J. Lynch. 2015. A comprehensive coastal seabird survey maps out the front lines of ecological change on the Western Antarctic Peninsula. Polar Biology 38: 927-940.

LaRue, M., G. Kooyman, H.J. Lynch, and P. Fretwell. 2015. Emigration in emperor penguins: Implications for interpretation of long-term studies. Ecography 38: 114-120.

Zhou, X., P. Kollias and E. Lewis, (2015), Clouds, Precipitation, and Marine Boundary Layer Structure during the MAGIC Field Campaign. J. Climate, 28, 2420–2442. doi: http://dx.doi.org/10.1175/JCLI-D-14-00320.1

Zermeno, D., C. Zhang, P. Kollias and H. Kalesse, (2015), Shallow Cloud Moistening in MJO and non-MJO Large-Scale Convective Events over the ARM Manus Site. J. Atmos. Sciences, doi: http://dx.doi.org/10.1175/JAS-D-14-0322.1

Lamer, K., P. Kollias, and L. Nuijens (2015), Observations of the variability of shallow trade wind cumulus cloudiness and mass flux. J. Geophys. Res. Atmos., 120, 6161–6178. doi: 10.1002/2014JD022950.

Marcus van Lier-Walqui, Ann Fridlind, Andrew Ackerman, Scott Collis, Jonathan Helmus, Donald MacGorman Kirk North, Pavlos Kollias and Derek Posselt, (2015), Polarimetric radar signatures of deep convection: characteristics of KDP columns observed during MC3E. Monthly Weather Review 2015; e-View doi: 10.1175/MWR-D-15-0100.1

Jiwen Fan, Yi-Chin Liu, Kuan-Man Xu, Kirk North, Scott Collis, Xiquan Dong, Guang J. Zhang, Qian Chen, Kollias Pavlos, and Steven J. Ghan, (2015), Improving Representation of Convective Transport for Scale-Aware Parameterization – Part I: Convection and Cloud Properties Simulated with Spectral-Bin and Bulk Microphysics. Accepted, Journal of Geophysical Research – Atmospheres

Kneifel, S., A.von Lerber, J. Tiira, D. Moisseev, P. Kollias, and J. Leinonen (2015), Observed relations between snowfall microphysics and triple-frequency radar measurements. J. Geophys. Res. Atmos., 120, 6034–6055. doi:10.1002/2015JD023156.

Jensen, M., et al., (2015), The Midlatitude Continental Convective Clouds Experiment (MC3E). Accepted to the Bulletin of the American Meteorological Society

Gownaris NJ, Pikitch EK, Ojwang WO, Michener R, Kaufman L (2015) Predicting Species’ Vulnerability in a Massively Perturbed System: The Fishes of Lake Turkana, Kenya. PLoS ONE 10(5): e0127027. doi:10.1371/journal.pone.0127027

Lin, W., Liu, Y., Vogelmann, A. M., Fridlind, A., Endo, S., Song, H., … & Zhang, M. (2015). RACORO Continental Boundary Layer Cloud Investigations. Part III: Separation of Parameterization Biases in Single‐Column Model CAM5 Simulations of Shallow Cumulus. Journal of Geophysical Research: Atmospheres.

Price, R. E., LaRowe, D. E., Italiano, F., Savov, I., Pichler, T., & Amend, J. P. (2015). Subsurface hydrothermal processes and the bioenergetics of chemolithoautotrophy at the shallow-sea vents off Panarea Island (Italy). Chemical Geology, 407, 21-45.

Engel, B.E; Hallock, P; Price, R.E.; and Pichler, T. (2015). Shell dissolution in larger benthic foraminifers exposed to pH and temperature extremes: Results from an in situ experiment. Journal of Foraminiferal Research. 45 (2).

Dasgupta, S., Huang, I.J., and McElroy A. E. 2015. Hypoxia enhances the toxicity of Corexit EC9500A and CEWAFs prepared with Louisiana Sweet Crude Oil (MD-242) to sheepshead minnow (Cyprinodon variegatus) larvae. PLoS One. DOI:10.1371/journal.pone.0128939.

Romany, J.S., McElroy A.E., and Fast, M. 2015. Measures of immune system status in young-of-the-year winter flounder (Pseudopleuronectes americanus) from Long Island coastal bays. J. Fish. Biol. 86:148-161.

K. Park*, L. K. Emmons, Z. Wang and J. E. Mak, Joint Application of Concentration and δ18O to Investigate the Global Atmospheric CO Budget, Atmosphere, 6, 547-578; doi:10.3390/atmos6050547, 2015.

K. Park*, Z. Wang, L. K. Emmons, J. E. Mak, Variation of atmospheric CO, δ13C and δ18O at high northern latitude during 2004-2009: observations and model simulations, J. Geophys.Res.-Atmos., 120, 11,024–11,036, doi:10.1002/2015JD023191, 2015.

P.K. Misztal et al., inc. J.E. Mak, Atmospheric benzenoid emissions from plants rival those from fossil fuel, Nature Sci. Rep., 5, 12064, 2015.

L. Su*, E. G. Patton, J. Vilà-Guerau de Arellano, A. B. Guenther, L. Kaser, B. Yuan, F. Xiong, P. B. Shepson, L. Zhang, D. O. Miller, W. H. Brune, K. Baumann, E. Edgerton, A. Weinheimer, and J. E. Mak, Understanding isoprene photo-oxidation using observations and modeling over a subtropical forest in the Southeast US, Atmos. Chem. Phys. Discuss., 15, 31621-31663, doi:10.5194/acpd-15-31621-2015, 2015.

Thalman, R., Baeza-Romero, M. T., Ball, S. M., Borrás, E., Daniels, M. J. S., Goodall, I. C. A., Henry, S. B., Karl, T., Keutsch, F. N., Kim, S., Mak, J., Monks, P. S., Muñoz, A., Orlando, J., Peppe, S., Rickard, A. R., Ródenas, M., Sánchez, P., Seco, R., Su, L., Tyndall, G., Vázquez, M., Vera, T., Waxman, E., and Volkamer, R.: Instrument intercomparison of glyoxal, methyl glyoxal and NO2 under simulated atmospheric conditions, Atmos. Meas. Tech., 8, 1835-1862, doi:10.5194/amt-8-1835-2015, 2015.

Yoo, C., S. Park, D. Kim, J. H. Yoon, and H. M. Kim, 2015: Boreal winter MJO teleconnection in the Community Atmosphere Model version 5 with the Unified Convection parameterization, J. Climate, 28, 8135-8150

Thorne, L. H., E. L. Hazen, S.J. Bograd, D.G. Foley, M.G. Conners, M.A. Kappes, H. M. Kim, Y. Tremblay, D.P. Costa, and S.A. Shaffer, 2015: Foraging behavior links climate variability and reproduction in North Pacific albatrosses, Movement Ecology, 3:27, DOI: 10.1186/s40462-015-0050-9

Yu, J. 2015 Erratum for “Approximations of the Dispersion Relationship of Water Waves” by J. Yu. J. Eng. Mech., 141(7) . doi: 10.1061/(ASCE)EM.1943-7889.0000941

Yu, J. and Chen, S. 2015 Hydrodynamic instability mechanism for rip currents. Studies in Applied Mathematics. 135: 196-223. doi: 10.1111/sapm.12074

Weidman, P., Herczynski, A., Yu, J. and Howard, L. N. 2015 Experiments on normal modes in a tank with corrugated bottom. J. Fluid Mech., 777: 122-150. doi:10.1017/jfm.2015.318

Carlisle AB, Goldman KJ, Litvin SY, Madigan DJ, Bigman JS, Swithenbank AM, Kline Jr TC & BA Block. 2015. Stable isotope analysis of salmon shark vertebrae reveals ontogenetic changes in habitat in a pelagic shark. Proceedings Royal Society B 282: 20141446.

Madigan DJ. 2015. Understanding bluefin migration using intrinsic tracers in tissues in T. Kitagawa & S. Kimura (Eds.), Biology & Ecology of Bluefin Tuna. Boca Raton, FL: CRC Press.

Carlisle AB, Litvin SY, Hazen EL, Madigan DJ, Goldman KJ, Lea RN & BA Block. 2015. Reconstructing habitat use by juvenile salmon sharks links upwelling to strandings in the California Current. Marine Ecology Progress Series 525: 217-228.

Lyons K, Preti A, Madigan DJ, Wells RJD, Blasius ME, Snodgrass OE, Kacev D, Harris JD, Dewar H, Kohin S, MacKenzie K & CG Lowe. 2015. Insights into the life history and ecology of a large shortfin mako shark (Isurus oxyrinchus) captured in southern California. Journal of Fish Biology. DOI:10.1111/jfb.12709.

Madigan DJ, Brooks EJ, Bond ME, Gelsleichter J, Howey LA, Abercrombie DL, Brooks A & DD Chapman. 2015. Diet shift and associated site-fidelity of oceanic whitetip sharks (Carcharhinus longimanus) along the edge of the Great Bahama Bank. Marine Ecology Progress Series 529: 185-197. DOI: 10.3354/meps11302.

Madigan DJ, Carlisle AB, Gardner LD, Jayasundara N, Micheli F, Schaefer KM, Fuller DW & BA Block. 2015. Assessing niche width of endothermic fish from genes to ecosystem. PNAS 112(27): 8350-8355.

Harris, C.M., K. Lorenz, L.D.C. Fishpool, B. Lascelles, J. Cooper, N. Coria, J.P. Croxall, L.M. Emmerson, R. Fijn, P. Jouventin, M.A. LaRue, Y. Le Maho, H.J. Lynch, R. Naveen, S. Poncet, R.A. Phillips, C.J. Southwell, J.A. van Franeker, H. Weimerskirch, B. Wienecke, and E.J. Woehler. 2015. Important Bird Areas in Antarctica Summary 2015. BirdLife International and Environmental Research & Assessment Ltd., Cambridge.

Rona, P., V. Guida, M.I. Scranton, D. Gong, L. Macelloni, M. Pierdomenico, A. Diercks, V. Asper, and S. Haag. 2015. Hudson submarine canyon head offshore New York and New Jersey: A physical and geochemical investigation of a fertile habitat space. Deep-Sea Research II, 121, 213-232. http://dx.doi.org/10.1016/j/dsr2.2015.07.019

Pierdomenico, M., V.G. Guida, L. Macelloni, F.L. Chiocci, P.A. Rona, M.I. Scranton, V. Asper and A. Diercks. 2015. Sedimentary facies, geomorphic features and habitat distribution at the Hudson Canyon head from AUV multibeam data. Deep-Sea Research II, 121, 112-125. http://dx.doi.org/10.1016/j.dsr2.2015.04.016.

Rodriguez-Mora, M, M.I. Scranton, G.T. Taylor, and A.Y. Chistoserdov. 2015. The dynamics of the bacterial diversity in the redox transition and anoxic zones of the Cariaco Basin assessed by parallel tag sequencing. FEMS Microbiology Ecology, 91(9), fiv088. doi:10.1093/femsec/fiv088.

Pershing, A. J., M. A. Alexander, C. M. Hernandez, L. A. Kerr, A. Le Bris, K. E. Mills, J. A. Nye, N. R. Record, H. A. Scannell, J. D. Scott, G. D. Sherwood, A. C. Thomas. (2015) Slow adaptation in the face of rapid warming leads to the collapse of an iconic fishery. Science 350 (6262): 809-812.

Tommasi, D., J.A. Nye, C. Stock, J. Hare, M. Alexander, K. Drew (2015) Effect of environmental conditions on river herring freshwater survival: a coastwide perspective. Canadian Journal of Fisheries and Aquatic Sciences 72(7): 1037-1047.

Levinton, J., Lord, S., Higeshide. 2015, Are crabs stressed for water on a hot sand flat? Water loss and field water state of two species of intertidal fiddler crabs. J. Exp. Mar. Biol. Ecol. 469: 57-62.

Sebastiano, D., Levinton, J., Doall, M., Kamath, S. 2015, Using a shellfish harvest strategy to extract high nitrogen inputs in coastal bays: Practical and economic implications. Journal of Shellfish Research, 34: 573-583.

Gillett, David, J., Stephan B. Weisberg, Treda Grayson, Anna Hamilton, Virginia Hansen, Erik W. Leppo, Marguerite C. Pelletier, Angel Borja, Donald Cadien, Daniel Dauer, Robert Diaz, Margaret Dutch, Jeffery L. Hyland, Michael Kellog, Peter Larsen, Jeffrey Levinton, Roberto Llansó, Lawrence L. Lovel, Paul Montagna, Dean Pasko, Charles A. Phillips, Chet Rakocinski, J. Ananda Ranasinghe, Denise M. Sanger, Heliana Teixeira, Robert F. Van Dolah, Ronald G. Velarde, and Kathy I. Welch. 2015, Effect of ecological group classification schemes on performance of the AMBI benthic index in US coastal waters Ecological Indicators, 50: 99-107.

Cahill, A. E. and Levinton, J. S. 2015, Genetic differentiation and reduced genetic diversity at the northern range edge of two species with different dispersal modes. Mol Ecol. Accepted Author Manuscript. doi:10.1111/mec.13497

Vogelmann, A. M., Fridlind, A. M., Toto, T., Endo, S., Lin, W., Wang, J., … Zhang, MH & Khairoutdinov, M. (2015). RACORO Continental Boundary Layer Cloud Investigations. Part I: Case Study Development and Ensemble Large‐Scale Forcings. Journal of Geophysical Research: Atmospheres.

Alfaro, D. A., & Khairoutdinov, M. (2015). Thermodynamic constraints on the morphology of simulated midlatitude squall lines. Journal of the Atmospheric Sciences, (2015).

Liu, P., Zhang, Q., Zhang, C., Zhu, Y., Khairoutdinov, M., Kim, H. M., … & Zhang, M. (2015). A Revised Real-Time Multivariate MJO Index. Monthly Weather Review, (2015).

Dheilly NM, Duval D, Mouahid G, Emans R, Allienne J-F, Genthon C, Dubois E, Du Pasquier L, Adema C, Grunau C, Mitta G, and Gourbal B. (2015). Diverse Immunoglobulin-like domain containing lectins in the snail Biomphalaria glabrata. Journal of Developmental and Comparative Immunology 48(1): 234-243

Dheilly NM, Maure F, Ravallec M, Galinier R, Doyon J, Duval D, Leger L, Volkoff A-N, Misse D, Nidelet S, Demolomb V, Brodeur J, Gourbal B, Thomas F, Mitta G. (2015). Who is the puppet master? Replication of a parasitic wasp-associated virus correlates with host behavior manipulation. Proceedings of the Royal Society B Biological Sciences 282(1803) http://rspb.royalsocietypublishing.org/content/282/1803/20142773

Harke, M. J., Davis, T. W., Watson, S. B., & Gobler, C. J. (2015). Nutrient-controlled niche differentiation of western Lake Erie cyanobacterial populations revealed via metatranscriptomic surveys. Environmental science & technology.

Rachel E O’Brien, Bingbing Wang, Alexander Laskin, Nicole Riemer, Matthew West, Qi Zhang, Yele Sun, Xiao‐Ying Yu, Peter Alpert, Daniel A Knopf, Mary K Gilles, Ryan C Moffet (2015). Chemical imaging of ambient aerosol particles: Observational constraints on mixing state parameterization. Journal of Geophysical Research: Atmospheres, 120(18), 9591-9605.

Andrea M. Arangio, Jonathan H. Slade, Thomas Berkemeier, Ulrich Pöschl, Daniel A. Knopf, Manabu Shiraiwa (2015). Multiphase Chemical Kinetics of OH Radical Uptake by Molecular Organic Markers of Biomass Burning Aerosols: Humidity and Temperature Dependence, Surface Reaction, and Bulk Diffusion, J. Phys. Chem. A, 119, 4533−4544.

Sessa, J. A., E. Larina, K. Knoll, M. Garb, J. K. Cochran, B. T. Huber, K. G. MacLeod, and N. H. Landman (2015) Ammonite habitat revealed via isotopic composition and comparisons with co-occurring benthic and planktonic organisms. Proceedings Nat. Acad. Sci. DOI 10.1073/pnas.1507554112.

Landman, N. H., J. C. Grier, J. W. Grier, J. K. Cochran, and S. M. Klofak (2015) 3-D orientation and distribution of ammonites in a concretion from the Upper Cretaceous Pierre Shale of Montana. Swiss J Palaeontol. DOI 10.1007/s13358-015-0084-z.

Cochran, J. K., N. H. Landman, N. L. Larson, K. C. Meehan, M. Garb, and J. Brezina (2015) Geochemical evidence (C and Sr isotopes) for methane seeps as ammonite habitats in the Late Cretaceous (Campanian) Western Interior Seaway. Swiss J Palaeontol. DOI 10.1007/s13358-015-0087-9.

Lamer, K., and P. Kollias (2015), Observations of fair-weather cumuli over land: Dynamical factors controlling cloud size and cover, Geophys. Res. Lett., 42, 8693–8701, doi:10.1002/2015GL064534

Lipton D., Lew D.K., Wallmo K., Wiley P.C., and Dvarskas A. (2015) The evolution of non-market valuation of U.S. Coastal and Marine Resources. Journal of Ocean and Coastal Economics. Article 6. Available at: http://cbe.miis.edu/joce/vol2014/iss1/6/.

Qian, Y., Feng, H., Gallagher, F. J., Zhu, Q., Wu, M., Liu, C.J., Jones, K.W., and Tappero, R.V. (2015). Synchrotron study of metal localozation in Typha latifolia L. root sections. Journal of Synchrotron Radiation. 22: 1459-1468.

Han J, McBean C, Wang L, Hoy J, Jaye C, Liu H, Li Z-Q, Sfeir M, Fischer D, Taylor G, Misewich J, Wong SS. 2015. Probing structure-induced optical behavior in a new class of self-activated luminescent 0D/1D CaWO4 metal oxide – CdSe nanocrystal composite heterostructures. Chem Materials 27: 778−792.

McParland, E, Benitez-Nelson CR, Taylor GT, Rollings A, Lorenzoni L. 2015. Cycling of suspended particulate phosphorus across the redoxcline of the Cariaco Basin. Mar. Chem. 176: 64-74.

Thorne, L. H., Hazen, E. L., Bograd, S. J., Foley, D. G., Conners, M. G., Kappes, M. A., … & Shaffer, S. A. (2015). Foraging behavior links climate variability and reproduction in North Pacific albatrosses. Movement Ecology, 3(1), 1-15.

Wehrmann, L.M., Titschack, J., Böttcher, M.E., and Ferdelman, T.G., 2015. Linking sedimentary sulfur and iron biogeochemistry to growth patterns of a cold-water coral mound in the Porcupine Basin, S.W. Ireland (IODP Expedition 307). Geobiology 13, 424-442.

Zhou, L., Zhang, M., Bao, Q., & Liu, Y. (2015). On the incident solar radiation in CMIP5 models. Geophysical Research Letters, 42(6), 1930-1935.

Tang, S., & Zhang, M. (2015). Three‐dimensional constrained variational analysis: Approach and application to analysis of atmospheric diabatic heating and derivative fields during an ARM SGP intensive observational period. Journal of Geophysical Research: Atmospheres.

Zhou, X-H, D-P. Wang, and D. Chen, 2015a. Global wavenumber spectrum with corrections for altimeter high-frequency noise. J. Phys. Oceanogr., 45(2), 495-503.

Xu, N., Tang, Y. Z., Qin, J., Duan, S., & Gobler, C. J. (2015). Ability of the marine diatoms Pseudo-nitzschia multiseries and P. pungens to inhibit the growth of co-occurring phytoplankton via allelopathy. Aquat Microb Ecol, 74, 29-41.

Park, B. S., Kim, J. H., Kim, J. H., Gobler, C. J., Baek, S. H., & Han, M. S. (2015). Dynamics of bacterial community structure during blooms of Cochlodinium polykrikoides (Gymnodiniales, Dinophyceae) in Korean coastal waters. Harmful Algae, 48, 44-54.

Hodell, D., Lorens., L., Crowhurst, S., Konijnendijk, T., Tjallingii, R., Jimenez-Espejo, F., Skinner, L., Tzedakis, P.C. and Shackelton Site Project Members (includes Flood, R.D.), 2015. A reference time scale for Site U1385 (Shackleton Site) on the SW Iberian Margin. Global and Planetary Change, 133, 49-64.

Goff, J.A., Flood, R.D., Austin., J.A., Jr., Schwab, W.C., Christensen, B., Browne, C.M., Denny, J.F. and Baldwin, W.E., 2015. The Impact of Hurricane Sandy on the Shoreface and Inner Shelf of Fire Island, New York: Large Bedform Migration and Limited Erosion. Continental Shelf Research, 98, 13-25.

Fritts, D. C., L. Wang, M. A. Geller, D. A. Lawrence, J. Werne, B. B. Balsley (2015), Numerical Modeling of Multi-Scale Dynamics at a High Reynolds Number: Instabilities, Turbulence, and an Assessment of Ozmidov and Thorpe Scales. J. Atmos. Sci., doi: http://dx.doi.org/10.1175/JAS-D-14-0343.1

Chennu, A., Volkenborn, N., de Beer, D., Wethey, D. S., Woodin, S. A., & Polerecky, L. (2015). Effects of Bioadvection by Arenicola marina on Microphytobenthos in Permeable Sediments. PLOS ONE, 10(7), e0134236.

Becker, K. N., & Warren, J. D. (2015). Material properties of Pacific hake, Humboldt squid, and two species of myctophids in the California Current. The Journal of the Acoustical Society of America, 137(5), 2522-2532.

Rountos, K. J., Frisk, M. G., & Pikitch, E. K. (2015) Are We Catching What They Eat? Moving Beyond Trends in the Mean Trophic Level of Catch. Fisheries, 40(8): 376-385.

Chow, J.S., C. Lee, A. Engel (2015). The influence of extracellular polysaccharides, growth rate, and free coccoliths on the coagulation efficiency of Emiliania huxleyi. Marine Chemistry, 175: 5-17, doi.org/10.1016/j.marchem.2015.04.010.

Cisternas Novoa, C., C. Lee, A. Engel (2015). Transparent exopolymer particles (TEP) and Coomassie stainable particles (CSP): Differences between their origin and vertical distributions in the ocean. Marine Chemistry, 175: 56-71, doi.org/10.1016/j.marchem.2015.03.009.

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Bluestein, Howard B., J. B. Houser, M. M. French, J. C. Snyder, G. D. Emmitt, I. PopStefanija, C. A. Baldi, and R. T. Bluth, (2014). Observations of the boundary layer near tornadoes and in supercells using a mobile, co-located, pulsed Doppler lidar and radar. J. Atmos. Oceanic Technol., 31, 302-325.

French, Michael M., H. B. Bluestein, I. PopStefanija, C. A. Baldi, and R. T. Bluth, (2014). Mobile, phased-array, Doppler radar observations of tornadoes at X band. Mon. Wea. Rev., 142, 1010-1036.

Skinner, Patrick S., C. C. Weiss, M. M. French, H. B. Bluestein, P. M. Markowski, and Y. P. Richardson, (2014). VORTEX2 observations of a low-level mesocyclone with multiple internal rear-flank downdraft momentum surges in the 18 May 2010 Dumas, Texas supercell. Mon. Wea. Rev., 142, 2935-2960.

Dietrich, D. E., Bowman, M. J., Korotenko, K. A., & Bowman, M. H. E. (2014). Oil Spill Risk Management: Modeling Gulf of Mexico Circulation and Oil Dispersal. John Wiley & Sons.

Garcia-Orellana, J., Cochran, J. K., Bokuniewicz, H., Daniel, J. W. R., Rodellas, V., & Heilbrun, C. (2014). Evaluation of 224Ra as a tracer for submarine groundwater discharge in Long Island Sound (NY). Geochimica et Cosmochimica Acta 114, 314-330.

Koch, F., Burson, A., Tang, Y. Z., Collier, J. L., Fisher, N. S., Sañudo-Wilhelmy, S., & Gobler, C. J. (2014). Alteration of plankton communities and biogeochemical cycles by harmful Cochlodinium polykrikoides (Dinophyceae) blooms. Harmful Algae, 33(0), 41-54. doi: http://dx.doi.org/10.1016/j.hal.2014.01.003

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Chang, E.K.M., 2014: Impacts of background field removal on CMIP5 projected changes in Pacific winter cyclone activity, J. Geophys. Res. Atmos., 119, 4626-4639, doi:10.1002/2013JD020746.

Xia, X.*, and E.K.M. Chang, 2014: Diabatic damping of zonal index variations, J. Atmos. Sci., 71, 3090-3105, doi:10.1175/JAS-D-13-0292.1.

Doherty, O. M., Riemer, N., & Hameed, S. (2014). Role of the convergence zone over West Africa in controlling Saharan mineral dust load and transport in the boreal summer. Tellus B, 66.

Wallace, R. B., Baumann, H., Grear, J. S., Aller, R. C., & Gobler, C. J. (2014). Coastal ocean acidification: The other eutrophication problem. Estuarine, Coastal and Shelf Science.

del Castillo C, Allam B. (2014). A comparative genomics analysis of the T3SS2α pathogenicity island of Vibrio parahaemolyticus. Journal of Shellfish Research 33(2): 550

Wang K, Pales Espinosa E, Allam B. (2014). Effect of “heat shock” treatments on QPX disease in the hard clam, Mercenaria mercenaria. Journal of Shellfish Research 33(2): 661.

Wang K, Del Castillo C, Pales Espinosa E, Allam B. (2014). Clam focal and systemic immune responses to QPX revealed by RNA-Seq technology. Journal of Shellfish Research 33(2): 661.

Rubin E, Pales Espinosa E, Koller A, Allam B. (2014). Extracellular proteins in quahog parasite unknown (QPX) mucoid secretion. Journal of Shellfish Research 33(2): 648.

Rubin E, Tanguy A, Pales Espinosa E, Allam B. (2014). Differential gene expression in quahog parasite unknown (QPX) in response to clam factors and transcriptomic profiling of five QPX isolates. Journal of Shellfish Research 33(2): 647-648.

Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, et al. (2014). The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. PLoS Biology, 12(6), e1001889.

Rosa M, Ward E, Shumway S, Wikfors G, Pales Espinosa E, Allam B. (2014). Examining seasonal shifts in retention efficiency and mucosal composition in the blue mussel Mytilus edulis. Journal of Shellfish Research 33(2): 647.

Allam B., Corre E, Pales Espinosa E. (2014). Pallial mucus of Crassostrea virginica regulates the expression of putative virulence genes of its pathogen Perkinsus marinus. Journal of Shellfish Research 33(2): 586.

Allam, B., Pales Espinosa, E., Tanguy, A., Jeffroy, F., Le Bris, C., Paillard, C. 2014. Transcriptional changes in manila clam (Ruditapes philippinarum) in response to brown ring disease. Fish and Shellfish immunology. 41, 2-11.

Rubin E, Tanguy A, Perrigault M, Pales Espinosa E, Allam B. (2014). Characterization of the transcriptome and temperature-induced differential gene expression of in quahog parasite unknown QPX, the thraustochytrid parasite of hard clams. BMC Genomics 15: 245.

Pales Espinosa E, Koller T, Allam B. (2014). Shotgun proteomic characterization of the pallial mucus of the oyster Crassostrea virginica. Journal of Shellfish Research 33(2): 640.

Dahl S, Barnes D, Allam B. (2014). QPX disease relationships with environmental parameters monitored over a decade in a Raritan Bay (NY) hard clam fishery. Journal of Shellfish Research 33(2): 599-600.

Pales Espinosa E., Allam B. (2014). Food quality and season affect the expression of the mucosal lectin MeML and food sorting abilities in the blue mussel Mytilus edulis. Journal of Shellfish Research 33(2): 639-640.

Pales Espinosa E., Corre E, Allam B. (2014). Pallial mucus of Crassostrea virginica regulates the expression of putative virulence genes of its pathogen Perkinsus marinus. International Journal for Parasitology 44: 305-317.

Beaupré, S. R. (2014). Chapter 6: The isotopic composition of marine DOC, in Biogeochemistry of Marine Dissolved Organic Carbon, 2nd Edition, edited by D. A. Hansell and C. A. Carlson, pp. 335-368, Academic Press, U.K.

Geers, T.M., E.K. Pikitch, M.G. Frisk (In Press-online February 5, 2014). An Original Model of the Northern Gulf of Mexico using Ecopath with Ecosim and its Implications for the Effects of Fishing on Ecosystem Structure and Maturity. Deep Sea Research Part II: Topical Studies in Oceanography.

Newman, E. T. Biography of a Hacienda: Work and Revolution in Rural Mexico. 2014 University of Arizona Press.

Newman, E. T. Biography of a Hacienda: Work and Revolution in Rural Mexico. 2014 University of Arizona Press.

Dietrich, D. E., Bowman, M. J., Korotenko, K. A., & Bowman, M. H. E. The 2010 Deep Water Horizon and 2002 Supertanker Prestige Accidents. Oil Spill Risk Management: Modeling Gulf of Mexico Circulation and Oil Dispersal, 1-8.

Dietrich, D. E., Bowman, M. J., Korotenko, K. A., & Bowman, M. H. E. The 2010 Deep Water Horizon and 2002 Supertanker Prestige Accidents. Oil Spill Risk Management: Modeling Gulf of Mexico Circulation and Oil Dispersal, 1-8.

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Taylor, D. (2013). The Log from the Sea of Cortez: A Poem Series. San Antonio, TX: Wings Press.

Taylor, D. (2013). The Log from the Sea of Cortez: A Poem Series. San Antonio, TX: Wings Press.

Archer, C. L., Colle, B. C., Monache, L., Dvorak, M. J., Lundquist, J., Bailey, B. H., … & Zack, J. 2013: Meteorology for coastal/offshore wind energy in the United States: recommendations and research needs for the next 10 years. Bulletin of the American Meteorological Society.

Okubo, A., & Levin, S. A. (2013). Diffusion and ecological problems: modern perspectives (Vol. 14). Springer Science & Business Media.

Okubo, A., & Levin, S. A. (2013). Diffusion and ecological problems: modern perspectives (Vol. 14). Springer Science & Business Media.

Aerts, J., Botzen, W., Bowman, M., Dircke, P. and Ward, P., 2013. Climate adaptation and flood risk in coastal cities. Routledge.

Aerts, J., Botzen, W., Bowman, M., Dircke, P. and Ward, P., 2013. Climate adaptation and flood risk in coastal cities. Routledge.

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D. Hill, M.J. Bowman, and J.S. Khinda (eds.). 2012. Storm Surge Barriers to Protect New York City: Against the Deluge, Amer. Soc. Civil Eng., pp. 259.

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Aerts, J., D.C. Major, M.J. Bowman, P. Dierke, M.A. Marfai. 2009. Connecting Delta Cities. VU University Press, Amsterdam, pp. 91.

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Camhi, M. D., E. K. Pikitch and E. A. Babcock, editors. 2008. Sharks of the Open Ocean: Biology, Fisheries and Conservation. Blackwell Publishing, Oxford, UK. 536 p.

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2016 Publications

by | Jan 1, 2016

Allam, Bassem Liu, Q., Collier, J. L., & Allam, B. (2016). Seasonality of QPX disease in the Raritan Bay (NY) wild hard clam (Mercenaria mercenaria) population. Aquaculture Research. Aller, Josie Aller, Robert Beaupré, Steven Soulet, G., Skinner, L. C., Beaupré,...

2015 Publications

by | Jan 5, 2015

Allam, Bassem Wang, K., Espinosa, E. P., Tanguy, A., & Allam, B. (2015). Alterations of the immune transcriptome in resistant and susceptible hard clams (Mercenaria mercenaria) in response to Quahog Parasite Unknown (QPX) and temperature. Fish & Shellfish...

2014 Publications

by | Jan 10, 2014

Allam, Bassem Rubin, E., Espinosa, E. P., Koller, A., & Allam, B. (2014). Characterization of the secretome of the clam parasite, QPX. International Journal for Parasitology. Raghuvanshi, D. S., Kumari, K., Allam, B. K., & Singh, K. N. (2014). A convenient and...

2013 Publications

by | Jan 10, 2013

Allam, Bassem Allam B. , Carden WE, Ward JE, Ralph G, Winnicki S, Pales Espinosa E. (2013). Early host-pathogen interactions in marine bivalves: Evidence that the alveolate parasite Perkinsus marinus infects through the oyster mantle during rejection of pseudofeces....

2012 Publications

by | Jan 10, 2012

Allam, Bassem Allam B. 2012. Development of strategies to mitigate QPX disease in the hard clam Mercenaria mercenaria. Journal of Shellfish Research 31(1): 207-207. Sokolowski, M.S., B.A. Allam, K.J. Dunton, M.A. Clark, E.B. Kurtz and M.D.Fast. 2012. Immunophysiology...

2011 Publications

by | Jan 10, 2011

Allam, Bassem Rosa, M.E., J.E. Ward, S.E. Shumway, G.H. Wikfors, B.A. Holohan, E. Pales-Espinosa and B. Allam. 2011. The role of particle surface properties on feeding selectivity by Eastern oysters, Crassostrea virginica, and blue mussels, Mytilus edulis. Journal of...

2010 Publications

by | Jan 10, 2010

Allam, Bassem Pales Espinosa, E., M. Perrigault and B. Allam. 2010. Identification and molecular characterization of a mucosal lectin (MeML) from Mytilus edulis and its potential role in particle capture. Comparative Biochemistry and Physiology 156: 495-501....

2009 Publications

by | Jan 10, 2009

Allam, Bassem Perrigault M., A. Tanguy and B. Allam. 2009. Indentification and quantification of differentially expressed genes in the hard clam, Mercenaria mercenaria, in response to quahog parasite unknown (QPX). BMC Genomics 10: 377. doi:10.1186/1471-2164-10-377...

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